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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0198.Seq
         (797 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0977 + 23227081-23228004,23228244-23228315,23229788-232298...    34   0.15 
09_01_0076 + 1105331-1105453,1106559-1106705,1107046-1107195,110...    30   1.9  
07_03_0775 - 21413522-21413797,21414016-21414178,21414274-214143...    30   2.5  
03_06_0341 - 33261210-33261327,33261411-33262057,33262950-332630...    29   4.3  
03_02_0310 + 7315185-7316820,7318332-7318879                           29   4.3  
11_06_0141 + 20559828-20559986,20560074-20560281,20560375-205604...    29   5.7  
03_02_0762 - 10968888-10969466,10972522-10974175,10974277-109743...    29   5.7  
06_01_1196 + 10289708-10289823,10290828-10291541,10291614-102920...    28   7.5  
08_02_0919 - 22627147-22627326,22627646-22627726,22627827-226281...    28   9.9  
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989...    28   9.9  

>08_02_0977 +
           23227081-23228004,23228244-23228315,23229788-23229841,
           23231763-23231840,23233080-23233173,23233352-23233423,
           23233537-23233584,23233608-23233777,23234016-23234088,
           23234850-23235199
          Length = 644

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 17/59 (28%), Positives = 39/59 (66%)
 Frame = +2

Query: 200 RHQNSISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRL 376
           +++ S ++SR +R + Y++  + E+Q+LKE  +  Q+K+E++ + ++    E Q+N +L
Sbjct: 295 KNRESAARSR-ARKQAYTMELEAEVQKLKEQNMELQKKQEEIMEMQKNFFPEMQKNQKL 352


>09_01_0076 +
           1105331-1105453,1106559-1106705,1107046-1107195,
           1107272-1107531,1107897-1108084,1108187-1108311,
           1108485-1108521,1108802-1108893,1109023-1109133,
           1109242-1109352,1109576-1109669,1109833-1109945,
           1110316-1110411,1110510-1110617,1110665-1110814,
           1110910-1110990,1111205-1111276,1111553-1111646,
           1111759-1111787,1111870-1111967,1112065-1112160,
           1112399-1112620,1113002-1113158,1113472-1113627,
           1113703-1113930
          Length = 1045

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +2

Query: 215 ISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQ 394
           + Q    +I D    ++N++Q LKE    +Q+  E   K +E +HS   +  +L    KQ
Sbjct: 589 VIQDLDLQILDLKKKQENQVQLLKE----KQKSDEAAKKLQEEIHSIKAQKVQLQHKIKQ 644

Query: 395 QLEQ 406
           + EQ
Sbjct: 645 EAEQ 648


>07_03_0775 -
           21413522-21413797,21414016-21414178,21414274-21414351,
           21415983-21416176
          Length = 236

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = +2

Query: 263 QNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVK 415
           ++E Q+LKES    Q+K ++L   K  +  E Q+    L A K+ LEQ++K
Sbjct: 124 RSEAQKLKESNESLQEKIKELKAEKNELRDEKQK----LKAEKESLEQQIK 170


>03_06_0341 -
           33261210-33261327,33261411-33262057,33262950-33263061,
           33263313-33264097,33264797-33264867,33266323-33266635
          Length = 681

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 22/87 (25%), Positives = 46/87 (52%)
 Frame = +2

Query: 164 YGSTIGKIRMGSRHQNSISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEF 343
           YGS   +     RH   + Q ++   +   + +Q   QQ ++ F  QQQ+++   ++++ 
Sbjct: 495 YGSLTRQQLQQLRHHQLLQQQQQQFQQQQQVQQQQ--QQQQQQFQHQQQQQQ--QQFQQ- 549

Query: 344 VHSEYQENTRLLFAHKQQLEQEVKLRQ 424
            H + Q++ +L   H+QQ +Q  +L+Q
Sbjct: 550 QHQQQQQSQQLQQQHQQQ-QQPQQLQQ 575


>03_02_0310 + 7315185-7316820,7318332-7318879
          Length = 727

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -3

Query: 645 CSIACDVTRSSL*SSSPFLQGSTFTTHLRFQCIS 544
           C +AC + R+ +    P L+G   TT ++FQC++
Sbjct: 434 CHVACALERNLI-RPGPTLKGPIGTTEMQFQCLA 466


>11_06_0141 +
           20559828-20559986,20560074-20560281,20560375-20560433,
           20560532-20560590,20560809-20560886,20560974-20561073,
           20561174-20561245,20561327-20561434,20561677-20561730,
           20562847-20563296
          Length = 448

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 260 RQNEIQQLKESFILQQQ---KREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKL 418
           R+N       SF LQ++   ++E   K +E +H++  E T L    K+  E E+KL
Sbjct: 199 RKNAAAAAGFSFRLQERAEKRKEFYQKLEEKIHAKELEQTNLQAKSKESQEAEIKL 254


>03_02_0762 - 10968888-10969466,10972522-10974175,10974277-10974359,
            10974435-10974533,10974620-10974706,10974782-10974838,
            10974939-10975065,10975344-10975465,10975685-10975732,
            10975867-10976268
          Length = 1085

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +2

Query: 194  GSRHQNSISQSRKSRIRDYSLNRQNE-IQQLKESFILQQQKREDLNKYKEFVHSEYQE 364
            GS+H+N   + RK R    S N+ +E  +Q K+  +   Q+ E++ +  E +  ++Q+
Sbjct: 921  GSKHKNIHQKVRKPRAFRISRNQASEKSEQQKQQHVSNNQEYEEIEE-GELIEQDHQD 977


>06_01_1196 +
           10289708-10289823,10290828-10291541,10291614-10292058,
           10292329-10293642
          Length = 862

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 369 LASYLLTSSSWSRKLNYGSWLVVKQMDL 452
           LASYL T  +  R  N GSW++V   D+
Sbjct: 265 LASYLRTELNERRNNNKGSWVIVTTRDV 292


>08_02_0919 -
           22627147-22627326,22627646-22627726,22627827-22628103,
           22629451-22629755,22629835-22629987,22630318-22631076
          Length = 584

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/81 (17%), Positives = 41/81 (50%)
 Frame = +2

Query: 194 GSRHQNSISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTR 373
           G R  ++++  R+ R+   S+    ++QQL+E  +  +++ E+ +  +    +E  + + 
Sbjct: 428 GRRSLDTVNPRRRQRLNGESVA---QLQQLEEQLLELEKEEEEHHMRRMQALNEMDQESE 484

Query: 374 LLFAHKQQLEQEVKLRQLACS 436
            +F H++ +   ++     C+
Sbjct: 485 NVFRHQEYIISTIEFLSKQCN 505


>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
            26699321-26699416
          Length = 1515

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 182  KIRMGSRHQNS-ISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKE 340
            +++M    +++ ++Q  KS   D   N ++E+ QLKE   +Q +    LNK  E
Sbjct: 1093 EVKMAHEEKDATLTQLEKSE--DSIKNLESELAQLKEELSVQMESNSSLNKQLE 1144


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,305,013
Number of Sequences: 37544
Number of extensions: 295522
Number of successful extensions: 712
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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