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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00015
         (568 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771...    74   9e-14
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576...    66   1e-11
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310...    61   7e-10
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575...    50   1e-06
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530...    35   0.039
01_05_0336 - 21111048-21111800                                         31   0.85 
07_03_0759 - 21299502-21299807,21299889-21300039,21300151-213003...    30   1.1  
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931     30   1.1  
07_01_0489 + 3694562-3695269                                           30   1.5  
03_01_0249 - 1935355-1935827,1936129-1936330                           30   1.5  
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319     30   1.5  
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443     29   2.0  
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110     29   2.6  
10_08_0724 + 20114796-20115506                                         29   3.4  
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188     29   3.4  
10_08_0725 + 20126821-20127528                                         28   4.5  
05_01_0462 - 3658153-3658290,3658394-3658540,3658622-3658720,365...    28   4.5  
04_04_1142 + 31194801-31194952,31195548-31196037,31196463-311965...    27   7.9  
01_06_0342 - 28562233-28562610,28562688-28563023                       27   7.9  
01_02_0049 + 10641363-10641563,10641640-10641750,10641893-106421...    27   7.9  

>11_02_0046 +
           7711536-7711568,7711685-7711850,7712251-7712339,
           7712443-7712514,7712807-7712860,7713000-7713075,
           7713238-7713299,7713445-7713504,7713663-7713773
          Length = 240

 Score = 73.7 bits (173), Expect = 9e-14
 Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
 Frame = +2

Query: 254 LEETRPQRPLMPQDCFKRAKVREICEMIASGIQPLQNLIVLIYVGE----ETKKEWSQHW 421
           LE+T PQ PL+PQD   +A   +I  ++ S IQPLQN  VL ++ E    + K  W Q+ 
Sbjct: 98  LEDTYPQHPLLPQDPKMKALNIQIASIVGSSIQPLQNNSVLDFIEEKLDSQEKVNWIQYH 157

Query: 422 VTRGFRAIEKLLSTTAGKYCVGDEITLAD 508
           + RGF A+EK+L      Y  GDEI L D
Sbjct: 158 LNRGFTALEKMLKGCTTTYATGDEIQLGD 186



 Score = 50.8 bits (116), Expect = 7e-07
 Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = +3

Query: 63  SCSWRVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQVPSLCIDGH--TLIES 236
           SCS+RVRIAL+LK + Y+ K ++L+    EQ   E+  +NPM+ VP+L +DG    +++S
Sbjct: 35  SCSYRVRIALSLKGLDYEYKPINLL--ANEQSHPEFEKLNPMKYVPAL-VDGDDTVVVDS 91

Query: 237 LNIMHY 254
             I+ Y
Sbjct: 92  FAILLY 97


>12_01_0675 +
           5759641-5759722,5760247-5760291,5760690-5760775,
           5760888-5760959,5761210-5761263,5761385-5761460,
           5761778-5761839,5762174-5762233,5762331-5762432
          Length = 212

 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
 Frame = +2

Query: 254 LEETRPQRPLMPQDCFKRAKVREICEMIASGIQPLQNLIVL-IYVGEETKKEWSQ---HW 421
           LE+  PQ  L+P+D  K+A   +I  ++ S IQPLQ   V+ ++ G+ +  E  Q   H+
Sbjct: 73  LEDKYPQHALLPKDLKKKALNLQIANIVCSSIQPLQGYAVIGLHEGKLSPDESLQIVQHY 132

Query: 422 VTRGFRAIEKLLSTTAGKYCVGDEITLAD 508
           + +GF+AIEKLL  +  KY  GDE+ L D
Sbjct: 133 IDKGFKAIEKLLEGSNFKYATGDEVQLGD 161



 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +3

Query: 63  SCSWRVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQVPSLCIDGHTLI-ESL 239
           SCS R+RI LNLK + Y+ K+V+       +   +Y  +NP++ +P+L +DG  ++ +SL
Sbjct: 15  SCSHRIRIVLNLKGVDYEYKSVN------PRTDPDYEKINPIKYIPAL-VDGDLVVSDSL 67

Query: 240 NIMHY 254
            I  Y
Sbjct: 68  AIALY 72


>02_04_0267 -
           21430370-21430474,21430559-21430618,21430937-21431046,
           21431220-21431295,21431541-21431594,21431935-21432006,
           21432088-21432173,21432694-21432750,21432886-21432991
          Length = 241

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 40/105 (38%), Positives = 52/105 (49%), Gaps = 20/105 (19%)
 Frame = +2

Query: 254 LEETRPQRPLMPQDCFKRAKVREICEMIASGIQPLQNLIVLIY----VGEETKKEWSQHW 421
           LE+  P+ PL+PQD   +A   +I  ++ SGIQPL NL VL +    VG      W+Q  
Sbjct: 85  LEDKYPEHPLLPQDLKMKALNLQIASIVCSGIQPLHNLTVLRFIEKKVGTGESIPWTQQQ 144

