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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C09f
         (315 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798     33   0.047
07_03_0572 - 19604643-19604745,19604947-19605629,19605786-196062...    28   1.3  
07_01_0591 + 4400011-4400106,4400508-4400648,4400987-4401202           26   7.1  
06_03_0389 - 20273637-20274383,20274488-20274979                       26   7.1  
06_03_0387 - 20244279-20245025,20245130-20245621                       26   7.1  
01_06_0504 + 29867795-29868138,29868994-29869294,29869391-298700...    26   7.1  
01_01_0179 + 1517379-1517721,1518092-1518376,1519462-1519699,151...    26   7.1  
07_03_0478 + 18556773-18556883,18557219-18557318,18557807-185595...    25   9.4  
04_04_0194 - 23485978-23486833,23486933-23487062,23487154-23487286     25   9.4  
02_02_0457 + 10503801-10507358                                         25   9.4  

>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
          Length = 268

 Score = 33.1 bits (72), Expect = 0.047
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 193 STASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFXEL 315
           S  S + I VE       V ++ +NRPKALNAL +P+   L
Sbjct: 5   SPDSGDLILVEPAKPGSRVAVVTINRPKALNALTRPMMVSL 45


>07_03_0572 -
           19604643-19604745,19604947-19605629,19605786-19606284,
           19606370-19606878,19607110-19607148,19607347-19607411,
           19609081-19609201,19610229-19610315,19611096-19611179,
           19611925-19612175,19612869-19612962,19613043-19613284,
           19614187-19614505
          Length = 1031

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 142 NKCKVVSATSQASIKFYSTASYENIKVEVVGSKKNVGLI-QLNRPKALNALCKPLFXE 312
           NK K+ SA    +  FY + +   +   ++      GL  Q N+PKAL + CK  F E
Sbjct: 236 NKSKIFSANPNKTCNFYRSWAPNTLNERMLSLV--FGLTNQSNKPKALKSSCKFEFLE 291


>07_01_0591 + 4400011-4400106,4400508-4400648,4400987-4401202
          Length = 150

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 152 LHLFSTFFPSKARVTVATEAILRN 81
           +HL S FF +  R TV+   ++RN
Sbjct: 78  VHLISMFFNTHVRATVSLSGMMRN 101


>06_03_0389 - 20273637-20274383,20274488-20274979
          Length = 412

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 106 TVTRALLGKNVLNKCKVVSATSQASIKFYSTASYENIKVEVVGS 237
           TV   +L K+  N  ++ S    AS+   S  +YENIK+E V +
Sbjct: 278 TVKNCVLKKST-NGVRIKSYEDAASVLTASKFTYENIKMEDVAN 320


>06_03_0387 - 20244279-20245025,20245130-20245621
          Length = 412

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 106 TVTRALLGKNVLNKCKVVSATSQASIKFYSTASYENIKVEVVGS 237
           TV   +L K+  N  ++ S    AS+   S  +YENIK+E V +
Sbjct: 278 TVKNCVLKKST-NGVRIKSYEDAASVLTASKFTYENIKMEDVAN 320


>01_06_0504 +
           29867795-29868138,29868994-29869294,29869391-29870078,
           29870192-29870421
          Length = 520

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 108 CNSCFAGKECTEQV 149
           CNSCF+G +C+ ++
Sbjct: 93  CNSCFSGPDCSVRI 106


>01_01_0179 +
           1517379-1517721,1518092-1518376,1519462-1519699,
           1519796-1519946,1520049-1520446,1520552-1520573
          Length = 478

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 261 LNESDILLGADHLNLDVLV*CCAIKLYRCL 172
           LNE  +LL   H NL  L+ CCA   ++ L
Sbjct: 165 LNEVRLLLKVQHRNLVSLLGCCASSGHKML 194


>07_03_0478 +
           18556773-18556883,18557219-18557318,18557807-18559513,
           18559709-18560094,18560175-18560246,18560366-18560455
          Length = 821

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 188 NFIDAWLVADTTLHLFSTFFPSKARVTVATE 96
           ++ D WL+ DT++ +F   + S  +V +  E
Sbjct: 514 DYFDGWLMPDTSVKMFVEQYESAVKVKLEKE 544


>04_04_0194 - 23485978-23486833,23486933-23487062,23487154-23487286
          Length = 372

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 122 CWERMY*TSAKWYPQQAKHL*SFIAQHHTRTSRL 223
           C E+      +W P++   L S+I Q+ TR  RL
Sbjct: 6   CCEKDNVKRGQWTPEEDNKLLSYITQYGTRNWRL 39


>02_02_0457 + 10503801-10507358
          Length = 1185

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 173  WLVADTTLHLFSTFFPSKARVTVATEAILRNMNHQVL 63
            W V    LH++S+ FP+  ++ +A   I       VL
Sbjct: 960  WHVTSIPLHVWSSSFPALQKLQIADSGITGESQSSVL 996


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,349,098
Number of Sequences: 37544
Number of extensions: 148673
Number of successful extensions: 340
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 386885760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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