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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0004.Seq
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0127 - 31872840-31872912,31873021-31873115,31873199-318732...    68   8e-12
12_02_1221 - 27130321-27130491,27130616-27130664,27131120-271311...    64   1e-10
01_06_0072 + 26184592-26184828,26184934-26185107,26185591-261857...    60   2e-09
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993...    58   5e-09
07_03_1371 - 26100553-26101767                                         56   4e-08
08_02_0774 - 21047696-21048889                                         51   1e-06
01_06_1220 + 35493575-35494765                                         49   4e-06
12_02_1094 + 26032135-26032164,26032975-26033152,26033234-260340...    29   2.7  
08_02_0318 + 15710834-15711775                                         29   3.5  
04_03_0175 + 12269091-12269561                                         29   3.5  
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426...    28   8.2  

>03_06_0127 -
           31872840-31872912,31873021-31873115,31873199-31873288,
           31873364-31873399,31874039-31874122,31874223-31874312,
           31874426-31874740,31875674-31875883,31875965-31876036
          Length = 354

 Score = 67.7 bits (158), Expect = 8e-12
 Identities = 35/83 (42%), Positives = 45/83 (54%)
 Frame = +3

Query: 3   IASEVLK*AGXYDPNRXXXXXXXXXXXXXXXXXEXXGVDPTSVAVPVIGGHSGITIIPIL 182
           IA+EV K AG YDP R                 E  G+DP  V VPV+GGH+G+TI+P+L
Sbjct: 168 IAAEVFKKAGTYDPKRLLGVTTLDVARANTFVAEVLGIDPKDVNVPVVGGHAGVTILPLL 227

Query: 183 XQCQPAXKXSDPAKIKAXTERIQ 251
            Q  P    + P +I   T+RIQ
Sbjct: 228 SQVHPPCSFT-PDEISYLTKRIQ 249



 Score = 35.9 bits (79), Expect = 0.031
 Identities = 16/30 (53%), Positives = 23/30 (76%)
 Frame = +1

Query: 289 AGSATLSMAYAGARLTASVLRGLKGESNVV 378
           AGSATLSMA+A A+   + LR ++G++ VV
Sbjct: 262 AGSATLSMAFAAAKFGDACLRAMRGDAGVV 291


>12_02_1221 -
           27130321-27130491,27130616-27130664,27131120-27131188,
           27131845-27131939,27132032-27132121,27132885-27132968,
           27133122-27133211,27133310-27133624,27134184-27134399,
           27134736-27134774,27135337-27135408
          Length = 429

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 35/83 (42%), Positives = 43/83 (51%)
 Frame = +3

Query: 3   IASEVLK*AGXYDPNRXXXXXXXXXXXXXXXXXEXXGVDPTSVAVPVIGGHSGITIIPIL 182
           IA+EV K AG YDP R                 E  G+DP  V VPVIGGH+G+TI+P+L
Sbjct: 183 IAAEVFKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVTILPLL 242

Query: 183 XQCQPAXKXSDPAKIKAXTERIQ 251
            Q  P    +   +I   T RIQ
Sbjct: 243 SQVNPPCSFTS-EEISYLTTRIQ 264


>01_06_0072 +
           26184592-26184828,26184934-26185107,26185591-26185759,
           26185863-26185924,26186506-26186630,26186735-26186852,
           26187760-26187897
          Length = 340

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 47/161 (29%), Positives = 59/161 (36%)
 Frame = +3

Query: 3   IASEVLK*AGXYDPNRXXXXXXXXXXXXXXXXXEXXGVDPTSVAVPVIGGHSGITIIPIL 182
           IA+EV K AG YD  +                     V  T V VPV+GGH+GITI+P+ 
Sbjct: 153 IAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVTDVNVPVVGGHAGITILPLF 212

Query: 183 XQCQPAXKXSDPAKIKAXTERIQELVPXXXXXXXXXXXXXXXHGVRRRAAHGLRAQGXKG 362
            Q  PA        IKA T+R Q+                               +G  G
Sbjct: 213 SQATPATNALSDEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFANACLKGLNG 272