Query: 422 VTRGFR----------------AIEKLLSTTAGKYCVGDEITLAD 508
           + RGF                 A E L+   AGKY  GDE+ LAD
Sbjct: 145 IDRGFADLLLCHTMLTSFPNGVAAENLVKGCAGKYATGDEVRLAD 189



 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = +3

Query: 63  SCSWRVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQVPSLCIDGHTLI 230
           SCS RVRIALNLK + Y+ KAV+L+K  GE    E+  VNPM+ VP+L +DG  +I
Sbjct: 23  SCSHRVRIALNLKGLEYEYKAVNLLK--GEHSDPEFMKVNPMKFVPAL-VDGDAVI 75


>12_01_0674 +
           5755523-5755613,5756325-5756366,5756830-5756915,
           5757008-5757079,5757450-5757525,5757765-5757826,
           5758119-5758178,5758293-5758394
          Length = 196

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 32/85 (37%), Positives = 43/85 (50%)
 Frame = +2

Query: 254 LEETRPQRPLMPQDCFKRAKVREICEMIASGIQPLQNLIVLIYVGEETKKEWSQHWVTRG 433
           LE+  PQ PL+PQD  K+A   +    +A G       + ++           QH+  +G
Sbjct: 75  LEDKYPQHPLLPQDLKKKALNMQ---GLADGKMSANESLQIV-----------QHYTDKG 120

Query: 434 FRAIEKLLSTTAGKYCVGDEITLAD 508
           FRAIEKLL     KY  GDE+ LAD
Sbjct: 121 FRAIEKLLEGCRSKYATGDEVQLAD 145



 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 28/64 (43%), Positives = 41/64 (64%)
 Frame = +3

Query: 63  SCSWRVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQVPSLCIDGHTLIESLN 242
           SCS+RVRIALNLK I Y+ +AV+  +G       +Y  +NP++ VP+L     T+ +SL 
Sbjct: 18  SCSYRVRIALNLKGIDYEYRAVT--RGD-----PDYGKINPIKYVPALVDGDFTISDSLA 70

Query: 243 IMHY 254
           I+ Y
Sbjct: 71  IILY 74


>01_04_0021 -
           15151645-15151809,15152184-15152343,15152548-15153025,
           15153243-15153291,15153585-15153734
          Length = 333

 Score = 35.1 bits (77), Expect = 0.039
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +3

Query: 72  WRVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQVPSLCIDGHTLIESLNIMH 251
           W  R+ + L+E   + + V + + GG+    E+ A NP  ++P L     TL +S  I  
Sbjct: 14  WMARVLVALEEAGAEYEVVPMSRSGGDHRRPEHLARNPFGEIPVLEDGDLTLYQSRAIAR 73

Query: 252 Y 254
           Y
Sbjct: 74  Y 74


>01_05_0336 - 21111048-21111800
          Length = 250

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 75  RVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPME-QVPSLCIDGHTLIESLNIMH 251
           RVR+ALNLK + Y+   V L    G+   +   A NP+  +VP L   G  + ES+ I+ 
Sbjct: 28  RVRLALNLKGLSYEYVEVDL---AGKS--DLLLAANPVHAKVPVLLHAGRPVCESMLIVE 82

Query: 252 Y 254
           Y
Sbjct: 83  Y 83


>07_03_0759 -
           21299502-21299807,21299889-21300039,21300151-21300388,
           21300729-21300939,21301018-21301133,21301388-21301519,
           21302179-21303073
          Length = 682

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 33  AASIILILAHSCSWRVRIALNLKEIPYDIKAV 128
           AA +++++A+ C WR R       +PYDI+++
Sbjct: 317 AAMLLIVVAYFCCWRRRRPEEQTFLPYDIQSI 348


>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
          Length = 218

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +3

Query: 81  RIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQVPSLCIDGHTLIESLNIMHY 254
           R+ + L+E+  D + V++    GEQ+  E+   NP  ++P+L      L ES  I  Y
Sbjct: 17  RVLVCLEEVGADYELVTVDFLAGEQNSPEHVERNPFGKIPALQDGDLVLFESRAIAKY 74


>07_01_0489 + 3694562-3695269
          Length = 235

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 75  RVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPM-EQVPSLCIDGHTLIESLNIMH 251
           RVR+ALNLK + Y+     +  GGG+       A NP+ ++VP L    + + ES  I+ 
Sbjct: 26  RVRLALNLKGLAYEFIEEEI--GGGKSEL--LLASNPVHKKVPVLLHRSNPICESQVIVQ 81

Query: 252 Y 254
           Y
Sbjct: 82  Y 82


>03_01_0249 - 1935355-1935827,1936129-1936330
          Length = 224

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = +3

Query: 75  RVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQVPSLCIDGHTLIESLNIMHY 254
           RV   L  K++P+ ++ V + KG  E     +  + P  QVP+      T+ ES  I  Y
Sbjct: 18  RVAACLLEKDVPFQVEPVDMSKG--EHKSPSFLKLQPFGQVPAFKDSLTTVFESRAICRY 75


>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
          Length = 221

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 22/65 (33%), Positives = 31/65 (47%)
 Frame = +3

