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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30013
         (509 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310...    99   2e-21
06_02_0283 + 13726047-13726090,13726160-13726266,13726515-137266...    82   2e-16
05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141...    80   9e-16
05_01_0464 - 3670397-3670525,3671152-3671244,3671366-3671537,367...    75   3e-14
06_01_0023 + 227014-227166,227893-228001,228096-228157,228284-22...    46   2e-05
11_06_0340 - 22500411-22500566,22500660-22500783,22500914-225010...    44   7e-05
07_03_1669 + 28499143-28499409,28499915-28500055,28500528-285006...    41   5e-04
06_02_0320 - 14347195-14347443,14347573-14347674,14347747-143478...    39   0.002
08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-24...    31   0.54 
06_02_0285 + 13789900-13790071,13790407-13790525,13790642-137907...    31   0.71 
06_01_0387 - 2770387-2770514,2770963-2771063,2771152-2771255,277...    30   0.94 
08_02_0358 + 16176373-16176534,16176628-16176739,16176967-161771...    27   6.6  
02_04_0625 - 24547435-24547569,24547674-24547742,24547871-245479...    27   6.6  
11_06_0718 - 26592786-26593856,26597401-26597451,26597977-265984...    27   8.8  
06_03_1056 + 27239176-27242361                                         27   8.8  
02_01_0302 - 2021221-2023305                                           27   8.8  

>01_01_0413 -
           3107668-3107796,3107879-3107971,3108082-3108253,
           3108341-3108417,3108514-3108673,3108766-3108875,
           3109384-3109443,3109545-3109618,3109748-3109871,
           3110795-3110872,3111169-3111275,3112572-3112673,
           3112800-3112815
          Length = 433

 Score = 98.7 bits (235), Expect = 2e-21
 Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   GCAGVSYVTYGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGEL 181
           GC G+S     +   E+  VD+S  + + V SSLAM +I + G+E QKQKYLP +A    
Sbjct: 104 GCPGLSITASAITMAEIARVDASCSTFILVHSSLAMVTIALCGSEVQKQKYLPSLAQLTA 163

Query: 182 IGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKD-DAGK 358
           +GC+ LTEPN GSDA  L+T A        + + G K WI N+  AD+++V A++ +  +
Sbjct: 164 VGCWALTEPNHGSDASSLITTATKVPGG--WHIDGQKRWIGNSTFADVLVVLARNANTKQ 221

Query: 359 VRGFIVR 379
           + GFIVR
Sbjct: 222 LNGFIVR 228


>06_02_0283 +
           13726047-13726090,13726160-13726266,13726515-13726621,
           13726735-13726812,13734948-13735071,13735585-13735658,
           13735742-13735801,13737561-13737670,13737806-13737965,
           13738218-13738360,13738461-13738605,13738727-13738819,
           13740070-13740186
          Length = 453

 Score = 82.2 bits (194), Expect = 2e-16
 Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
 Frame = +2

Query: 2   GCAGVSYVTYGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGEL 181
           GC G+S     +   E+  VD+S  S   VQS LAM SI   G+E QK+KYL  ++  + 
Sbjct: 115 GCPGLSGPACAMCFLEIARVDASIASFCLVQSCLAMVSIAQLGSEAQKEKYLRPLSKMQK 174

Query: 182 IGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWA-KDDAGK 358
           +  + L+EPN GSDA  L T A+       ++L+G K W  N+  ADI +V A      +
Sbjct: 175 VCVYALSEPNHGSDASSLNTTARKVPGG--WILNGQKRWPANSSFADIFVVLACNTSTNQ 232

Query: 359 VRGFIV 376
           + GFIV
Sbjct: 233 INGFIV 238



 Score = 30.3 bits (65), Expect = 0.94
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 399 GLDTPKINGKFXLRAXXTGMILLDEVXIPEENLLP 503
           GL   KI+ K  LR      ILL++V +P+++ LP
Sbjct: 244 GLKISKIDNKMSLRVVQNCDILLEDVFVPDDDRLP 278


>05_01_0195 -
           1409820-1409966,1410304-1410360,1410774-1410828,
           1410902-1411002,1411051-1411205,1411395-1411459,
           1411545-1411595,1411817-1411893,1412153-1412262,
           1412355-1412403,1412528-1412572,1412689-1412813,
           1413087-1413228,1413336-1413446
          Length = 429

 Score = 80.2 bits (189), Expect = 9e-16
 Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
 Frame = +2

Query: 2   GCAGVSYVTYGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGEL 181
           G  G+ Y+ + +   E+     S   +    S+L +  +  +G+  QK KYLP++ +GE 
Sbjct: 88  GGMGLGYMYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKLKYLPKLISGEH 147

Query: 182 IGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKDD--AG 355
           +G   ++EPN GSD   +  + K +  +  YV++G+K W TN P A  ++V+AK D  AG
Sbjct: 148 VGALAMSEPNSGSDVVSM--KCKAEKVDGGYVINGNKMWCTNGPSAQTLVVYAKTDIAAG 205

