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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30034
         (942 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc...    40   7e-04
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo...    37   0.004
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc...    35   0.019
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub...    35   0.019
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo...    34   0.033
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac...    32   0.10 
SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr 1||...    31   0.24 
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc...    30   0.41 
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch...    30   0.41 
SPBC25H2.16c |||adaptin|Schizosaccharomyces pombe|chr 2|||Manual       30   0.54 
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe...    29   0.72 
SPBC1347.04 |tim54||TIM22 inner membrane protein import complex ...    29   0.72 
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ...    28   1.7  
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr...    28   2.2  
SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces po...    28   2.2  
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc...    27   2.9  
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc...    27   2.9  
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |...    27   3.8  
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom...    27   3.8  
SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Ma...    27   5.1  
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo...    27   5.1  
SPBC1A4.09 |||pseudouridine synthase|Schizosaccharomyces pombe|c...    26   6.7  
SPBC649.03 |rhp14||XP-A family homolog Rhp14|Schizosaccharomyces...    26   6.7  
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S...    26   6.7  
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    26   6.7  
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc...    26   8.8  
SPAC22F3.11c |snu23||U4/U6 x U5 tri-snRNP complex subunit Snu23|...    26   8.8  
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M...    26   8.8  
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy...    26   8.8  
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst...    26   8.8  

>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1085

 Score = 39.5 bits (88), Expect = 7e-04
 Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
 Frame = +1

Query: 457 EEAEKKRQA-MLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSI 633
           E+  ++RQA +L+ +++ +K      ++K  E       + +R+K K+QL+  K+     
Sbjct: 562 EKVAQQRQAKLLEEIEEENKRKQERELKKIREK------EKKRDK-KKQLKLAKEEERQR 614

Query: 634 RIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRH 813
           R      E  +   L  K QE  E   K E ++   E+ +K+Q+ + ++ +E+QKQ+ R 
Sbjct: 615 REAERLAEQAAQKALEAKRQE--EARKKREEQRLKREQEKKQQELERQKREEKQKQKERE 672

Query: 814 KALKKGLDPEALTGKHPPKIQVASKYERRV 903
           K LKK    EA   K   + ++  + E+R+
Sbjct: 673 KKLKK-QQQEADREKMAREQRLREEEEKRI 701



 Score = 27.5 bits (58), Expect = 2.9
 Identities = 27/136 (19%), Positives = 63/136 (46%)
 Frame = +1

Query: 430 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 609
           +IEE+ +R +E E K+    +  +D  K      + K+ E       +L     ++ LE 
Sbjct: 575 EIEEENKRKQERELKKIREKEKKRDKKK---QLKLAKEEERQRREAERLAEQAAQKALEA 631

Query: 610 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKE 789
           +++     + +   ++     +  +K QEL     + + ++ + E++ K+Q  +    K 
Sbjct: 632 KRQEEARKKREEQRLKR----EQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKM 687

Query: 790 RQKQQLRHKALKKGLD 837
            ++Q+LR +  K+ L+
Sbjct: 688 AREQRLREEEEKRILE 703


>SPAC17C9.03 |tif471||translation initiation factor eIF4G
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1403

 Score = 37.1 bits (82), Expect = 0.004
 Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
 Frame = +1

Query: 430  DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE-RNKTKEQLE 606
            + EEK +R  E + KR+A  +A ++A +       ++K++      A+ E   K K + E
Sbjct: 572  EAEEKAKREAEEKAKREAEEKAKREAEENAKR-EAEEKAKREAEEKAKREAEEKAKREAE 630

Query: 607  EEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKR--QDYDLKE 780
            E+ K     + K    E     K +++A+E  +   + E  K + EE+ KR  ++   +E
Sbjct: 631  EKAKREAEEKAKREAEE-----KAKREAEEKAKREAE-ENAKREAEEKAKREAEENAKRE 684

Query: 781  LKERQKQQLRHKALKKGLDPEALTGKHPPKIQVA---SKYERRVDTRSYT 921
             +E+ K++    A +K  +         P+I+ +   +  E  VDT   T
Sbjct: 685  AEEKVKRETEENAKRKAEEEGKREADKNPEIKSSAPLASSEANVDTSKQT 734



 Score = 32.3 bits (70), Expect = 0.10
 Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 7/137 (5%)
 Frame = +1

