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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a13
         (255 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S...    25   1.2  
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces...    24   2.8  
SPBC12C2.07c |||spermidine synthase |Schizosaccharomyces pombe|c...    24   2.8  
SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces...    24   3.7  
SPAC222.04c |ies6||chromatin remodeling complex subunit Ies6 |Sc...    23   4.9  
SPAC57A10.08c |||esterase/lipase |Schizosaccharomyces pombe|chr ...    23   4.9  
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr...    23   6.4  
SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|ch...    23   8.5  
SPAP8A3.07c |||phospho-2-dehydro-3-deoxyheptonate aldolase |Schi...    23   8.5  
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo...    23   8.5  
SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc...    23   8.5  

>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1842

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 126  KEILRSRVIDHDYEP 170
            KE+L+  VIDHD EP
Sbjct: 1076 KELLQEVVIDHDLEP 1090


>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 513

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -1

Query: 111 TCAGCEGGRDPKSQPRTN 58
           TCA C    DP SQ R N
Sbjct: 432 TCAICRAPVDPNSQQRNN 449


>SPBC12C2.07c |||spermidine synthase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 298

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 18  DNFEWLEGYTERFGLYEVDFSDPARP 95
           D F++L+ Y   F +   D SDP  P
Sbjct: 150 DGFKFLQDYQNTFDVIITDSSDPDGP 175


>SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 658

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 18  DNFEWLEGYTERFGLYEVDFSDPARPRTPRKSAFVYKEILRSRVIDHDYE 167
           +NF   +G+ + F  +   F D     +   SA + KE L SR+ D+D++
Sbjct: 61  ENFMKRKGFDD-FASFIRPFGDRIFQSSTNNSA-ISKETLDSRIFDNDHD 108


>SPAC222.04c |ies6||chromatin remodeling complex subunit Ies6
          |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 117

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -1

Query: 78 KSQPRTNRNVRCIL 37
          K+QPR NRN+R I+
Sbjct: 25 KAQPRRNRNLRQII 38


>SPAC57A10.08c |||esterase/lipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 364

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 135 LRSRVIDHDYEPNTTVMTIDEGH 203
           L+ +V   DY  N T   ID GH
Sbjct: 314 LKDKVFFQDYPGNYTFKEIDTGH 336


>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
           heterochromatin assembly Hrr1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1015

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 42  YTERFGLYEVDFSDPARPRTPRKSAFVYKEILRSRVIDHDYE 167
           +TE+    E   +  +      K+    K I R R ID+DYE
Sbjct: 59  FTEQIETSETSKTQDSEGNKVDKNLKENKSIRRKRSIDNDYE 100


>SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 679

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 73  STSYKPKRSVYPSNHSKLSIRLQA 2
           S S  P RS  PS  S+++  LQA
Sbjct: 474 SMSQSPSRSDLPSKISRVNAELQA 497


>SPAP8A3.07c |||phospho-2-dehydro-3-deoxyheptonate aldolase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 372

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 50  TFRFVRG*LFGSRPPSHPAQVRLRLQGDLEKQGHRPRL 163
           TF  +RG   G + P++ A+    ++ DLEK    PR+
Sbjct: 241 TFIILRG---GKKGPNYDAEHVAAVRKDLEKANLPPRI 275


>SPBC13G1.08c |ash2||Ash2-trithorax family
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 652

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +3

Query: 90  RPRTPRKSAFVYKEILRSRVIDHDY--EPNTTVMTID 194
           RP + R +  + +++L   + + DY  +PNT+ +TID
Sbjct: 596 RPVSERYNEQIAEDVLCDILDEIDYAEDPNTSSVTID 632


>SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase
           Cdc25|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 596

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +2

Query: 95  SHPAQVRLRLQGDLEKQGHRPRLRAQHYRHDHRRGTLRQY 214
           S P   R+ L    E   HR    A H+R+  RR    +Y
Sbjct: 467 SKPLTHRVALVFHCEHSAHRAPHLALHFRNTDRRMNSHRY 506


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 869,552
Number of Sequences: 5004
Number of extensions: 12921
Number of successful extensions: 47
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 49493712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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