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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30021
         (374 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0339 - 22400534-22400647,22401264-22401398,22401491-224015...    70   5e-13
08_02_1576 + 27965862-27965864,27965952-27966026,27966113-279662...    70   5e-13
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249...    56   1e-08
03_05_0586 - 25875703-25876332,25876426-25876713,25877064-258771...    30   0.68 
10_01_0146 - 1719997-1720386,1721498-1721515                           28   2.7  
06_03_1117 + 27750291-27750338,27751360-27751812,27751987-277521...    27   3.6  
04_03_0916 + 20794240-20794246,20794585-20796545                       27   3.6  
02_03_0349 + 18010414-18014283                                         27   3.6  
02_02_0501 - 10999203-10999754,11000724-11001460,11001461-110018...    27   3.6  
05_03_0561 - 15476484-15476649,15476814-15476893,15476971-154770...    27   4.8  
03_05_0742 + 27310404-27310457,27311281-27311286,27311350-273114...    27   4.8  
12_02_1263 + 27423411-27423464,27423985-27424104,27424200-274242...    27   6.3  
08_02_1171 + 24880363-24881355,24882553-24882702,24883505-248842...    27   6.3  
04_04_1699 + 35462160-35462555,35463114-35463196,35463317-354633...    27   6.3  
02_05_0072 - 25598690-25598702,25598820-25599001,25599111-255992...    27   6.3  
11_06_0621 + 25587476-25587604,25588230-25588423,25588800-255888...    26   8.4  
03_06_0766 - 36106116-36106230,36106598-36106716,36106880-361069...    26   8.4  
02_05_0114 + 25958834-25961296                                         26   8.4  
02_02_0060 + 6446317-6446871,6447836-6448276,6449035-6449265,644...    26   8.4  

>09_06_0339 -
           22400534-22400647,22401264-22401398,22401491-22401565,
           22401646-22401648
          Length = 108

 Score = 70.1 bits (164), Expect = 5e-13
 Identities = 31/48 (64%), Positives = 41/48 (85%)
 Frame = +1

Query: 109 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIEL 252
           +NN VLFD+ TY+KL  EVP+YK ITP+V+SERL++ GSLARRA+ +L
Sbjct: 37  VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAMKDL 84



 Score = 27.5 bits (58), Expect = 3.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +3

Query: 255 EKGLIKQVVQHHGQVIYTRAT 317
           ++GLI+ V  H  Q IYTRAT
Sbjct: 86  DRGLIRMVSVHCSQQIYTRAT 106


>08_02_1576 +
           27965862-27965864,27965952-27966026,27966113-27966247,
           27967080-27967193
          Length = 108

 Score = 70.1 bits (164), Expect = 5e-13
 Identities = 31/48 (64%), Positives = 41/48 (85%)
 Frame = +1

Query: 109 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIEL 252
           +NN VLFD+ TY+KL  EVP+YK ITP+V+SERL++ GSLARRA+ +L
Sbjct: 37  VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDL 84



 Score = 27.5 bits (58), Expect = 3.6
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 258 KGLIKQVVQHHGQVIYTRAT 317
           +GLI+ V  H  Q IYTRAT
Sbjct: 87  RGLIRMVSVHSSQQIYTRAT 106


>11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,
            2496476-2496577,2496853-2497003,2497173-2497222,
            2497432-2497557,2497761-2497863,2498104-2498204,
            2498540-2498677,2498768-2498911,2499028-2499103,
            2499224-2499309,2499432-2499560,2500572-2500674,
            2500776-2500843,2500912-2501013,2501432-2501527,
            2501723-2501848,2502152-2502254,2502427-2502569,
            2503017-2503154,2503248-2503391,2503535-2503610,
            2503883-2503968,2504135-2504212,2505180-2505254,
            2505362-2505496,2506240-2506272,2507886-2507905,
            2508570-2508666,2508899-2509000,2510612-2510725
          Length = 1126

 Score = 55.6 bits (128), Expect = 1e-08
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = +1

Query: 109  LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLK 213
            +NN VLFDK TY+KL  EVP+YK ITP+V+SERL+
Sbjct: 971  VNNSVLFDKATYDKLLSEVPKYKQITPSVLSERLR 1005


>03_05_0586 -
           25875703-25876332,25876426-25876713,25877064-25877194,
           25877299-25877812
          Length = 520

