Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30031
(383 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519... 81 2e-16
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155... 81 2e-16
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973... 81 2e-16
07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581... 79 9e-16
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399... 79 9e-16
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087... 79 9e-16
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046... 79 9e-16
07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561 38 0.002
05_03_0263 + 11234850-11235044,11235413-11237341 31 0.41
01_06_1133 + 34781799-34782071,34782168-34783166,34783252-347836... 30 0.72
07_03_1268 + 25328448-25328506,25328589-25328768,25328872-253289... 29 1.3
12_02_1118 + 26210322-26212559 28 2.2
03_05_0671 + 26608953-26609671,26609775-26610495 28 2.2
12_02_0879 + 23960084-23961551,23961796-23962184 28 2.9
05_05_0266 - 23694466-23696787,23696885-23697187 28 2.9
07_03_0284 + 16249497-16249993,16250950-16251069,16251166-162512... 27 3.8
05_05_0226 + 23442971-23443857,23444209-23446324 27 3.8
11_06_0050 + 19631164-19631987,19632103-19634023 27 5.1
10_06_0010 + 9574265-9574524,9574629-9574956,9576663-9576788,957... 27 6.7
06_01_0093 - 776567-777335,777449-777747 27 6.7
06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998 26 8.9
>07_03_0646 +
20250684-20250686,20251522-20251701,20251899-20251973,
20252072-20252131
Length = 105
Score = 81.4 bits (192), Expect = 2e-16
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +2
Query: 23 MVNVPKQRRTYXXXXXXXXXXXX--TQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 196
MVNVPK ++TY TQYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 197 XXXXXXXIVLRLECADCK 250
IVL+L+C CK
Sbjct: 61 KAKTTKKIVLKLQCQSCK 78
Score = 39.9 bits (89), Expect = 7e-04
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 256 SQVALKRCKHFELGGDKKRKG 318
SQ +KRCKHFE+GGDKK KG
Sbjct: 81 SQHPIKRCKHFEIGGDKKGKG 101
>07_03_0641 +
20214245-20214247,20215086-20215265,20215463-20215537,
20215636-20215695
Length = 105
Score = 81.4 bits (192), Expect = 2e-16
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +2
Query: 23 MVNVPKQRRTYXXXXXXXXXXXX--TQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 196
MVNVPK ++TY TQYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 197 XXXXXXXIVLRLECADCK 250
IVL+L+C CK
Sbjct: 61 KAKTTKKIVLKLQCQSCK 78
Score = 39.9 bits (89), Expect = 7e-04
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 256 SQVALKRCKHFELGGDKKRKG 318
SQ +KRCKHFE+GGDKK KG
Sbjct: 81 SQHPIKRCKHFEIGGDKKGKG 101
>07_03_0226 +
15395380-15395382,15396993-15397172,15397286-15397360,
15397466-15397525
Length = 105
Score = 81.4 bits (192), Expect = 2e-16
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +2
Query: 23 MVNVPKQRRTYXXXXXXXXXXXX--TQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 196
MVNVPK ++TY TQYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 197 XXXXXXXIVLRLECADCK 250
IVL+L+C CK
Sbjct: 61 KAKTTKKIVLKLQCQSCK 78
Score = 39.9 bits (89), Expect = 7e-04
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 256 SQVALKRCKHFELGGDKKRKG 318
SQ +KRCKHFE+GGDKK KG
Sbjct: 81 SQHPIKRCKHFEIGGDKKGKG 101
>07_03_0648 +
20257442-20257528,20257688-20257867,20258055-20258129,
20258230-20258289
Length = 133
Score = 79.4 bits (187), Expect = 9e-16
