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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0037
         (693 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_1053 - 22575281-22575409,22575516-22575653,22575786-225758...    32   0.50 
03_02_0179 - 6201393-6202365,6202470-6202610,6202728-6202767,620...    31   0.87 
03_02_0023 + 5065962-5066079,5066179-5067614                           31   0.87 
12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387     31   1.1  
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821...    31   1.1  
09_02_0311 + 7164774-7166327                                           30   2.0  
04_04_1600 + 34704527-34704758,34705393-34706777                       30   2.0  
09_02_0430 - 9313768-9314259,9314347-9315299,9316875-9317022           29   2.6  
10_06_0088 - 10538037-10539463,10539696-10539789                       29   3.5  
04_04_0078 + 22573413-22573554,22573637-22573959,22574681-225753...    29   3.5  
11_06_0495 - 24319531-24320831,24320923-24321109,24322919-243230...    29   4.6  
04_04_0345 - 24542869-24543540,24543725-24543805,24543845-245439...    29   4.6  
04_04_0077 + 22568757-22568895,22568999-22569954,22570021-22570488     29   4.6  
04_04_1601 + 34707975-34708209,34708598-34709970                       28   6.1  
12_02_0509 - 19829360-19830400,19831475-19831821,19831920-19832073     28   8.1  
07_03_0968 - 23027940-23028149,23028800-23029002,23029610-230301...    28   8.1  
06_03_0418 + 20581420-20583207,20583243-20583254                       28   8.1  
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557...    28   8.1  

>10_08_1053 -
           22575281-22575409,22575516-22575653,22575786-22575884,
           22576281-22576361,22577171-22577233,22577473-22577520,
           22577622-22577990,22578082-22578183,22578290-22578414,
           22578500-22578566,22578817-22578895,22578928-22579079,
           22579182-22579223
          Length = 497

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 21/102 (20%), Positives = 49/102 (48%)
 Frame = +1

Query: 298 SIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQAVQNVS 477
           S+++G +++    ++VL+VDR+GR+P           ++G I    +   +    +++  
Sbjct: 342 SVLLGLLKLIMTGVAVLVVDRLGRRP------LLIGGVSG-IAVSLFLLSSYYTLLKDAP 394

Query: 478 WILLVALIVYTCATPSAY*PCRMLQSGRCFPTNVKLYAFCIA 603
           ++ ++AL++Y      ++ P   L     FP  ++     IA
Sbjct: 395 YVAVIALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSIA 436


>03_02_0179 -
           6201393-6202365,6202470-6202610,6202728-6202767,
           6204390-6204791,6205567-6205696
          Length = 561

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 6/138 (4%)
 Frame = +1

Query: 298 SIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQAVQNVS 477
           ++I G V V + ++SV  VDRVGR+                I        T++       
Sbjct: 367 AVITGAVNVLSTLVSVYSVDRVGRRMLLLEAGVQMFLSQVAIAVVLGIKVTDRSDNLGHG 426

Query: 478 WILLVALIVYTCATPSA--Y*PCRMLQSGRCFPTNVK----LYAFCIAHIYTGVAMVCSA 639
           W ++V ++V T  +  A  + P   L     FP   +        C+  ++T V      
Sbjct: 427 WAIMVVVMVCTFVSSFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFL 486

Query: 640 ESLPGFRTSVLKFYTVFL 693
             L   + ++  F++ ++
Sbjct: 487 SMLCHLKYAIFAFFSAWV 504


>03_02_0023 + 5065962-5066079,5066179-5067614
          Length = 517

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 1/121 (0%)
 Frame = +1

Query: 298 SIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQA-VQNV 474
           S+ +G  +     ++ LL+DRVGR+P              T+ T     D   +   + +
Sbjct: 327 SMAVGVCKTFFIPIATLLLDRVGRRPLLLASGGGMAIFLFTLATSLLMMDRRPEGEAKAL 386