Query: 439 EKRQRLEEAEK-KRQAMLQAMKDASKTGPNFTIQK-KSENFGLSNAQLERNKTKEQLEEE 612
           E++ RLE  E  KR+A  QA ++A +       +K K E    +  + E N  K + EE+
Sbjct: 550 EEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEEN-AKREAEEK 608

Query: 613 KKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE---KYDLEERQKR--QDYDLK 777
            K     + K    E  +  +  +KA+   E   K E E   K + EE+ KR  ++   +
Sbjct: 609 AKREAEEKAK-REAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKR 667

Query: 778 ELKERQKQQLRHKALKK 828
           E +E+ K++    A ++
Sbjct: 668 EAEEKAKREAEENAKRE 684


>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 630

 Score = 34.7 bits (76), Expect = 0.019
 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
 Frame = +1

Query: 442 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE-QLEEEKK 618
           ++++LE   K +   LQ ++D  KT  +      S +     A LE  +  E ++EE K 
Sbjct: 29  QKEKLEGDLKTQIKKLQRLRDQIKTWAS------SNDIKDKKALLENRRLIEAKMEEFKA 82

Query: 619 ISLSIRIKPLTIEGLSV-DKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQ 795
           +   ++IK  + EGLS+  KL  K +E  + I  +     +LE + +  + + + LK   
Sbjct: 83  VEREMKIKAFSKEGLSIASKLDPKEKEKQDTIQWISNAVEELERQAELIEAEAESLKATF 142

Query: 796 KQ 801
           K+
Sbjct: 143 KR 144


>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
           subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 544

 Score = 34.7 bits (76), Expect = 0.019
 Identities = 23/90 (25%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
 Frame = +1

Query: 571 QLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEER 750
           +L+R K ++Q E+EKK+    +I    ++ L  +KL ++   L E   + E     L E+
Sbjct: 97  RLKREKERQQREQEKKLREQEKIAAKKMKEL--EKLEKERIRLQEQQRRKEERDQKLREK 154

Query: 751 QKRQDYDLKELKERQKQQLR-HKALKKGLD 837
           ++ Q    +++  +++QQL+ +    KG++
Sbjct: 155 EEAQRLRQEQILNKERQQLKLNNFFTKGVE 184


>SPBC947.07 |||ribosome biogenesis protein
           Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 233

 Score = 33.9 bits (74), Expect = 0.033
 Identities = 21/64 (32%), Positives = 34/64 (53%)
 Frame = +1

Query: 436 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 615
           EEKR+++EE++K  + +LQA  +  K   N  + KKS        +   +  KE+ + EK
Sbjct: 138 EEKRRKIEESDKWHRVLLQA--EGKKLKDNEQLLKKSIRRKEKEKKKSSDAWKERKDNEK 195

Query: 616 KISL 627
           K  L
Sbjct: 196 KAML 199



 Score = 25.8 bits (54), Expect = 8.8
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +3

Query: 681 TEGPGTLGVHRQTRDREIRSRREAKE---TGLRLKRAQRKTKAATEAQS-SQEGSRPRSA 848
           TEG   L      + +  RS+R+A E     L L+R + K KA  EA+  +++ S+ +  
Sbjct: 4   TEGKNDLRAKLAEKIQTFRSQRKATEKVDRALLLQRRKEKAKARAEAKKLAKKESKAKQE 63

Query: 849 HRQAPAQNSSS 881
            + A     +S
Sbjct: 64  SKVAAYDTGNS 74


>SPBC365.07c |||TATA element modulatory factor homolog
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 547

 Score = 32.3 bits (70), Expect = 0.10
 Identities = 29/136 (21%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
 Frame = +1

Query: 433 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 612
           + E   +L+  ++K+      + D+ +      +QK      +S  + E+   + ++EE 
Sbjct: 73  LSEAETKLKRLDEKQATPELQVSDSKEMEEQLELQKSQFEKRISILEKEKEDLQRKMEEL 132

Query: 613 KKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKEL-KE 789
              S+ +      +E LS     Q++Q + E   K + E  DL+E  ++ ++  K   +E
Sbjct: 133 TVESMEVVRLTRQVETLSTQYSIQRSQWVRE-DEKKKKEIQDLKELYEKSEHGAKNWERE 191