 Score = 29.9 bits (64), Expect = 0.68
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 6   GFGQTASKNTEEEGRIRWRQSQEEEVVQRKSS*QVEQPGV 125
           G G  + +   E G+ +WR+ +EEE  Q+K   + E+  V
Sbjct: 347 GRGGESEERRRERGKGKWREEEEEEEEQQKGQEEEEEEQV 386


>10_01_0146 - 1719997-1720386,1721498-1721515
          Length = 135

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 8   LRPNSLKKHRRRRKDPVAAKPRRRS 82
           ++P+   + RRRR +P   +PRRR+
Sbjct: 81  MQPDDGGQRRRRRSEPATTQPRRRA 105


>06_03_1117 +
           27750291-27750338,27751360-27751812,27751987-27752161,
           27752227-27752551,27752705-27752786,27752820-27752889,
           27753341-27753420,27753514-27753750
          Length = 489

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 6   GFGQTASKNTEEEGRIRWRQSQEEEVVQRKSS*QVEQPG 122
           GFG   S N+     +RWR  + +++ Q     Q ++PG
Sbjct: 427 GFGIAISANSMLVEYLRWRSRRNQQLAQTVDDGQRQEPG 465


>04_03_0916 + 20794240-20794246,20794585-20796545
          Length = 655

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -2

Query: 199 IRQQV*LACTVGLPCTVSH-MWVYQTTPGCSTCHELFLWTTSSSWLCRHRI 50
           I Q + L   +G  C     + VY+  P  S  H+LF   T+ +W  R+ I
Sbjct: 399 IIQHINLVKLIGFCCEGGRRLLVYEHMPNRSLDHQLFQTNTTLTWNIRYEI 449


>02_03_0349 + 18010414-18014283
          Length = 1289

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 133 KPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELRKKV 264
           KPT E+L K +PQ K++  AV  E +  +       L +LR  V
Sbjct: 39  KPTRERLEKLLPQIKVVLDAVDMEHIGDQSDALDAWLWQLRDAV 82


>02_02_0501 -
           10999203-10999754,11000724-11001460,11001461-11001836,
           11001917-11001946,11002718-11002912,11003604-11004149
          Length = 811

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 21/68 (30%), Positives = 35/68 (51%)
 Frame = -1

Query: 335 DWIIALGRTRVDHLPMMLDYLFDETFFLSSMSALLAREPRTFNLSDTTAGVISLYCGTSL 156
           +W+I  G  +  H+ +   Y +    FLS+M   LAR P TF+ + + A V +     + 
Sbjct: 662 EWLIKKGLAKPGHIGL---YGWSYGGFLSAMC--LARFPDTFSCAVSGAPVTAWDGYDTF 716

Query: 155 YSFSYVGL 132
           Y+  Y+GL
Sbjct: 717 YTEKYMGL 724


>05_03_0561 -
           15476484-15476649,15476814-15476893,15476971-15477030,
           15477117-15477210,15477287-15477421,15477601-15477656,
           15478359-15478460,15478544-15478651,15479206-15479283,
           15479432-15479521,15480061-15480123
          Length = 343

 Score = 27.1 bits (57), Expect = 4.8
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
 Frame = -1

Query: 344 SLCDWI-----IALGRTRVDHLPMMLDYLFDETFFLSSMSALLAREPRTFNLSDTTA 189
           S+C+W      IA G+  V+H    +   F+E +F SS      R  R F +  TTA
Sbjct: 266 SVCEWFKDYQPIAPGKQEVEHAYEFVKKKFEELYFQSSKP---DRVDRVFKIYRTTA 319


>03_05_0742 +
           27310404-27310457,27311281-27311286,27311350-27311469,
           27311597-27311695,27311787-27311795,27311843-27311980,
           27312084-27312218,27312308-27312517,27312592-27312798,
           27312891-27313010,27313079-27313198,27313279-27313401,
           27313501-27313605,27313764-27313908,27314658-27315148,
           27315236-27315268,27315556-27315637,27315747-27315907,
           27316021-27316206,27316294-27316476,27316573-27316751,
           27317009-27317105
          Length = 1000

 Score = 27.1 bits (57), Expect = 4.8
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = -1

Query: 212 FNLSDTTAGVISLYCGTSLYSFSYVGL--SNNTWLFNLSRTFPLDHFFFL 69
           F ++   A +I++Y   +  S   +G   +   WL+NL   FPLD   FL
Sbjct: 843 FFVAQLIATLIAVYANWAFTSIKGIGWGWAGIVWLYNLVFYFPLDIIKFL 892