Query: 475 SWILLVALIVYTCATPSAY*PCRMLQSGRCFPTNVKLYAFCIAHIYTGVAMVCSAESLPG 654
             I + A++ +  +  S   P   + +   +P  ++  A   A I TG+  + S  +   
Sbjct: 387 GAISIAAMLSFVASFASGLGPVAWVYTSEIYPVRLRAQA---AAIGTGLNRLMSGATTMS 443

Query: 655 F 657
           F
Sbjct: 444 F 444


>12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387
          Length = 487

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/95 (15%), Positives = 38/95 (40%)
 Frame = +1

Query: 298 SIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQAVQNVS 477
           +++ G  + ++ ++++ L DRVGR+P               +G+ F  +   +      +
Sbjct: 322 NVVFGVAKASSILVAMALTDRVGRRPLLLASTGGMTASLLALGSVFAAFGGARDDAAVAA 381

Query: 478 WILLVALIVYTCATPSAY*PCRMLQSGRCFPTNVK 582
              +  ++ + CA      P   + S    P  ++
Sbjct: 382 GAAVAVVVAFVCAFSVGIGPLAWVYSSEILPLRLR 416


>11_06_0528 -
           24681630-24681751,24681911-24682025,24682134-24682193,
           24682454-24682513,24682606-24682668,24682752-24682798,
           24682884-24683049,24683136-24683228,24683306-24683370,
           24683462-24683537,24683644-24683709,24684114-24684203,
           24684359-24684421,24684548-24684670
          Length = 402

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +1

Query: 298 SIIIGCVQVATCILSVLLVDRVGRKP 375
           +I++GC+Q     +  LL+DR GR+P
Sbjct: 256 TILMGCIQAPITAVGALLMDRSGRRP 281


>09_02_0311 + 7164774-7166327
          Length = 517

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +1

Query: 298 SIIIGCVQVATCILSVLLVDRVGRK 372
           ++I G V +A  ++SVL VDRVGR+
Sbjct: 325 AVITGGVNMAATLVSVLAVDRVGRR 349


>04_04_1600 + 34704527-34704758,34705393-34706777
          Length = 538

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +1

Query: 298 SIIIGCVQVATCILSVLLVDRVGRKP 375
           ++ +G  + A   L+++L+DRVGRKP
Sbjct: 350 TVAVGFFKTAFIALAIVLIDRVGRKP 375


>09_02_0430 - 9313768-9314259,9314347-9315299,9316875-9317022
          Length = 530

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 25/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)
 Frame = +1

Query: 298 SIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYF-YDTNKQAVQNV 474
           SII G + V   ++S+++VDR+GR+                +       +   ++  + V
Sbjct: 329 SIITGSMLVVGALVSMVVVDRLGRRFLFIEAGIQMISSMVVVAVILALKFGHGEELSKGV 388

Query: 475 SWILLVALIVYTCATPSAY*PCRMLQSGRCFPTNVK----LYAFCIAHIYTGVAMVCSAE 642
             +L+VA+ ++  A   ++ P   L     FP  ++        C+   +T     C   
Sbjct: 389 GTVLVVAICLFVVAYGWSWGPLGWLVPSELFPLEMRSAGQSVVVCVNLFWTAAVAQCFLA 448

Query: 643 SLPGFRTSVLKFYTVFL 693
           ++   R  V   +   +
Sbjct: 449 AMCHLRWGVFILFAALI 465


>10_06_0088 - 10538037-10539463,10539696-10539789
          Length = 506

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +1

Query: 298 SIIIGCVQVATCILSVLLVDRVGRKP 375
           +I +G  + A  + ++LLVDR+GR+P
Sbjct: 311 TIGVGVTKTAFILTAILLVDRIGRRP 336



 Score = 28.3 bits (60), Expect = 6.1
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +2