Query: 790 RQKQQLRHKALKKGLD 837
           R+  Q +   + K LD
Sbjct: 192 RETFQNQVSQMSKQLD 207


>SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 197

 Score = 31.1 bits (67), Expect = 0.24
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +3

Query: 693 GTLGVHRQTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQE 827
           GTLG  +Q  +RE +S R+ K   L  K A+R+ +   E +  ++
Sbjct: 82  GTLGKFQQESEREQKSARKVKRAELEEKLAKRREQELQELEKQEK 126


>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1190

 Score = 30.3 bits (65), Expect = 0.41
 Identities = 18/52 (34%), Positives = 33/52 (63%)
 Frame = +1

Query: 682  QKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLD 837
            ++AQE++  ++ L  E  D+E+ Q  Q  +   L+E ++++LRH  L+K LD
Sbjct: 906  KRAQEMYANVL-LGVE--DMEDDQFSQRCERMALREAERRKLRHGKLQKHLD 954


>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 750

 Score = 30.3 bits (65), Expect = 0.41
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
 Frame = +1

Query: 430 DIEEKRQRLEEAEKKRQAMLQAMKD----ASKTGPNFTIQKKSENFGLSNAQLERNKTKE 597
           ++EEK   LE A+   Q ++ ++KD     +K       +  ++  G+S+A L + K K 
Sbjct: 162 ELEEKINSLESAQSIEQEVISSLKDDKTVETKNDVPEVSRPSTDTIGVSSA-LSKKKKKR 220

Query: 598 QLEEEKKISLSIRIKPLT 651
             + +KK S    I+  T
Sbjct: 221 NRKNQKKKSTKQNIEATT 238


>SPBC25H2.16c |||adaptin|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 533

 Score = 29.9 bits (64), Expect = 0.54
 Identities = 19/72 (26%), Positives = 42/72 (58%)
 Frame = +1

Query: 586 KTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQD 765
           KT E+LE+E + ++S +++ L   G   D    +A +L + +       YD E++QK ++
Sbjct: 168 KTAEELEKEDREAMSAKLQELIRRGTPADLA--EANKLMKVMAG-----YDTEQKQKYKE 220

Query: 766 YDLKELKERQKQ 801
           + L +L++ +++
Sbjct: 221 HVLVDLEKVKRK 232


>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 721

 Score = 29.5 bits (63), Expect = 0.72
 Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 1/156 (0%)
 Frame = +1

Query: 433 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQK-KSENFGLSNAQLERNKTKEQLEE 609
           I E+++      + + A+ +  K A +     T+ + + ++  LS    +R   +   E+
Sbjct: 280 IAERKRESGRRLQAQAAIKRKEKAAERDRELATLTELQQQSLVLSRRAFQRALEEAGFED 339

Query: 610 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKE 789
           E +++  ++     I     D+ RQ+  E       L+  + D+E+     +    EL E
Sbjct: 340 ESQLNAQVKNVQAKIRRAQRDQQRQEESE-----GSLDVTEIDVEQAFPLLNVPDAELDE 394

Query: 790 RQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYER 897
              +Q RH+ L K      +  K    I+ A++ ER
Sbjct: 395 AGLRQKRHQRLMKANYDARVRAKAEKAIEEAAEAER 430


>SPBC1347.04 |tim54||TIM22 inner membrane protein import complex
           subunit Tim54|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 347

 Score = 29.5 bits (63), Expect = 0.72
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 9/61 (14%)
 Frame = +1

Query: 715 KLETEKYDL---EERQKRQDYDLKELKERQKQQLRHKALKKG------LDPEALTGKHPP 867
           KLETEK +    EE+++++  D K+ KE        K + K       ++   LTG+ PP
Sbjct: 173 KLETEKLEANNKEEKEEKEGKDDKDDKEDSNDTKNDKKISKNEVDSSLIEASPLTGQVPP 232

Query: 868 K 870
           K
Sbjct: 233 K 233


>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 598

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +1

Query: 454 LEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 615
           +EE E+ R+  + A  D +  G    +  +S+  G  +  +++ KTK+QLEEE+
Sbjct: 197 VEEQERLRKETIAAFHDVN--GNKDAVSNESDEDG--DFLVKKEKTKKQLEEEE 246


