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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0006
         (707 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||...   423   e-119
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb...   237   1e-63
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s...   228   7e-61
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce...   163   2e-41
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe...   114   1e-26
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy...   113   3e-26
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc...   103   3e-23
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa...    68   1e-12
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po...    56   5e-09
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb...    38   0.002
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce...    32   0.092
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    32   0.092
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr...    31   0.16 
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    30   0.37 
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo...    28   1.1  
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos...    28   1.1  
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur...    27   2.6  
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual         27   2.6  
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces...    27   2.6  
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    27   3.5  
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p...    26   4.6  
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S...    26   6.1  
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc...    26   6.1  
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa...    25   8.0  
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo...    25   8.0  

>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 375

 Score =  423 bits (1041), Expect = e-119
 Identities = 194/210 (92%), Positives = 204/210 (97%)
 Frame = +3

Query: 78  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
           +EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2   EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61

Query: 258 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 437
           RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMTQ
Sbjct: 62  RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121

Query: 438 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 617
           I+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 181

Query: 618 GRDLTDYLMKILTERGYSFTTTAEREIVRD 707
           GRDLTDYLMKIL ERGY+F+TTAEREIVRD
Sbjct: 182 GRDLTDYLMKILMERGYTFSTTAEREIVRD 211


>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score =  237 bits (580), Expect = 1e-63
 Identities = 106/205 (51%), Positives = 151/205 (73%), Gaps = 1/205 (0%)
 Frame = +3

Query: 96  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 275
           + +DNGSG  KAGFAGDD P+ +FP+ VGR +H+ VM    QKD +VG EAQ+ RG+L +
Sbjct: 12  ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71

Query: 276 KYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 452
           + PIE GI+ NW DME+IW + + ++ L   PEEHP+LLTE PL    N+EK+ +  +ET
Sbjct: 72  QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131

Query: 453 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 632
            N PA+  ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI + ++ GRD+T
Sbjct: 132 LNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVT 191

Query: 633 DYLMKILTERGYSFTTTAEREIVRD 707
           DYL   L + G+   ++AE+EIVR+
Sbjct: 192 DYLQLQLRKSGHELVSSAEKEIVRE 216


>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
           subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 390

 Score =  228 bits (557), Expect = 7e-61
 Identities = 106/210 (50%), Positives = 150/210 (71%), Gaps = 2/210 (0%)
 Frame = +3

Query: 84  EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 257
           E A +V+DNG+G  K G+A D+ PR  FPSIVGRP  R +     +  KD  VGDEA++ 
Sbjct: 2   ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61

Query: 258 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 437
           R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P    +LLTE P+NP ANREKM +
Sbjct: 62  RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121

Query: 438 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 617
            MFE +    +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE   L H + RLD+A
Sbjct: 122 TMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVA 181

Query: 618 GRDLTDYLMKILTERGYSFTTTAEREIVRD 707
           GRD T YL+ +L  +GY+F  TA+ E VR+
Sbjct: 182 GRDATRYLISLLLRKGYAFNRTADFETVRE 211


>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score =  163 bits (397), Expect = 2e-41
 Identities = 94/233 (40%), Positives = 132/233 (56%), Gaps = 34/233 (14%)
 Frame = +3

Query: 96  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 224
           +++DNG+G  K G+AG+DAP  VFP+++   R  G   G         M  K        
Sbjct: 8   IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66

Query: 225 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 383
                 D ++G++A  K     +L YPI HG + NWD ME+ W  + +  LR  PE+H  
Sbjct: 67  RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126

Query: 384 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDS 539
           LLTE PLNP  NRE   +IMFE+FN   +Y+A+QAVL+L AS  +        TG V+DS
Sbjct: 127 LLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDS 186

Query: 540 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY--SFTTTAER 692
           GDGV+H +P+ EGY +  +I  + LAGRD+T ++  +L +R    S   TAER
Sbjct: 187 GDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER 239


>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 721

 Score =  114 bits (274), Expect = 1e-26
 Identities = 61/196 (31%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
 Frame = +3

Query: 96  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 275
           LV+DNGS   +AG+ G+  P+ VF ++V R R +     + +  + VG++   + G  ++
Sbjct: 27  LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSI 82

Query: 276 -KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 452
            + P E  +++NWD ME++  +TF  +L +   EHP+ +TE   NP   R  MT+++FE 
Sbjct: 83  ARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFEL 141

