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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0017
         (669 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar...    32   0.086
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ...    28   1.1  
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ...    28   1.4  
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p...    27   1.8  
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha...    27   2.4  
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch...    27   2.4  
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy...    27   3.2  
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|...    27   3.2  
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch...    26   4.3  
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa...    26   4.3  
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos...    26   4.3  
SPAC926.02 |||conserved fungal protein|Schizosaccharomyces pombe...    26   5.6  
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo...    26   5.6  
SPBC354.09c |||Tre1 family protein |Schizosaccharomyces pombe|ch...    25   7.5  
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch...    25   7.5  
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p...    25   7.5  
SPCC569.08c |ade5|ade8|phosphoribosylglycinamide formyltransfera...    25   9.9  

>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 289

 Score = 31.9 bits (69), Expect = 0.086
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
 Frame = +2

Query: 350 ATKEALDAKMETXEEKREAYINELRSRLKDHLEGVEKTRLTLEQ--QTAEVYKAIKIR*P 523
           A +E      +  +E +EA +NE R  L+  LEG ++    L++  Q  + YK  + R  
Sbjct: 5   AVRERRQFIYKRNQELQEAKLNEKRRALRKALEGNKELNKDLQEDSQLQKDYKYDESRAT 64

Query: 524 QLPTSGDENLKKMIERLREHEXQVSQGPRRQP 619
           Q  T  + NL     RL E E +V     R+P
Sbjct: 65  QEET--ETNLDDEYHRLGEREPKVLVTTSREP 94


>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1420

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +3

Query: 63   AMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQE 221
            A+  ETKST     ++  GG A    +A P  +P P    +P   P+ E +++
Sbjct: 867  AITPETKST---VNQIMSGGEALAAPVAVPAPIPAPVAEPAPPAAPAKEVVEK 916


>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 3655

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 12   SSDAIQLFRSLCRLKVEAMEVETKSTEIRCQEMSKGGLAYE 134
            S D   L+  L R +   +E E  ++  +C E  K  L YE
Sbjct: 2534 SLDEHDLYHGLWRRRANFLETEVATSHEQCHEWEKAQLVYE 2574


>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 275

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 20/75 (26%), Positives = 31/75 (41%)
 Frame = +1

Query: 355 QGGSRRQDGDPXGKTRGLHQRAALPSQGSS*GR*EDQVDPGTADRGSVQGHQDKMTTAAD 534
           +GG R + G   G +  L  R+  P +  S     D+     +DR S+       + + D
Sbjct: 96  RGGRRERGGRVHGDSGRLRSRSPSPHEARSRSPYNDE----RSDRRSMSPRYRSRSRSPD 151

Query: 535 KRRREPQEDDRASAR 579
            R R P  D R+  R
Sbjct: 152 GRSRSPDYDRRSPKR 166


>SPBC146.03c |cut3|smc4, smc4|condensin subunit
           Cut3|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1324

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = +2

Query: 410 INELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIKIR*PQLPTSGDENLKKMIERL 574
           + E  +++K+     +KTR + EQQT ++ + +K        + ++ LKK IE L
Sbjct: 410 LREKAAKVKNDCTSEKKTRQSYEQQTVKIEEQLKFL-----LNKEKKLKKSIEAL 459


>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1208

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +2

Query: 359 EALDAKMETXEEKREAYINELRSRLKDHLEGVEKTRLTLEQ 481
           E L  K+++  ++++  INEL  R+K +   V +   T+++
Sbjct: 530 EGLTLKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDE 570


>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1115

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
 Frame = +2

Query: 326 EQTNNFIVATKEA-LDAKMETXEEKREAYINELRSRLKDHLEGVEKTRLTLE-QQTAEVY 499
           +Q     VA     ++A +E    K E + + + SR+K   + +E TRL  + Q   E Y
Sbjct: 460 KQVEELTVALNSGKMNAIVEAESSKNELWDSMMVSRMKTQEQSIELTRLYKQLQDIEEDY 519

Query: 500 KAIKIR*PQLPTSGDENLKKMIERLRE 580
           +   +R  Q      + L++ +E + +
Sbjct: 520 ENKLMRMEQQWREDVDQLQEYVEEITQ 546


>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 397

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 135 VILAEPVGVPVPRRADSPEKTPSVEEIQEKLI 230
           V L +P+  P P  A+S + T S E++  +LI
Sbjct: 182 VSLPQPIAAPAPPSAESSKSTISDEDVAWQLI 213