Query: 81  RIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQVPSLCIDGHTLIESLNIMHY*R 260
           R+ L L+E+  D + V +  G  E    ++ A NP  QVP+       L ES  I  Y  
Sbjct: 17  RVLLCLEEVGADYEIVDVDFGDREHKGPDHLARNPFGQVPAFQDGDLMLFESRAICRYIL 76

Query: 261 RQDHR 275
           R+ HR
Sbjct: 77  RK-HR 80


>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
          Length = 221

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = +3

Query: 75  RVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQVPSLCIDGHTLIESLNIMHY 254
           RV   LN K + +D+  V L     +Q    + A+NP  Q+P L      L ES  I  Y
Sbjct: 21  RVATVLNEKGLDFDLVPVDLRTAAHKQP--HFLALNPFGQIPVLQDGDEVLYESRAINRY 78


>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
          Length = 215

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = +3

Query: 69  SWRV-RIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQVPSLCIDGHTLIESLNI 245
           SW V R    L+E   + + V L    GE    ++ A NP  QVP+L      L ES  I
Sbjct: 12  SWNVTRCVAVLEEAGAEYEIVPLDFSKGEHKAPDHLARNPFGQVPALQDGDLFLWESRAI 71

Query: 246 MHY*RRQDHRGLL 284
             Y  R++   LL
Sbjct: 72  CKYVCRKNKPELL 84


>10_08_0724 + 20114796-20115506
          Length = 236

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 75  RVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPM-EQVPSLCIDGHTLIESLNIMH 251
           RVR+ LNLK +PY+    +L    G++  +   A NP+ + VP L   G  + ES  I+ 
Sbjct: 20  RVRVVLNLKSLPYEYVEENL----GDK-SDLLLASNPVHKSVPVLLHAGRPVNESQVIVQ 74

Query: 252 Y 254
           Y
Sbjct: 75  Y 75


>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
          Length = 216

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 21/69 (30%), Positives = 32/69 (46%)
 Frame = +3

Query: 78  VRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQVPSLCIDGHTLIESLNIMHY* 257
           +RI + L+E+  + + V +    GE     + + NP  QVP+      TL ES  I  Y 
Sbjct: 16  MRILVCLEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFEDGDLTLFESRAISKYI 75

Query: 258 RRQDHRGLL 284
            R+    LL
Sbjct: 76  LRKHGSDLL 84


>10_08_0725 + 20126821-20127528
          Length = 235

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +3

Query: 75  RVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQ-VPSLCIDGHTLIESLNIMH 251
           RVR  LNLK +PY+    +L    G++  +   A NP+ + VP L   G  + ES  I+ 
Sbjct: 20  RVRFVLNLKSLPYEFVEENL----GDK-SDLLLASNPVNKTVPVLLHAGRPVNESQVILQ 74

Query: 252 Y 254
           Y
Sbjct: 75  Y 75


>05_01_0462 -
           3658153-3658290,3658394-3658540,3658622-3658720,
           3658802-3659253,3659597-3660280,3662072-3662180
          Length = 542

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -3

Query: 392 PHQHKLAQSDSAMAVFLRLSFHKFHELLPA*SNL--EA*EASVVLSPLVMHD 243
           P    +  S SA +  +R S+H FH L+   +NL   A E  ++L  LV+H+
Sbjct: 376 PRHVSVGGSGSARSRRMRDSYHGFHHLMIEDNNLGRSAAERFMMLDQLVIHE 427


>04_04_1142 +
           31194801-31194952,31195548-31196037,31196463-31196546,
           31196611-31196682,31196967-31197026,31197299-31197310
          Length = 289

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 242 HHALLEETRPQRPLMPQDCFKRAKVREICEMIASGI 349
           HHAL       + L+P DCF       +CE   +GI
Sbjct: 193 HHALAACPGQAQGLVPPDCFFEFSSEALCEGSTTGI 228


>01_06_0342 - 28562233-28562610,28562688-28563023
          Length = 237

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +3

Query: 75  RVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPM-EQVPSLCIDGHTLIESLNIMH 251
           RVR+AL +K + Y+     L         +     NP+ E+VP L   G  + ESL ++ 
Sbjct: 23  RVRVALGMKGLSYEYTEEDL-----SSKSDHLLRSNPVHEKVPVLIHGGRPVCESLVVLE 77

Query: 252 Y 254
           Y
Sbjct: 78  Y 78


>01_02_0049 +
           10641363-10641563,10641640-10641750,10641893-10642123,
           10642253-10642357,10642546-10642704
          Length = 268

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +2

Query: 305 RAKVREICEMIASGIQPLQNLIVLIYVGEETKKEWSQHWVTRGFRAIEKL 454
           RA++R++ +M+    +PL+ L   + + ++T  +  + W + GFR I  +
Sbjct: 208 RAQLRKLHKMVERRDKPLKKLQSRLPLKQQTACDKQKLWESSGFRIIASM 257


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,390,769
Number of Sequences: 37544
Number of extensions: 305566
Number of successful extensions: 638
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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