Query: 453 FNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 626
           +N P++   I  + S Y + +  ++GIVL+ G+  SH +P+  G  +     R+   G  
Sbjct: 142 YNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQ 201

Query: 627 LTDYLMKILTERGYSF 674
            + YL+K+   +  SF
Sbjct: 202 SSSYLLKLFQIKYPSF 217


>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 433

 Score =  113 bits (271), Expect = 3e-26
 Identities = 64/196 (32%), Positives = 101/196 (51%)
 Frame = +3

Query: 81  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 260
           +EV+A+V+D GS   + GF+G+D P+ V PS  G       + G    + Y+    +S  
Sbjct: 9   DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61

Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 440
           G + +K  I +G V NWD    +W +    +L+  P EHP+L+TE   NP  NR K  + 
Sbjct: 62  G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLET 120

Query: 441 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 620
           MFE+   PA Y+A Q   + +ASG+ T  ++D G   S    IY+G+ L         +G
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSG 180

Query: 621 RDLTDYLMKILTERGY 668
             + D L + L ++ +
Sbjct: 181 NAINDILAQTLRDKNF 196


>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
           Arp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 430

 Score =  103 bits (246), Expect = 3e-23
 Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 2/200 (1%)
 Frame = +3

Query: 81  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 260
           EE+ +LV+D GS   + G+AG+++P  + PS      + GV   +  ++ YV DE Q   
Sbjct: 8   EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61

Query: 261 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
            I  + +K    +GI+ +W+     W      +L+V P E+ +++TE   NP++ R+++ 
Sbjct: 62  PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIM 121

Query: 435 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
           +  FE  + PA Y+  QAV   +A+ ++T +++D G   +   P+ +G  +   I +  L
Sbjct: 122 EAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSL 181

Query: 615 AGRDLTDYLMKILTERGYSF 674
           AG  L   + ++       F
Sbjct: 182 AGDFLNANIEQLFNTMNIEF 201


>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
           Arp9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 523

 Score = 68.1 bits (159), Expect = 1e-12
 Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
 Frame = +3

Query: 282 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 449
           PI+ G V +W+ ++  W H  Y+ L   P +    +PV L         +RE  TQ  FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171

Query: 450 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 629
               P   +A + ++ LYA G   G+V+D G   +   PI +G  +  A  +L L GR +
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYM 231

Query: 630 TDYLMKILTE 659
           T +L  +L E
Sbjct: 232 TQHLQNLLRE 241


>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 401

 Score = 56.0 bits (129), Expect = 5e-09
 Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
 Frame = +3

Query: 96  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 275
           +V+DNG+   KAGFAG        P+ + R +        G +  ++G+E  +     TL
Sbjct: 8   IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57

Query: 276 KYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIM 443
           ++   H  G + +W     +W     N   + P   ++ +LLT+      +      Q++
Sbjct: 58  QFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLV 117

Query: 444 FETFNTPAMYVAIQAVLSLYASGRTT--------------GIVLDSGDGVSHTVPIYEGY 581
           FE F   A      A L  +  G  T               +V+DSG   +H +P+ +  
Sbjct: 118 FEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFS 177

Query: 582 ALPHAILRLDLAGRDLTDYLMKILTERGYS 671
               A+ R+D+ G+ LT+YL ++++ R Y+
Sbjct: 178 VQEQAVKRVDVGGKLLTNYLKEVISYRKYN 207


>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 620

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 28/146 (19%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
 Frame = +3

Query: 273 LKYPIEHGIVTNWD---------DMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKA 416
           L YPI+ G+    D         D+ +I+ ++  + L++   +   + V+     L  + 
Sbjct: 198 LFYPIKSGVFNESDYASSQQLLADIYEIFKYSITSLLQIPVSQLSQYSVIFIVPDLYDRV 257

Query: 417 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 596
             EK+  I+F   +     +  +++ + + +G +   V+D G   +    + EG  +P++
Sbjct: 258 YVEKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNS 317

Query: 597 ILRLDLAGRDLTDYLMKILTERGYSF 674
            ++++  G D+T   MK+L    + +
Sbjct: 318 RIKINYGGDDITLLFMKLLMRSHFPY 343


>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1666

 Score = 31.9 bits (69), Expect = 0.092
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
 Frame = +3