Query: 356 K--VRGFIVRTSRGKERFRYAQNQWEIXFAG 442
              +  FI+   +G   F  AQ   ++   G
Sbjct: 206 SKGITAFII--EKGMPGFSTAQKLDKLGMRG 234


>05_01_0464 -
           3670397-3670525,3671152-3671244,3671366-3671537,
           3671626-3671702,3671819-3671978,3672104-3672213,
           3672321-3672380,3672492-3672629,3672922-3672999,
           3673227-3673333,3674506-3674598,3674708-3674723
          Length = 410

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
 Frame = +2

Query: 62  DSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLVT 241
           D+ + S++ +    ++  I + G+E QKQKYLP +     IGC+ LTEP++GSDA  L T
Sbjct: 102 DNYFLSSLFLSFQFSV-QIALCGSEAQKQKYLPSLTQFRTIGCWALTEPDYGSDASSLRT 160

Query: 242 RAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKD-DAGKVRGFIVR 379
            A        + L G K WI N   AD++I+ A++ D  ++ GFIV+
Sbjct: 161 AATKVPGG--WHLDGQKRWIGNGTFADVLIILARNSDTNQLNGFIVK 205


>06_01_0023 +
           227014-227166,227893-228001,228096-228157,228284-228493,
           228609-228696,228774-228936,229037-229235,229456-229653,
           229887-230018,230182-230302,230453-230563,230710-230779,
           230880-231063,231137-231346
          Length = 669

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
 Frame = +2

Query: 128 GTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYV-----LSGSK 292
           GTE+Q++K+LP     ++IGC+  TE   GS+  GL T A  D K   +V     L+ SK
Sbjct: 119 GTEEQQKKWLPLAYRFQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSK 178

Query: 293 TW-------ITNAPIADIIIVWAKDDAGKVRGFIVR 379
            W        T+A +   +I   KD    + GFIV+
Sbjct: 179 WWPGGLGKASTHAVVYARLITEGKDYG--IHGFIVQ 212


>11_06_0340 -
           22500411-22500566,22500660-22500783,22500914-22501080,
           22501157-22501336,22501544-22502427,22502728-22502843,
           22503745-22504217
          Length = 699

 Score = 44.0 bits (99), Expect = 7e-05
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
 Frame = +2

Query: 29  YGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEP 208
           Y  +     G D S    + VQ SL  GSI   GT+  + ++   +   +  GCF +TE 
Sbjct: 135 YFAVMEAAGGADISLGVKLGVQYSLWGGSIINLGTKKHRDRFFDGIDNLDYPGCFAMTEL 194

Query: 209 NFGSDAGGLVTRAKHDAKNKCYVLS-----GSKTWITNAPI 316
           + GS+   L T A  D     ++++       K WI NA +
Sbjct: 195 HHGSNVQALQTTATFDPVTDEFIINTPNDGAIKWWIGNAAL 235


>07_03_1669 +
           28499143-28499409,28499915-28500055,28500528-28500659,
           28501185-28501373,28501503-28501580,28502267-28502386,
           28502701-28502818,28503012-28503280,28503428-28503622,
           28503737-28503879,28504096-28504180,28504270-28504479,
           28504559-28504711,28504862-28504966,28505044-28505235
          Length = 798

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
 Frame = +2

Query: 107 MGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNF-GSDAGGLVTRAKHDAKNKCYVLS 283
           M  +  YGT++Q++++L  +  G++   F +TEP    SDA  +        +   YV++
Sbjct: 502 MEVLLRYGTKEQQKQWLVPLLEGKIRSGFAMTEPQVASSDATNI--ECSISRQGDFYVIN 559

Query: 284 GSKTWITNA--PIADIIIVWAKDD 349
           G+K W + A  P   I+++  K D
Sbjct: 560 GTKWWTSGAMDPRCQILVLMGKTD 583


>06_02_0320 -
           14347195-14347443,14347573-14347674,14347747-14347851,
           14347938-14348084,14348171-14348290,14348743-14348878,
           14349198-14349328,14350854-14350928,14351040-14351139,
           14351213-14351385,14351474-14351581,14351674-14351791,
           14353477-14353970
          Length = 685

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
 Frame = +2

Query: 62  DSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLVT 241
           D S    + V   L   +I   GT+    K+L       + GCF +TE   GS+  G+ T
Sbjct: 151 DHSLAIKIGVHFFLWGSAIKFLGTKRHHDKWLSDTENYVIKGCFSMTELGHGSNVRGIET 210

Query: 242 RAKHDAKNKCYVL-----SGSKTWITNA 310
            A +D K + +V+     S  K WI  A
Sbjct: 211 VATYDIKTREFVINTPCESAQKYWIGGA 238