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = +2
Query: 26 VNVPKQRRTYXXXXXXXXXXXX--TQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 199
VNVPK ++TY TQYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 200 XXXXXXIVLRLECADCK 250
IVL+L+C CK
Sbjct: 90 AKTTKKIVLKLQCQSCK 106
Score = 39.9 bits (89), Expect = 7e-04
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 256 SQVALKRCKHFELGGDKKRKG 318
SQ +KRCKHFE+GGDKK KG
Sbjct: 109 SQHPIKRCKHFEIGGDKKGKG 129
>07_03_0643 +
20239224-20239310,20239470-20239649,20239837-20239911,
20240012-20240071
Length = 133
Score = 79.4 bits (187), Expect = 9e-16
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = +2
Query: 26 VNVPKQRRTYXXXXXXXXXXXX--TQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 199
VNVPK ++TY TQYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 200 XXXXXXIVLRLECADCK 250
IVL+L+C CK
Sbjct: 90 AKTTKKIVLKLQCQSCK 106
Score = 39.9 bits (89), Expect = 7e-04
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 256 SQVALKRCKHFELGGDKKRKG 318
SQ +KRCKHFE+GGDKK KG
Sbjct: 109 SQHPIKRCKHFEIGGDKKGKG 129
>07_03_0640 +
20207497-20207554,20208457-20208482,20208522-20208701,
20208891-20208965,20209062-20209121
Length = 132
Score = 79.4 bits (187), Expect = 9e-16
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = +2
Query: 26 VNVPKQRRTYXXXXXXXXXXXX--TQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 199
VNVPK ++TY TQYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 29 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 88
Query: 200 XXXXXXIVLRLECADCK 250
IVL+L+C CK
Sbjct: 89 AKTTKKIVLKLQCQSCK 105
Score = 39.9 bits (89), Expect = 7e-04
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 256 SQVALKRCKHFELGGDKKRKG 318
SQ +KRCKHFE+GGDKK KG
Sbjct: 108 SQHPIKRCKHFEIGGDKKGKG 128
>07_03_0639 +
20203902-20203988,20204152-20204331,20204529-20204603,
20204696-20204755
Length = 133
Score = 79.4 bits (187), Expect = 9e-16
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = +2
Query: 26 VNVPKQRRTYXXXXXXXXXXXX--TQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 199
VNVPK ++TY TQYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 200 XXXXXXIVLRLECADCK 250
IVL+L+C CK
Sbjct: 90 AKTTKKIVLKLQCQSCK 106
Score = 39.9 bits (89), Expect = 7e-04
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 256 SQVALKRCKHFELGGDKKRKG 318
SQ +KRCKHFE+GGDKK KG
Sbjct: 109 SQHPIKRCKHFEIGGDKKGKG 129
>07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561
Length = 62
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1
Query: 256 SQVALKRCKHFELGGDKKRKG 318
SQ +KRCKHF++GGDKK KG
Sbjct: 38 SQHPIKRCKHFKIGGDKKGKG 58
>05_03_0263 + 11234850-11235044,11235413-11237341
Length = 707
Score = 30.7 bits (66), Expect = 0.41
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -2
Query: 118 PFLGLFVLCYLVYFVAFTFFAVRPALFW 35
PF+ L+VL V FV +FF +RP L W
Sbjct: 138 PFVSLWVLLSGVGFVLSSFFFIRPLLSW 165
>01_06_1133 +
34781799-34782071,34782168-34783166,34783252-34783663,
34783727-34784670
Length = 875
Score = 29.9 bits (64), Expect = 0.72
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 106 LFVLCYLVYFVAFTFFAVRPALFWYV 29
L+VL V FV F F+ VRP ++W +
Sbjct: 252 LWVLLAGVLFVLFCFYVVRPGMWWLI 277
>07_03_1268 +
25328448-25328506,25328589-25328768,25328872-25328974,
25329095-25329119,25329587-25329614,25330603-25330755,
25331339-25333421,25333666-25334983,25335256-25335339,
25335756-25335769
Length = 1348
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 96 STKSPRKGTLPRVEDVMIVNSRV 164