Query: 342  FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 485
            +Y  L    E+HP+LLT+  A L P+ +  ++ +I  ++ NTP +    VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 31.9 bits (69), Expect = 0.092
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +1

Query: 466  PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
            P T+P  P    T PV P  S   P+   P P PS+     P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080



 Score = 27.1 bits (57), Expect = 2.6
 Identities = 16/46 (34%), Positives = 19/46 (41%)
 Frame = +1

Query: 463  PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
            PP  +P  P      P VPP     P+T  P P PS      P P+
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPP-----PSTAPPVPTPSAGLPPVPVPT 1233



 Score = 26.6 bits (56), Expect = 3.5
 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
 Frame = +1

Query: 463  PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
            PP   PS       +P   VPPV    P+   P P PS      P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137



 Score = 25.8 bits (54), Expect = 6.1
 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
 Frame = +1

Query: 463  PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
            PP  +PS       +P   VPPV    P+   P P PS      P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214


>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1517

 Score = 31.1 bits (67), Expect = 0.16
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +3

Query: 141 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 284
           G+  PRA F  ++  P H G+++ M  KD   G+E  S +G  + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 29.9 bits (64), Expect = 0.37
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -2

Query: 238 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 77
           PT  S  P+ PT+ P     P    N     S P         PL+TTN  TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455



 Score = 29.5 bits (63), Expect = 0.49
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 442 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 600
           C+  ++ PP T  S   S    P VPP S   T   + PT   ST    SP P+
Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224



 Score = 28.3 bits (60), Expect = 1.1
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 442 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 600
           C+  ++ PP T  S   S    P VPP S   T   + PT   ST    +P P+
Sbjct: 115 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167



 Score = 25.8 bits (54), Expect = 6.1
 Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +1

Query: 454 STRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 600
           ST  P T  S   S    P VPP S   T   + PT   ST    SP P+
Sbjct: 232 STSIP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280


>SPCC18.03 |||shuttle craft like transcriptional
           regulator|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1077

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 487 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 591
           PC+     + PPV+C TP    P  C   +  H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655


>SPAC20G8.05c |cdc15||cell division control protein
           Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 927

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 249 VPHLLHKSPSVPYRPSRPDGGAFPRSRGTR 160
           +  L+ K+PS PY  SRP   A   S  TR
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTR 335


>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
           deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 398

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 487 PCSRCTRPVVPPVSCWTPATVSPTPCPST 573
           P SR T+P+    S  +P  VSP   PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290


>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 127

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 23/60 (38%), Positives = 28/60 (46%)
 Frame = -1

Query: 278 FEGQDTSFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIVYY 99
           F G   +F  CLI++IR  +SH            D  EHG   II C T L   G I+YY
Sbjct: 47  FAGLGIAFIYCLIAFIRE-MSHPSSR-------KDTMEHGL-PIILCST-LMLVGNILYY 96


>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 466

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +1

Query: 463 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 570
           PP   P    +  T PV  PV+    A   P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -2

Query: 241 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 125
           S T +SF   P+PT  P    LPT   NT +    P+ PAL
Sbjct: 64  SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101


>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 226

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +3

Query: 384 LLTEAPLNPKANREKMTQIMFETFN 458
           +L  APL+ +   +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205


>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
           Tor2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2337

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 278 FEGQDTSFALCLISYIRVLLSHTDHHA 198
           +EG+DT+      +Y+R++L  TD  A
Sbjct: 74  YEGEDTTRITRFANYLRIILPGTDQKA 100


>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1016

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 469 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 612
           C +PS+    C    + PV   +  T S TP P+T  + +PTP+   T
Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTST 869


>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1628

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +2

Query: 398  SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRR 547
            +PQ +    E++ D++R++  +RH RR P +A  +  R  H  +   R R
Sbjct: 1428 TPQSRSFTNENN-DNLRSV--SRHTRREPQQAQNLNARREHESQKSDRWR 1474


>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
            |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1224

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
 Frame = +1

Query: 481  SKPCSRCTRPVVPPVSCWT---PATVSPTPCPSTRDT-HSPTPSCVWT*PV 621
            S+  S  T P  PP +  T   PA  SP P P   +T H PT S     PV
Sbjct: 899  SRTSSVSTLPPPPPTASMTASAPAIASPPP-PKVGETYHPPTASGTRVPPV 948


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,099,547
Number of Sequences: 5004
Number of extensions: 71290
Number of successful extensions: 270
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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