>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1822

 Score = 26.2 bits (55), Expect = 4.3
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 18  DAIQLFRSLCRLKVEAMEVETKSTEIRCQEM 110
           DA  +FRS+CRL V     + K + IR Q M
Sbjct: 388 DAFLVFRSMCRLAVRQTSPD-KVSNIRSQAM 417


>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1628

 Score = 26.2 bits (55), Expect = 4.3
 Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
 Frame = +1

Query: 367  RRQDGDPXGKTRGLHQRAALPS--QGSS*GR*EDQV-DPGTADRGSVQGHQDKMTTAADK 537
            RR+   P G  R L  R       Q S     EDQ  D     R     + D + + +  
Sbjct: 1389 RRRKTTPEGNRRALRTRTPTNEDIQRSDSKLREDQSRDRTPQSRSFTNENNDNLRSVSRH 1448

Query: 538  RRREPQEDDRASAR 579
             RREPQ+    +AR
Sbjct: 1449 TRREPQQAQNLNAR 1462


>SPAC20G8.05c |cdc15||cell division control protein
           Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 927

 Score = 26.2 bits (55), Expect = 4.3
 Identities = 11/57 (19%), Positives = 30/57 (52%)
 Frame = +2

Query: 332 TNNFIVATKEALDAKMETXEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 502
           T N I++ +    +  +  EE  +    ELR++++++++  E+ ++       E+Y+
Sbjct: 85  TLNNILSMRTETGSMAKAHEEVSQQINTELRNKIREYIDQTEQQKVVAANAIEELYQ 141


>SPAC926.02 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 443

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 186 PEKTPSVEEIQEKLIAAEERRRSWKL 263
           P+K P+V+E+ E  I  EE    W+L
Sbjct: 19  PKKNPTVDELFEIAIDLEESGDRWRL 44


>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
           Wis4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1401

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = +2

Query: 326 EQTNNFIVATKEALDAKMETXEEKREAY-INELRSRLKDHLEGVEKTRLTLEQQTAEVYK 502
           EQ   F ++++E ++  +     K   Y +N L S   + +E ++   L L++       
Sbjct: 337 EQCKQFYISSRE-MEENVPLSASKEFNYKLNALIS-WSNVMESIQVETLVLQKWVGNDEF 394

Query: 503 AIKIR*PQLPTSGDENLKKMIERL 574
            + +R PQ    G EN    +ER+
Sbjct: 395 DLTMRTPQFNYDGVENTSSFVERI 418


>SPBC354.09c |||Tre1 family protein |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 794

 Score = 25.4 bits (53), Expect = 7.5
 Identities = 20/70 (28%), Positives = 32/70 (45%)
 Frame = -3

Query: 652 GWPLSSCWNFSWLPARTLRNLXLMFAQTLDHLLEVLVAACRQLWSSYLDGLVHFRGLLFQ 473
           GW  S+C +F    A T   +   F   L  +  V++ A    +  Y DG+  +R +   
Sbjct: 72  GWE-SACHSFEIRFASTFHRIPFQFLY-LAVIATVIILAS---YYGYFDGVPAWRSVHHY 126

Query: 472 GQPGLLNALK 443
           G+  LLN +K
Sbjct: 127 GEDVLLNYIK 136


>SPCC162.08c |nup211||nuclear pore complex associated
            protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1837

 Score = 25.4 bits (53), Expect = 7.5
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +2

Query: 344  IVATKEALDAKMETXEEKREAYINELRSRLKDHLEGVEK 460
            I+A +  L A+ E  +E+ E  +NE   R+K+  E  +K
Sbjct: 1592 ILAARSELVAEKEKTKEELENQLNEKSQRIKELEEQAQK 1630


>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 464

 Score = 25.4 bits (53), Expect = 7.5
 Identities = 16/62 (25%), Positives = 26/62 (41%)
 Frame = +2

Query: 323 SEQTNNFIVATKEALDAKMETXEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 502
           SEQT     A  + +  K    E   E     L++  KD+   ++K    LE++   + K
Sbjct: 391 SEQTQLVEEALTKVMKEKYREKENNLELLETNLKTHHKDYKHALKKRITALEEEKNRLIK 450

Query: 503 AI 508
            I
Sbjct: 451 EI 452


>SPCC569.08c |ade5|ade8|phosphoribosylglycinamide
           formyltransferase|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 207

 Score = 25.0 bits (52), Expect = 9.9
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 117 GGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLIAAE 239
           G + + VI A   G P+  +      T S+E ++EK+ AAE
Sbjct: 151 GAMVHWVIAAVDEGKPIIVQEVPILSTDSIEALEEKIHAAE 191


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,139,446
Number of Sequences: 5004
Number of extensions: 35285
Number of successful extensions: 140
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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