Query: 89  RGSWSDLFTEATN--KKAMWITLGVFTVQQFCGSAAVVAYSQFIF 217
           +G W +LF   T   ++ +   LG+   Q   G  AVV YS  IF
Sbjct: 252 KGVWRELFLHPTPPVRRIVIAALGIHFFQHLTGIEAVVLYSPRIF 296


>04_04_0078 +
           22573413-22573554,22573637-22573959,22574681-22575313,
           22575383-22575838
          Length = 517

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 298 SIIIGCVQVATCILSVLLVDRVGRK 372
           ++I+G V +   +LS L++DR GRK
Sbjct: 328 NVILGAVNLVCLMLSTLVIDRYGRK 352


>11_06_0495 -
           24319531-24320831,24320923-24321109,24322919-24323062,
           24324467-24324469
          Length = 544

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +1

Query: 298 SIIIGCVQVATCILSVLLVDRVGRKP 375
           ++ +G V+  + +++ LL DRVGR+P
Sbjct: 382 TVAVGVVKTCSILVATLLSDRVGRRP 407


>04_04_0345 -
           24542869-24543540,24543725-24543805,24543845-24543910,
           24543991-24544098,24545101-24545436,24545516-24545586,
           24546105-24546252
          Length = 493

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 68  VQEDMKNRGSWSDLFTEATNKKAMWITLGVFTVQQFCGSAAVVAYSQFI 214
           ++E+    GS+ D+F     + A +   G+   QQF G   V+ YS  I
Sbjct: 240 LEEESDGTGSYLDIFKSKELRLAFFAGAGLQAFQQFTGINTVMYYSPTI 288


>04_04_0077 + 22568757-22568895,22568999-22569954,22570021-22570488
          Length = 520

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +1

Query: 298 SIIIGCVQVATCILSVLLVDRVGRK 372
           ++I+  V+ A+ ILS L++DR GRK
Sbjct: 327 AVILAGVKFASLILSTLVIDRYGRK 351


>04_04_1601 + 34707975-34708209,34708598-34709970
          Length = 535

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 307 IGCVQVATCILSVLLVDRVGRKP 375
           +G  +    +++++LVDRVGRKP
Sbjct: 352 VGLSKTVFIVIAIVLVDRVGRKP 374


>12_02_0509 - 19829360-19830400,19831475-19831821,19831920-19832073
          Length = 513

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 8/26 (30%), Positives = 19/26 (73%)
 Frame = +1

Query: 298 SIIIGCVQVATCILSVLLVDRVGRKP 375
           ++++G  + A+ ++ + L DR+GR+P
Sbjct: 338 TVLLGATKTASIVVPLFLADRLGRRP 363


>07_03_0968 -
           23027940-23028149,23028800-23029002,23029610-23030138,
           23030342-23030579,23031121-23031168,23031199-23031494
          Length = 507

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 274 KSIEPYQESIIIGCVQVATCILSVLLVDRVGRK 372
           K    Y++ ++    +    +L+ LLVDR+GRK
Sbjct: 356 KDANLYRDVLVTSLAEFPGLVLAALLVDRIGRK 388


>06_03_0418 + 20581420-20583207,20583243-20583254
          Length = 599

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +3

Query: 576 CQAVRVLHSTHLYRRRYGLQCRISSGFSNKRIKILHSV 689
           C     +HS+ +YR R GL C++++  S + ++ +  V
Sbjct: 337 CSCPSEIHSSPIYRDRPGLGCKLATPISCRDVRGIEMV 374


>03_05_0434 +
           24252994-24253449,24254791-24254877,24255450-24255748,
           24256146-24256383,24256907-24257441,24257527-24257729,
           24258311-24258520
          Length = 675

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 274 KSIEPYQESIIIGCVQVATCILSVLLVDRVGRK 372
           K +  Y+++ I    +V   ILS +LVD  GRK
Sbjct: 524 KDVNLYKDTFITSLAEVPGLILSAVLVDWFGRK 556


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,283,690
Number of Sequences: 37544
Number of extensions: 400322
Number of successful extensions: 1015
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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