Query: 363 RVQXXXXXXXXXXXXXXXXXXAXPVVLGKNGLQKVLGYGTL 485
            V                   A  V LGKNG+++VLG G L
Sbjct: 273 -VPDVVECSFVQSTVTELPFFASKVKLGKNGVEEVLGLGQL 312



 Score = 36.3 bits (80), Expect = 0.023
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = +1

Query: 292 GSATLSMAYAGARLTASVLRGLKGESNVV 378
           GSATLSMAYAGA    + L+GL G  +VV
Sbjct: 249 GSATLSMAYAGAVFANACLKGLNGVPDVV 277


>05_07_0204 -
           28397597-28397737,28398225-28398342,28399215-28399339,
           28399683-28399744,28399867-28400035,28400594-28400767,
           28400856-28401089
          Length = 340

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 47/161 (29%), Positives = 59/161 (36%)
 Frame = +3

Query: 3   IASEVLK*AGXYDPNRXXXXXXXXXXXXXXXXXEXXGVDPTSVAVPVIGGHSGITIIPIL 182
           IA+EV K AG YD  +                     V  T V VPV+GGH+GITI+P+ 
Sbjct: 152 IAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVTEVNVPVVGGHAGITILPLF 211

Query: 183 XQCQPAXKXSDPAKIKAXTERIQELVPXXXXXXXXXXXXXXXHGVRRRAAHGLRAQGXKG 362
            Q  PA        IKA T+R Q+                               +G  G
Sbjct: 212 SQATPASNALSHEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLKGLNG 271

Query: 363 RVQXXXXXXXXXXXXXXXXXXAXPVVLGKNGLQKVLGYGTL 485
            V                   A  V LGKNG+++VLG G L
Sbjct: 272 -VPDVVECSFVQSTVTELPFFASKVRLGKNGVEEVLGLGQL 311



 Score = 36.3 bits (80), Expect = 0.023
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = +1

Query: 292 GSATLSMAYAGARLTASVLRGLKGESNVV 378
           GSATLSMAYAGA    + L+GL G  +VV
Sbjct: 248 GSATLSMAYAGAVFADACLKGLNGVPDVV 276


>07_03_1371 - 26100553-26101767
          Length = 404

 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 30/83 (36%), Positives = 43/83 (51%)
 Frame = +3

Query: 3   IASEVLK*AGXYDPNRXXXXXXXXXXXXXXXXXEXXGVDPTSVAVPVIGGHSGITIIPIL 182
           IA+EVLK  G YDP +                 E  G+    V VPV+GGH+  TI+P+L
Sbjct: 203 IAAEVLKRKGVYDPRKLFGVTTLDVVRANTFVAEMKGLPLADVDVPVVGGHAAATILPLL 262

Query: 183 XQCQPAXKXSDPAKIKAXTERIQ 251
            + +P    +D  +++A T RIQ
Sbjct: 263 SKARPKTAFTD-EEVEALTRRIQ 284



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 24/53 (45%), Positives = 29/53 (54%)
 Frame = +1

Query: 292 GSATLSMAYAGARLTASVLRGLKGESNVVRLPVGQIXAXGXHVVPPXPLCSAR 450
           GSATLSMAYA AR   + LRGL G+++V      Q  A     VP  P  + R
Sbjct: 300 GSATLSMAYAAARFLEASLRGLDGDADVYECSYVQCQA-----VPELPFFACR 347


>08_02_0774 - 21047696-21048889
          Length = 397

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 28/83 (33%), Positives = 43/83 (51%)
 Frame = +3

Query: 3   IASEVLK*AGXYDPNRXXXXXXXXXXXXXXXXXEXXGVDPTSVAVPVIGGHSGITIIPIL 182
           IA+EVLK  G Y+P +                 +   +    V VPV+GGH+GITI+P+L
Sbjct: 201 IAAEVLKQKGVYNPKKLFGVTTLDVVRANTFVAQKKNLKLIDVDVPVVGGHAGITILPLL 260