>08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-246796,
            246893-247240,247882-248721,248786-248832,249470-249596,
            249672-249836,249973-251370,251453-251713,251802-252161
          Length = 1539

 Score = 31.1 bits (67), Expect = 0.54
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -3

Query: 222  SLPKLGSVNPKQPINSPVAMRGKY 151
            SLP   S++P+  +N  VA+RGKY
Sbjct: 1213 SLPLFSSIHPEVAVNGKVALRGKY 1236


>06_02_0285 +
           13789900-13790071,13790407-13790525,13790642-13790751,
           13790887-13791046,13791407-13791483,13792299-13792470,
           13792580-13792672,13793617-13793733
          Length = 339

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 272 YVLSGSKTWITNAPIADIIIVWAKDDA-GKVRGFIV 376
           ++L+G K W  N   AD+ +V A + +  ++ GFIV
Sbjct: 102 WILNGQKRWPANGSFADVFVVLACNTSNNQINGFIV 137



 Score = 29.1 bits (62), Expect = 2.2
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 399 GLDTPKINGKFXLRAXXTGMILLDEVXIPEENLLP 503
           GL   KI  K  LR      ILL++V +P+++ LP
Sbjct: 143 GLKISKIENKTSLRVVQNCDILLEDVFVPDDDRLP 177


>06_01_0387 -
           2770387-2770514,2770963-2771063,2771152-2771255,
           2771345-2771507,2771550-2771596,2772818-2772946
          Length = 223

 Score = 30.3 bits (65), Expect = 0.94
 Identities = 20/76 (26%), Positives = 30/76 (39%)
 Frame = +2

Query: 59  VDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLV 238
           VDS     M  + S+  GS+Y YG  D+  +Y+  +     +    + +  F   A G  
Sbjct: 120 VDSEGARLMGSRFSVGSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGC 179

Query: 239 TRAKHDAKNKCYVLSG 286
               H   N    LSG
Sbjct: 180 VSVYHVGPNGWTKLSG 195


>08_02_0358 +
           16176373-16176534,16176628-16176739,16176967-16177151,
           16177325-16177330
          Length = 154

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -2

Query: 175 TCSHAW*VFLFLVFSSVHINRTHCQTTLHTHR*SIRGVNAI*FSCNET 32
           T SH   +FLFL   +V +  T+ +T++H H  S+     + F+C  T
Sbjct: 3   TPSHCL-IFLFLCLPAVLVRLTYLETSIHVHA-SVPRRMGLAFTCTCT 48


>02_04_0625 - 24547435-24547569,24547674-24547742,24547871-24547997,
            24548086-24548209,24548714-24548832,24548953-24549044,
            24549124-24549329,24549429-24549534,24549636-24549740,
            24549836-24549942,24550030-24550253,24550341-24550468,
            24550945-24551022,24551338-24552012,24552655-24552798,
            24552985-24553064,24553958-24554029,24554124-24554343,
            24554460-24554590,24555118-24555243,24555567-24555695,
            24556156-24556318,24556408-24556545,24557198-24557317,
            24557521-24557682,24557751-24557876,24558172-24558342,
            24558435-24558590,24559061-24559408
          Length = 1526

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
 Frame = +2

Query: 29   YGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEP 208
            YGL+    DGV   ++ A +      +G   +        K +P+  TG  I  F  T  
Sbjct: 970  YGLVLELSDGVRGMHKFAENGHKDFEVGEELLVKCSSFNAKGIPKYRTGRKIVAFSATRS 1029

Query: 209  N----FGSDAGGLVTRAKHDAKNKCYVLSGSK 292
            +     GS+A     R + + KN+  + S S+
Sbjct: 1030 HNDEACGSEAAS-DNRQEMNQKNEPKMRSSSR 1060


>11_06_0718 -
           26592786-26593856,26597401-26597451,26597977-26598423,
           26599748-26599815,26599965-26600052
          Length = 574

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 341 KDDAGKVRGFIVRTSRGKERFRYAQNQWE 427
           K++  K  GFI+  S G ++F+Y++  WE
Sbjct: 225 KEEKKKRVGFILLLSDGVDQFQYSRINWE 253


>06_03_1056 + 27239176-27242361
          Length = 1061

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 194 QNNQLIHL*PCVVSISVSGLQFRTYKSNPLPNYS 93
           ++  LI++  C  SI + G +FR    + +PNYS
Sbjct: 789 KHRNLINIVTCCSSIDMEGNEFRALVFDFMPNYS 822


>02_01_0302 - 2021221-2023305
          Length = 694

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = -3

Query: 258 ASCFALVTNP-PASLPKLGSVNPKQPINSPVAMRGKY 151
           A C A    P P   P  G   P  P++SP   RG Y
Sbjct: 378 AQCQAASYTPTPGGSPGRGGQGPPAPVSSPPRRRGPY 414


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,287,406
Number of Sequences: 37544
Number of extensions: 263584
Number of successful extensions: 597
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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