>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 633

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +1

Query: 547 ENFGLSNAQLERNKT-KEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLE 723
           EN  L +  L+R K   E+L + +  +  +  + +T E      L QKA E  E I KLE
Sbjct: 366 ENTSLESQLLKREKQLSEELAKLRSTNAQLTDR-ITQESKKASFLEQKASEQEEVIRKLE 424

Query: 724 TEKYDLE 744
            +  D++
Sbjct: 425 KDLADVD 431


>SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 218

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
 Frame = +1

Query: 433 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 612
           + EK+   +   K   A ++A + ASK+G   T    S+N  L   + +R + K   E  
Sbjct: 116 LHEKKVIDDNQYKDAMATVEAHEQASKSGDTSTSGAISKNDILKRIEEDRERHKRMRENI 175

Query: 613 KKIS---LSIRIKPLTIEGLS---VDKLRQKAQELWECI 711
             IS   L   I   T +G++   ++ L+ + ++  EC+
Sbjct: 176 WAISEPELEAEIAWNTTQGITESDLESLKDEYEKFNECL 214


>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
           orphan|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 776

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +1

Query: 442 KRQRLEEAEKKRQAMLQAMKDAS---KTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 612
           K   +   +++R A +QA+ D S   +T  +   + +SEN GL N  ++     +QLE+E
Sbjct: 232 KDHEILRLKEERTAAMQAIDDISGTIETIKSDCYKVESENKGLINEVMDMRNFVQQLEQE 291


>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 830

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = +1

Query: 718 LETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPP 867
           LE ++YD+EE     D DL+EL    ++ +  +  ++ ++ +A  G+  P
Sbjct: 84  LELDRYDIEELD--DDNDLEELDIGARRAVDARLRRRDIELDAAAGRTKP 131


>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 649

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = +1

Query: 601 LEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKE 780
           +EE  +I +S+ +KPL I      K    A  +    V  E + Y+  ++Q++++ + K+
Sbjct: 13  IEETNRIRISLGLKPLDISEEKPQKELSDA-SVKSSYVDQEQQAYENWKKQEQEEINRKK 71

Query: 781 LKERQK--QQLRHK 816
            +E +   ++LR K
Sbjct: 72  EEELKSKFEKLRQK 85


>SPAC1834.07 |klp3|krp1|kinesin-like protein
           Klp3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 554

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +1

Query: 520 PNFTIQKKSENFGLSNAQLERNKTKEQLEE-EKKISLSIRIKPLTIEGL 663
           P FTI++K +NF ++N   ERN   ++L   +  ++  + ++   I+ L
Sbjct: 490 PGFTIEQKDKNFSINN---ERNNFLQKLSTLDSSLAALVNVQRKLIKAL 535


>SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 111

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
 Frame = +1

Query: 745 ERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPK-------IQVASKYERRV 903
           E++  Q   L E+KER+K+  R K  ++    E +  +   K       +  A  +++ +
Sbjct: 36  EKRMEQKRKLDEIKEREKELKREKEEQRAAHAEKIRTRRQAKADRERMELLQAKLHQKVI 95

Query: 904 DTRSYTTKRN 933
           D R    KRN
Sbjct: 96  DRRRRREKRN 105


>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1336

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 282 PLFAPFVDVFLQLFIQVRPLLVLTLDEFWISLTLLFRSG 166
           P+FA  +   L LF+Q+ P + +    FW S+ L+  +G
Sbjct: 796 PIFAYVISKCLNLFMQIDPSIGVA---FWSSMVLVVAAG 831


>SPBC1A4.09 |||pseudouridine synthase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 680

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 672 QTPTEGPGTLGVHRQTRDREIRSRREAK 755
           ++ T+G GT  V + TR  + RSRR+ +
Sbjct: 203 ESSTKGNGTFTVSKTTRKNQPRSRRDPR 230


>SPBC649.03 |rhp14||XP-A family homolog Rhp14|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 289

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
 Frame = +1

Query: 592 KEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWEC--------IVKLETEK--YDL 741
           +EQ  E +K+     I+ + ++G  V+K ++   E  E           K+E  K  Y L
Sbjct: 15  EEQRNEIEKLKNLTGIEEVHVDGAKVNKRKRTFDEQSEITKDYIEYDFSKIEDTKGGYLL 74