Query: 183 XQCQPAXKXSDPAKIKAXTERIQ 251
            +  P+   +D  + +  T+RIQ
Sbjct: 261 SKTMPSVTFTD-EETEQLTKRIQ 282



 Score = 38.3 bits (85), Expect = 0.006
 Identities = 19/29 (65%), Positives = 21/29 (72%)
 Frame = +1

Query: 289 AGSATLSMAYAGARLTASVLRGLKGESNV 375
           AGSATLSMAYA AR   S LR L G+ +V
Sbjct: 295 AGSATLSMAYAAARFVESSLRALAGDPDV 323


>01_06_1220 + 35493575-35494765
          Length = 396

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 27/83 (32%), Positives = 43/83 (51%)
 Frame = +3

Query: 3   IASEVLK*AGXYDPNRXXXXXXXXXXXXXXXXXEXXGVDPTSVAVPVIGGHSGITIIPIL 182
           IA+EVLK  G Y+P +                 +   +    V VPV+GGH+GITI+P+L
Sbjct: 201 IAAEVLKQKGVYNPKKLFGVTTLDVVRANTFIAQKKNLKLIDVDVPVVGGHAGITILPLL 260

Query: 183 XQCQPAXKXSDPAKIKAXTERIQ 251
            + +P+   ++  + +  T RIQ
Sbjct: 261 SKTRPSVTFTN-EETEELTRRIQ 282



 Score = 38.3 bits (85), Expect = 0.006
 Identities = 19/29 (65%), Positives = 21/29 (72%)
 Frame = +1

Query: 289 AGSATLSMAYAGARLTASVLRGLKGESNV 375
           AGSATLSMAYA AR   S LR L G+ +V
Sbjct: 295 AGSATLSMAYAAARFVESSLRALAGDPDV 323


>12_02_1094 +
           26032135-26032164,26032975-26033152,26033234-26034017,
           26034135-26034216,26034968-26035177
          Length = 427

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 476 RDPSTNXXAASPEXGPRPTXQEHSRPGQAXAKK 574
           +D       ASPE  PRP  + HS  G   AKK
Sbjct: 278 KDDDDELPRASPEKRPRPRPRPHSGDGGGEAKK 310


>08_02_0318 + 15710834-15711775
          Length = 313

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
 Frame = +1

Query: 280 GRXAGSATLSMAYAGARLTASVLRGLKGESNVVRLPV--GQIXAXGXHVVP--PXPLCSA 447
           GR      L  +  GARL  ++  GL   + V+RLP     + +   HVVP    PL + 
Sbjct: 58  GRLRRMLDLGPSVRGARLLLAIFAGLLAAAEVIRLPFFSRAVVSPPRHVVPCLAYPLVAH 117

Query: 448 RTASRRFXGT 477
             A   F  T
Sbjct: 118 GVAEPCFLAT 127


>04_03_0175 + 12269091-12269561
          Length = 156

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -3

Query: 528 GRGPXSGLAASXFVEGSRTXEPSGGRSCRAQ 436
           G G   GL A  F EGS T    GGR   A+
Sbjct: 20  GGGVGGGLGAESFAEGSGTCTGGGGRGAAAE 50


>03_06_0704 +
           35641774-35642031,35642122-35642446,35642546-35642699,
           35643662-35643706,35644121-35644180,35644532-35644694,
           35645356-35645717,35645985-35646303
          Length = 561

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 443 RQERPPEGSXVRDPSTNXXAASPEXGPRPTXQEHSRP 553
           R  +PP     RDP  +    + +  P+P+  +H  P
Sbjct: 105 RDRKPPPPPTHRDPKPSLPPTTTQRDPKPSPPQHKAP 141


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,078,676
Number of Sequences: 37544
Number of extensions: 214666
Number of successful extensions: 656
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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