++ SP+K T PRVED M++ S +
Sbjct: 451 ASSSPQKQTAPRVEDDMVITSSI 473
>12_02_1118 + 26210322-26212559
Length = 745
Score = 28.3 bits (60), Expect = 2.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 118 PFLGLFVLCYLVYFVAFTFFAVRPALFW 35
P + L+VL FVA F +RPAL W
Sbjct: 163 PIISLWVLLTAAGFVAAIFLFLRPALAW 190
>03_05_0671 + 26608953-26609671,26609775-26610495
Length = 479
Score = 28.3 bits (60), Expect = 2.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 253 ESQVALKRCKHFELGGDKKRKGQMIQF*MLLINK 354
E +A + CKHFE + R G I+ ++ INK
Sbjct: 354 EEYIAAQDCKHFEAASYEDRNGNSIRNVIVPINK 387
>12_02_0879 + 23960084-23961551,23961796-23962184
Length = 618
Score = 27.9 bits (59), Expect = 2.9
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +3
Query: 30 TYQNSAGRTAKNVNATKYTR*HSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKP 209
T ++S G +K V ATK+ R +S +P+V+++ V S TV+ + S RQ
Sbjct: 315 TIESSNG--SKVVRATKFNRDKKFRSTVASNVPKVKEIK-VTSPATVMDQS-SKPTRQSK 370
Query: 210 LRKL 221
L+ L
Sbjct: 371 LKSL 374
>05_05_0266 - 23694466-23696787,23696885-23697187
Length = 874
Score = 27.9 bits (59), Expect = 2.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 115 FLGLFVLCYLVYFVAFTFFAVRPALFWYV 29
F L+VL V FV F+ VRP ++W V
Sbjct: 259 FSSLWVLIAGVAFVLACFYVVRPLMWWIV 287
>07_03_0284 +
16249497-16249993,16250950-16251069,16251166-16251298,
16251867-16252031,16253289-16253459
Length = 361
Score = 27.5 bits (58), Expect = 3.8
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -1
Query: 170 HRNPAVYDHNVFYPGQRAFPWTFCTVLPCVLCGIYIFCSTSCAVLV 33
H P +Y ++ + F FC L CV+ GI + C C + +
Sbjct: 199 HDAPQLYWLSIVFLAFDVFFVVFCVALACVI-GIAVCCCLPCIIAI 243
>05_05_0226 + 23442971-23443857,23444209-23446324
Length = 1000
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 141 RLLPWAACLSLDFLYCVTLCTLWHLHFLQY 52
R+L C LD + +C LWHL +L +
Sbjct: 595 RVLDLQECSDLDDDHLKYICKLWHLKYLSF 624
>11_06_0050 + 19631164-19631987,19632103-19634023
Length = 914
Score = 27.1 bits (57), Expect = 5.1
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -3
Query: 141 RLLPWAACLSLDFLYCVTLCTLWHLHFLQ 55
R+L ++ C ++ +C +C L+HL +L+
Sbjct: 577 RVLDFSGCDKVENQHCKDICKLFHLRYLR 605
>10_06_0010 +
9574265-9574524,9574629-9574956,9576663-9576788,
9576948-9577067,9577350-9577562,9577653-9577764,
9578033-9578217,9578310-9578660,9578826-9579383
Length = 750
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 123 ACLSLDFLYCVTLCTLWHLHFLQYVLRCFG-TFTIFEFVRHD 1
AC + + +T + W L FL +L+ G + T+FE R D
Sbjct: 598 ACWNNHRMQRITSASAWLLAFLTVILKTLGFSETVFEVTRKD 639
>06_01_0093 - 776567-777335,777449-777747
Length = 355
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -2
Query: 322 SVPFSSCHHQAQSACISSMQPVIHLAISTLKTEHN-FLSGFCLLFE 188
++PF+ H + S +S+ P++ L + + T + +SG+CL+ +
Sbjct: 62 NLPFAPYSHHSSSDPMSASNPLVSLLPAMVLTSYYAHVSGYCLVVD 107
>06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998
Length = 391
Score = 26.2 bits (55), Expect = 8.9
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 42 SAGRTAKNVNATKYTR*HSTKSPRKGTLPR 131
S+GRTA++ + R H T RKG LPR
Sbjct: 99 SSGRTARDAAVAQQERHHDTIKRRKG-LPR 127
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,045,852
Number of Sequences: 37544
Number of extensions: 192450
Number of successful extensions: 546
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 636799876
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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