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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0028
         (447 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa...    31   0.11 
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po...    30   0.14 
SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    29   0.25 
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi...    28   0.57 
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom...    28   0.75 
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|...    27   0.99 
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein...    26   3.0  
SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein glycotr...    26   3.0  
SPCC18B5.06 |erf1|sup45|translation release factor eRF1|Schizosa...    25   4.0  
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M...    25   7.0  
SPAC5D6.05 |sep11|pmc6, med18|mediator complex subunit Pmc6 |Sch...    24   9.3  
SPAC27E2.03c |||GTP binding protein |Schizosaccharomyces pombe|c...    24   9.3  
SPBC8D2.01 |gsk31||serine/threonine protein kinase Gsk31|Schizos...    24   9.3  
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom...    24   9.3  

>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1029

 Score = 30.7 bits (66), Expect = 0.11
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = -1

Query: 279  VSNQNVNAYYARTRIRKFLNVRLSKESGRSCNKNGFTIVKFPHGLIMFIQSSI 121
            V+N+N    Y       +LN RLS++       NGFT +  PH L MF +S I
Sbjct: 857  VTNEN-RLQYIHLVSNYYLNARLSRQC--RAFTNGFTQIIDPHWLAMFHESEI 906


>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 981

 Score = 30.3 bits (65), Expect = 0.14
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +1

Query: 166 DGKSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRDKKGSNTEERM 309
           +G+   +TGATG+ G+ ++E   Y     +S+  L+R+      +ER+
Sbjct: 643 NGQYFLLTGATGYFGRRFLE---YLVKLNISVVCLVRESSDEAAKERL 687


>SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 600

 Score = 29.5 bits (63), Expect = 0.25
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 271 IRDKKGSNTEERMRKYLDQPIFSRIKYEHPEYFKKII 381
           +  K  SN E+R+ KY+      R   +HP++  K++
Sbjct: 393 VHQKLNSNLEKRVEKYIKHSCSQRNVADHPDFALKVV 429


>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1419

 Score = 28.3 bits (60), Expect = 0.57
 Identities = 23/91 (25%), Positives = 43/91 (47%)
 Frame = +1

Query: 172  KSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRDKKGSNTEERMRKYLDQPIFSRIKY 351
            K+VF+TGA G+LG   +  L      +  +  L+R    S+ E  +++  D      +  
Sbjct: 1005 KTVFLTGANGYLGVFILRDLMTRSSNL-KVIALVR---ASSEEHGLKRLKDSCTAYGVWD 1060

Query: 352  EHPEYFKKIIPISGDITAPKLGLCDEERNIL 444
            E   + +KI  ++GD+     G+ + + N L
Sbjct: 1061 E--SWAQKISVVNGDLALENWGIEERKWNKL 1089


>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 259

 Score = 27.9 bits (59), Expect = 0.75
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = +1

Query: 166 DGKSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRDKKGSNTEE 303
           DGK++ ITGA+  +GK+     A+    +  + +++  ++ S  EE
Sbjct: 5   DGKTILITGASSGIGKS----TAFEIAKVAKVKLILAARRFSTVEE 46


>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 336

 Score = 27.5 bits (58), Expect = 0.99
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 169 GKSVFITGATGFLGKAYVEKL 231
           GK V +TG TGF+G    E+L
Sbjct: 3   GKLVLVTGVTGFIGAHVAEQL 23


>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 295

 Score = 25.8 bits (54), Expect = 3.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 178 VFITGATGFLGKAYVEKL 231
           +F+TGA GF+G   V +L
Sbjct: 3   IFVTGAAGFIGSEIVRQL 20


>SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein
           glycotransferase subunit |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 437

 Score = 25.8 bits (54), Expect = 3.0
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 443 NIFLSSSHNPSLGAVISPEMGMIFLKYSGCSYFI 342
           N+ L SS + SLG V SP+  + F++ SG + F+
Sbjct: 71  NLILLSSQSKSLGPVFSPKSLLEFVQ-SGGNLFV 103


>SPCC18B5.06 |erf1|sup45|translation release factor
           eRF1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 390

 Score = 25.4 bits (53), Expect = 4.0
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
 Frame = +1

Query: 22  NTCLI*TIISLLRKNCDQLQIIFKFRVISKMSHNGTLDEHYQTV-----REF-YDGKSVF 183
           N CLI   +++LR+  D  Q+I + R     ++   LD+ Y +V      EF +D   V 
Sbjct: 148 NICLITDYMTILRQRID--QVIPRKRRGDSSAYQKGLDKFYDSVFQSINSEFDFDKLKVV 205

Query: 184 ITGATGFLGK 213
           I  + GF+ +
Sbjct: 206 ILASPGFVAR 215


>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 341

 Score = 24.6 bits (51), Expect = 7.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 184 ITGATGFLGKAYVEKLAYSCPGIVSI 261
           +TGAT  +GK Y  +LA S   +V I
Sbjct: 62  VTGATDGIGKEYATQLAMSGFNVVLI 87


>SPAC5D6.05 |sep11|pmc6, med18|mediator complex subunit Pmc6
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 207

 Score = 24.2 bits (50), Expect = 9.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 178 RIYHRKIPSRSDNVHPKFH 122
           RIY   IPS+  ++ P FH
Sbjct: 139 RIYQTLIPSQQRSIKPPFH 157


>SPAC27E2.03c |||GTP binding protein |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 392

 Score = 24.2 bits (50), Expect = 9.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 112 MSHNGTLDEHYQTVREFYDGKSVFITG 192
           +SH   +D  YQ VR F D + + + G
Sbjct: 110 LSHVRAVDAIYQVVRAFDDAEIIHVEG 136


>SPBC8D2.01 |gsk31||serine/threonine protein kinase
           Gsk31|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 381

 Score = 24.2 bits (50), Expect = 9.3
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +1

Query: 196 TGFLGKAYVEKLAYSCPGIVSIYILIRDKKGSNTEERMRKYLDQP-IFSRIKYEH 357
           +G  G     KL    PG +++  +++DK+  N E ++ + +  P I   I + H
Sbjct: 33  SGSFGVVIQAKLV-GTPGFIAVKRVLQDKRYKNRELQIMRAISHPNIIKLIAFFH 86


>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 397

 Score = 24.2 bits (50), Expect = 9.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 166 DGKSVFITGATGFLGKAYVEKLA 234
           +G  V +TG +  +G+  VEKLA
Sbjct: 74  NGMVVMVTGGSSGIGQVVVEKLA 96


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,948,336
Number of Sequences: 5004
Number of extensions: 40597
Number of successful extensions: 109
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 164204010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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