>12_02_1263 +
           27423411-27423464,27423985-27424104,27424200-27424298,
           27424405-27424542,27424647-27424706,27424865-27425044,
           27425132-27425338,27425415-27425534,27425609-27425728,
           27425819-27425941,27426074-27426178,27426379-27426523,
           27426967-27427131,27427228-27427466,27427553-27427585,
           27427894-27427975,27428100-27428260,27428422-27428607,
           27428700-27428882,27428969-27429147,27429386-27429482
          Length = 931

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = -1

Query: 212 FNLSDTTAGVISLYCGTSLYSFSYVGL--SNNTWLFNLSRTFPLDHFFFL 69
           F ++   A +I++Y   +  S   +G   +   WL+NL   FPLD   FL
Sbjct: 774 FLVAQLIATLIAVYADWAFTSIKGIGWGWAGIVWLYNLIFYFPLDIIKFL 823


>08_02_1171 +
           24880363-24881355,24882553-24882702,24883505-24884210,
           24885012-24885404,24885759-24885805,24886088-24886111
          Length = 770

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 356 NLYHSLCDWIIALGRTRVDHLPMMLDYLF 270
           NL+H++ DW  A   +RV  LP   + +F
Sbjct: 347 NLFHTITDWYSAYVSSRVTDLPNRPNVVF 375


>04_04_1699 +
           35462160-35462555,35463114-35463196,35463317-35463378,
           35463745-35463806,35463932-35463991,35464079-35464111,
           35464196-35464261,35464349-35464393
          Length = 268

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 2   RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 88
           R+  P    KHRR R D  A  PR+R  P
Sbjct: 31  RQRPPPGPTKHRRLRHDADAQPPRKRGHP 59


>02_05_0072 -
           25598690-25598702,25598820-25599001,25599111-25599269,
           25599450-25599753,25600176-25600332,25600439-25600484
          Length = 286

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +2

Query: 227 WREEHSSSLGKRSHQTGSPTSWAGDLHACD 316
           WR E S      SH TG   +   DLH  D
Sbjct: 173 WRLEESQMTSGTSHYTGETEAVKQDLHTAD 202


>11_06_0621 +
           25587476-25587604,25588230-25588423,25588800-25588874,
           25589434-25591852
          Length = 938

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 172 TVGLPCTVSHMWVYQTTPGCSTCHELFLWTTSSSWLCRHRILPS 41
           T   PC++S M V      C TC+++       S +CR  ++PS
Sbjct: 264 TCATPCSLSFM-VDCLIKACITCYDVQATICLFSGICRLGVVPS 306


>03_06_0766 -
           36106116-36106230,36106598-36106716,36106880-36106960,
           36107062-36107118,36107350-36107373,36107810-36107909,
           36107983-36108053,36108132-36108236,36108674-36108847,
           36109406-36109555,36109701-36109871,36109968-36110024,
           36110107-36110142,36110165-36110357,36110439-36110578,
           36110960-36111166,36111442-36111498,36111711-36111809,
           36112289-36112408,36112865-36113032,36113450-36113510,
           36113611-36113720,36114132-36114263,36114344-36114511,
           36115118-36115182,36115242-36115372,36115450-36115487,
           36116272-36116373,36116480-36116537,36117479-36117580,
           36117695-36117909,36118158-36118307,36118699-36118858,
           36118984-36119042,36119287-36119443,36119536-36119681,
           36121376-36121648,36122889-36122891
          Length = 1457

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 148 KLYKEVPQYKLITPAVVSERLKVRGSLARRALIELR 255
           + Y  +  YK +  A+++ +   RG +ARR L EL+
Sbjct: 770 RCYLVLSNYKRMMKAIITTQCAWRGRVARRELRELK 805


>02_05_0114 + 25958834-25961296
          Length = 820

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 172 TVGLPCTVSHMWVYQTTPGCSTCHELFLWTTSSSWLCRHRILPS 41
           T   PC++S M V      C TC+++       S +CR  ++PS
Sbjct: 146 TCATPCSLSFM-VDCLIKACITCYDVQATICLFSGICRLGVVPS 188


>02_02_0060 +
           6446317-6446871,6447836-6448276,6449035-6449265,
           6449382-6449473,6449555-6449615,6451541-6451618,
           6451853-6452014
          Length = 539

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 330 DHRPWSHACRSPAHDVGL 277
           DH+P  H+ RS  H++G+
Sbjct: 431 DHKPMGHSARSLIHNIGV 448


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,538,424
Number of Sequences: 37544
Number of extensions: 218344
Number of successful extensions: 692
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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