Query: 742 EE------RQKRQDYDLKELKERQKQQLRHKALKKGLDPE 843
           EE      R+K  + +L+E +ERQK +LR   L   LDPE
Sbjct: 75  EEKKVEDLREKPAERELREQEERQK-KLRLAPL--NLDPE 111


>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 316

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
 Frame = +1

Query: 532 IQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRI-KPLTIEGLSVDKLRQKAQELWEC 708
           ++K+       NA++E+   +  +EEE++    I I    + E   + KL ++ +E+ E 
Sbjct: 25  LEKEHLRMTQQNAEIEKEDEEYNIEEEEEAERDIEISSESSDEEAELKKLEEEGEEV-EK 83

Query: 709 IVKLETEKYDLEERQKRQDYDLKELKERQKQ-------QLRHKALKK-GLDPEA-LTGKH 861
           I++ + E+    + QK +  +L+   +  K+       ++  K  KK  +DP A  T   
Sbjct: 84  ILR-DEERIKKRKIQKNRAANLQRTLQPPKRPTPSAASEVPKKKYKKIKVDPSARRTSSR 142

Query: 862 PPKIQVASKYERRVD----TRSYTTKRNCSR 942
              + +A   E R+      R YT   + +R
Sbjct: 143 MHTVLMAQSTETRLQEAKPRRKYTVSASANR 173


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = -3

Query: 706 TPRVPGPSVGVCRRRDPRWSAA*CGWTGRSSSPLPAAPWSC 584
           TP VP  S        P  S +    TG SSSPLP+   SC
Sbjct: 302 TPTVPPTSTSSTSTPPPPASTS---STGTSSSPLPSTSTSC 339


>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
           Sap155|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1188

 Score = 25.8 bits (54), Expect = 8.8
 Identities = 16/82 (19%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
 Frame = +1

Query: 574 LERNKTKEQLEEEK----KISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYD- 738
           ++  ++K+Q+++ +    K     ++ P  ++    D  +   +   E + ++E EK + 
Sbjct: 113 MQERQSKKQIQDRESDYQKQRYDRQLTPTRVDAFQPDGTQSNGRSYAEVMRQVELEKEER 172

Query: 739 ---LEERQKRQDYDLKELKERQ 795
              +E  Q+R++  LKE++E +
Sbjct: 173 RVHMELNQRRREGTLKEVEEEE 194


>SPAC22F3.11c |snu23||U4/U6 x U5 tri-snRNP complex subunit
           Snu23|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 151

 Score = 25.8 bits (54), Expect = 8.8
 Identities = 15/69 (21%), Positives = 36/69 (52%)
 Frame = +1

Query: 433 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 612
           I EKR  LEE +++ +   + + +  K    ++++++ E +   + +LE  K + + ++ 
Sbjct: 65  IIEKRATLEEVKERMEYWRRQLLEPEKGSEEYSLKERVERY---HQELEAKKLRRKQKKV 121

Query: 613 KKISLSIRI 639
            K   S R+
Sbjct: 122 NKEKNSPRL 130


>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 468

 Score = 25.8 bits (54), Expect = 8.8
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 733 YDLEERQKRQDYDLKELKERQKQQLRHKALKK 828
           Y+ E+R KRQ+    E + R+K++ R  A +K
Sbjct: 242 YEREQRAKRQEQFRLERENREKEKRRIAAQRK 273


>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 274

 Score = 25.8 bits (54), Expect = 8.8
 Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 436 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTK--EQLEE 609
           EEK +++EE E   +   + ++D  K+    +++K S       A+ +R+ +   E LE+
Sbjct: 132 EEKDRKIEEGELTSEEEKEPIQDLRKSHKRKSVEKSSVPNKKHKAERKRSPSPKIEILED 191

Query: 610 EKKI 621
           +++I
Sbjct: 192 DEEI 195


>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
           Pst2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1075

 Score = 25.8 bits (54), Expect = 8.8
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 703 ECIVKLETEKYDLEERQKRQDYDLKELKERQKQ 801
           E + KLE E+Y+ +   +   + +K LK+ Q +
Sbjct: 391 EAMTKLEEERYEFDRHIEATSWTIKSLKKIQNR 423


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.314    0.130    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,787,794
Number of Sequences: 5004
Number of extensions: 42708
Number of successful extensions: 231
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 479324640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)

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