SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0003
         (854 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p...    29   0.64 
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa...    29   0.64 
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc...    29   0.64 
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce...    29   0.64 
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz...    29   0.64 
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy...    29   0.64 
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc...    29   0.64 
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc...    29   0.64 
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo...    29   0.64 
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy...    29   0.64 
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos...    29   0.64 
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces...    29   0.84 
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po...    28   1.5  
SPBC83.16c |||conserved fungal protein|Schizosaccharomyces pombe...    28   1.5  
SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces...    28   1.5  
SPCC1322.14c |vtc4||vacuolar transporter chaperone |Schizosaccha...    28   1.9  
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe...    27   3.4  
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom...    27   3.4  
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos...    27   3.4  
SPBC19G7.16 |iws1||transcription elongation factor complex subun...    27   4.5  
SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces...    26   5.9  
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos...    26   5.9  

>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1333

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
           E LDG+ TS  H   L      KH PE+ +F
Sbjct: 19  ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49


>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
           element|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1333

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
           E LDG+ TS  H   L      KH PE+ +F
Sbjct: 19  ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49


>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1333

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
           E LDG+ TS  H   L      KH PE+ +F
Sbjct: 19  ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49


>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1333

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
           E LDG+ TS  H   L      KH PE+ +F
Sbjct: 19  ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49


>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
           element|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1333

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
           E LDG+ TS  H   L      KH PE+ +F
Sbjct: 19  ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49


>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1333

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
           E LDG+ TS  H   L      KH PE+ +F
Sbjct: 19  ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49


>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1333

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
           E LDG+ TS  H   L      KH PE+ +F
Sbjct: 19  ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49


>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1333

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
           E LDG+ TS  H   L      KH PE+ +F
Sbjct: 19  ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49


>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
           element|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1333

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
           E LDG+ TS  H   L      KH PE+ +F
Sbjct: 19  ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49


>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1333

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
           E LDG+ TS  H   L      KH PE+ +F
Sbjct: 19  ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49


>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
           element|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1333

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
           E LDG+ TS  H   L      KH PE+ +F
Sbjct: 19  ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49


>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 995

 Score = 29.1 bits (62), Expect = 0.84
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -1

Query: 446 GFELXXIXFRNLFHCLDVRVNXX-LHNRLSTFVDGIEYLSEELDYXVES 303
           GF +    ++N+F  ++V+ N       + TF   I+Y+ E  D+ VES
Sbjct: 337 GFHICRWGYKNVFDLVEVKENFKNFEIPVDTFWSDIDYMYEYRDFTVES 385


>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 670

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +1

Query: 109 NALKNDLDTLAERIKEKSEKAGQEI-STISQKTAPYFKKIDEDFRREWSNFTRKSLMIRL 285
           +++K+DL  + +R+KE+ E    E+ S I+ +T   F+ +   + +   N   +    R+
Sbjct: 519 SSMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTARM 578


>SPBC83.16c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 563

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = -1

Query: 365 LSTFVDGIEY-LSEELDYXVESMR*FLQSLIISDFLVKLLHSLRKSSSIFLK 213
           LSTF  G+EY +S  L   + ++  F    I++   VK ++ LRK+ SIF K
Sbjct: 91  LSTFDPGVEYRVSIGLMLLLSALIGFCSESIVTS--VKSVYKLRKAHSIFSK 140


>SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 306

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +1

Query: 73  YGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDF 237
           YG+S  N   F + L+N  + L+  +K++  +   E S  ++  +   KK +E F
Sbjct: 214 YGISLPNLGIFTHILRNSRNDLSNYLKKRPYREVIESSLYNRNVSVACKKKNEAF 268


>SPCC1322.14c |vtc4||vacuolar transporter chaperone
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 721

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = +1

Query: 76  GLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDED 234
           G S+E+ + F+  L+ +LD +    K KS +  + I    ++T    +++D D
Sbjct: 37  GWSEEDESDFVELLEKELDKVYSFQKNKSAEVMERIRFCEEQTDEVVRRLDSD 89


>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 560

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 15/64 (23%), Positives = 29/64 (45%)
 Frame = +3

Query: 231 RLPQRMEQFYQEVTDDKTLKELSHAFNXIVQFFAKIFDTIYKGTEPIVEXXINTYVETVK 410
           +L    E   ++ + +K    +    N I++ F  ++D I     P V   ++ YVET+ 
Sbjct: 424 KLKAERELLSKQESMEKQSMHVDEESNQILEKFLDVYDIIKAKLPPNVAEKVDYYVETII 483

Query: 411 KIAE 422
           +  E
Sbjct: 484 ETPE 487


>SPBC14F5.08 |med7||mediator complex subunit
           Med7|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 376

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 148 IKEKSEKAGQEISTISQKTAPYFKKIDEDFR 240
           +KEK  ++ + +  + +KT P  KK +ED +
Sbjct: 152 MKEKDNESDKTMKDVEEKTEPSLKKEEEDIQ 182


>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
            |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1649

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 720  FEREVERFWVVSREVPDVDPVLVPAI 797
            FE + E FW+V      + PVL+  I
Sbjct: 1511 FENDTEEFWMVPARFGKISPVLIEQI 1536


>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
           Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 428

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = +1

Query: 70  DYGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDFRREW 249
           D  L   N    L  +   L    E ++E          TIS+K  P+ K+I ++   EW
Sbjct: 254 DRSLPALNIQRSLMDILTKLPIQTEHLRESKIGRIVLFYTISKKPEPFIKRIADNLVSEW 313

Query: 250 S 252
           S
Sbjct: 314 S 314


>SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 735

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 510 TSWAHFAALITDFFEKHKPELQEFTNVIHRYIQRSNP 620
           T  +HF  L+  + EK+   L+EFT+  + Y Q   P
Sbjct: 404 TEASHFEHLLRPYMEKYHMTLEEFTHA-YNYQQIHEP 439


>SPAC15A10.13 |ppk3||serine/threonine protein kinase
           Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 637

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +1

Query: 115 LKNDLDTLAERIKEKSEKAGQEISTISQKTAPYF---KKIDEDFRREWSN 255
           LKND   + E+   KS   G   ++  +   P F   ++IDE +   W++
Sbjct: 574 LKNDTTEIKEKKNSKSRVVGNTENSKDEFNNPLFETEEQIDESWMENWND 623


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,143,842
Number of Sequences: 5004
Number of extensions: 59645
Number of successful extensions: 205
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -