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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00027
         (706 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850...    64   8e-11
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531...    64   1e-10
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989...    64   1e-10
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120...    48   1e-05
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299...    39   0.003
07_01_0542 + 4002542-4003119,4004347-4004404,4004518-4004835,400...    30   2.1  
12_02_0727 - 22564183-22564815,22564906-22565073,22565264-225653...    29   3.6  
07_01_0708 - 5339478-5339867                                           29   4.8  
02_05_0142 - 26227792-26228346,26228486-26228608,26229824-262300...    29   4.8  
01_06_1477 + 37645143-37647425                                         29   4.8  
01_06_0058 - 26056334-26056630,26057063-26057365,26057748-260578...    29   4.8  
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275...    28   6.3  
07_01_1067 + 9437996-9438093,9438368-9438419,9440437-9440511,944...    28   6.3  
08_01_0087 + 630355-630403,630502-630699,631858-631943,632238-63...    28   8.3  
07_03_1460 - 26687630-26688310                                         28   8.3  
04_01_0418 - 5531652-5531827,5535111-5535195,5535250-5535402,553...    28   8.3  
02_05_0235 - 27068516-27069032,27069697-27069788,27070056-270702...    28   8.3  

>08_01_0871 +
           8502396-8502417,8503606-8503732,8503891-8503990,
           8504725-8504793,8504870-8505043,8505196-8505373,
           8505462-8505594,8505702-8505864,8507031-8507181,
           8507266-8507366,8507633-8507788,8508105-8508173,
           8508256-8508324,8508403-8508540,8508639-8508767,
           8509013-8509053,8510019-8510106,8510199-8510339,
           8510428-8510553,8510671-8510736,8510994-8511291,
           8511387-8511595,8511689-8511802
          Length = 953

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 28/60 (46%), Positives = 41/60 (68%)
 Frame = +2

Query: 236 SEGHRKIYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAISTLAWTTSSGAQ 415
           +  + K + GDSYIIL+TT+    +L  DIHYWIG++++QDESG AAI T+    + G +
Sbjct: 67  ASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDESGTAAILTVELDAALGGR 126



 Score = 37.9 bits (84), Expect = 0.008
 Identities = 19/39 (48%), Positives = 24/39 (61%)
 Frame = +1

Query: 385 VGLDDKFGGTAVQHRETMGHESALFLSYFQTPLTYLEGG 501
           V LD   GG AVQ+RE  G+E+  FLSYF+  +    GG
Sbjct: 117 VELDAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGG 155



 Score = 36.7 bits (81), Expect = 0.018
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 183 TAGVQIWRIQNFEPIPVAQKDIGK 254
           T G++IWRI+NF+P+P+     GK
Sbjct: 49  TGGLEIWRIENFKPVPIPASSYGK 72


>06_03_0999 -
           26752410-26752523,26752601-26752830,26752914-26753169,
           26753763-26753828,26753921-26754046,26754148-26754288,
           26754377-26754387,26754523-26754670,26755326-26755454,
           26755573-26755710,26755808-26755876,26755955-26756023,
           26756565-26756720,26756885-26756985,26757068-26757215,
           26757540-26757702,26757833-26757965,26758049-26758226,
           26758330-26758572,26758664-26758732,26759063-26759187,
           26759727-26759766,26760756-26760812,26762831-26762935
          Length = 1004

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 25/59 (42%), Positives = 40/59 (67%)
 Frame = +2

Query: 239 EGHRKIYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAISTLAWTTSSGAQ 415
           E H + + GDSY+IL+TT+    +   DIHYW+G++++QDE+G AAI T+    + G +
Sbjct: 94  ESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGR 152



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 7/180 (3%)
 Frame = +3

Query: 186 AGVQIWRIQNFEPIPVAQKDIGK-----STKEIHTSFYGRPRTVATIYHGISTTGSVGSR 350
           +G++IWRI+  + +PV ++  G+     S   + T+          I++ +    S    
Sbjct: 76  SGLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEA 135

Query: 351 RKTSQEPPQFQR-WPGRQVRGHSGPAPRDHGSRKCFVPIIFPDTLDLFGGRESVGFNHVV 527
              + +  +      GR V+               F P I P+     GG  S GF H  
Sbjct: 136 GTAAIKTVELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEE----GGIAS-GFRHTE 190

Query: 528 TNAGAQ-KRMFQVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLK 704
            N      R+F  +GK  V V++V    +S+N  D F+L   + I+ F G  +   E+ K
Sbjct: 191 INEREHVTRLFVCRGKHTVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAK 250



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/39 (51%), Positives = 25/39 (64%)
 Frame = +1

Query: 385 VGLDDKFGGTAVQHRETMGHESALFLSYFQTPLTYLEGG 501
           V LD   GG AVQ+RE  G+E+  FLSYF+  +   EGG
Sbjct: 143 VELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEEGG 181



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
 Frame = +3

Query: 480 LDLFGGRESVGFNHVVTNAGAQK--------RMFQVKGK--RDVRVRQVDPQIASMNKGD 629
           L +F G  S G+   V+  G +          +F+V+G    +++  QVD    S+N   
Sbjct: 548 LVIFKGGVSTGYKKFVSENGIEDDTYSENGVALFRVQGSGPENMQAIQVDTAATSLNSSY 607

Query: 630 CFVLSLDNDIYVFVGEKAKNVEK 698
           C+VL   + ++ ++G  + ++++
Sbjct: 608 CYVLHDGDTLFTWIGNLSSSMDQ 630


>04_04_1062 -
           30498158-30498271,30498358-30498518,30498606-30498924,
           30499412-30499477,30499601-30499726,30499821-30499961,
           30500482-30500535,30501508-30501636,30501733-30501870,
           30501993-30502061,30502135-30502203,30502468-30502623,
           30503795-30503895,30503986-30504136,30504475-30504520,
           30504539-30504637,30504796-30504928,30505018-30505195,
           30505282-30505524,30505612-30505680,30505986-30506085,
           30506898-30507007
          Length = 923

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 26/60 (43%), Positives = 40/60 (66%)
 Frame = +2

Query: 236 SEGHRKIYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAISTLAWTTSSGAQ 415
           +  H K Y GDSYIIL+TT+    +   D+HYW+G++++QDE+G AAI T+    + G +
Sbjct: 54  TSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEAGTAAILTVELDAALGGR 113



 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 7/180 (3%)
 Frame = +3

Query: 186 AGVQIWRIQNFEPIPVAQKDIGK-----STKEIHTSFYGRPRTVATIYHGISTTGSVGSR 350
           +G+++WRI+NF+P+PV     GK     S   + T+          +++ +    S    
Sbjct: 37  SGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEA 96

Query: 351 RKTSQEPPQFQR-WPGRQVRGHSGPAPRDHGSRKCFVPIIFPDTLDLFGGRESVGFNHVV 527
              +    +      GR V+               F P I P      GG  S GFNHV 
Sbjct: 97  GTAAILTVELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQP----GGVAS-GFNHVE 151

Query: 528 TNAGAQ-KRMFQVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLK 704
            N      R++  +GK  V V++V    +S+N  D F+L   N I+ F G  +   E+ K
Sbjct: 152 VNQQDHVTRLYVCQGKHVVHVKEVPFVRSSLNHEDIFILDTANKIFQFNGSNSCIQERAK 211



 Score = 35.1 bits (77), Expect = 0.055
 Identities = 18/39 (46%), Positives = 22/39 (56%)
 Frame = +1

Query: 385 VGLDDKFGGTAVQHRETMGHESALFLSYFQTPLTYLEGG 501
           V LD   GG AVQ+RE  G E+   LSYF+  +    GG
Sbjct: 104 VELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGG 142



 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = +3

Query: 558 QVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVE 695
           Q  G  +++  QVD   +S+N   C++L   N ++ + G    +++
Sbjct: 540 QGSGSENMQAIQVDAVSSSLNSSYCYILHNGNTVFTWTGNLTTSLD 585


>03_03_0001 +
           13611070-13611172,13611812-13611873,13612001-13612072,
           13612158-13612394,13612473-13612650,13612731-13612863,
           13613686-13613845,13613925-13614078,13614159-13614262,
           13614354-13614512,13615399-13615467,13615543-13615611,
           13615772-13615909,13616044-13616124,13616805-13616933,
           13617717-13617864,13618007-13618017,13618094-13618234,
           13618314-13618439,13619164-13619220,13619355-13619453,
           13619540-13619762,13620236-13620480,13621325-13621438
          Length = 1003

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 25/46 (54%), Positives = 28/46 (60%)
 Frame = +1

Query: 385 VGLDDKFGGTAVQHRETMGHESALFLSYFQTPLTYLEGGNPSVLTT 522
           V LD   GG AVQHRE  G+ES  FLSYF+  +  LEGG  S   T
Sbjct: 90  VELDTMLGGRAVQHRELQGYESDKFLSYFKPCIIPLEGGFASGFKT 135



 Score = 44.4 bits (100), Expect = 9e-05
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = +2

Query: 278 ILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAISTLAWTTSSGAQ 415
           I  T S       +DIH+WIG++S+QDE+G AAI T+   T  G +
Sbjct: 54  ITTTCSKGGGAYLFDIHFWIGKDSSQDEAGTAAIKTVELDTMLGGR 99



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/54 (35%), Positives = 31/54 (57%)
 Frame = +3

Query: 543 QKRMFQVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLK 704
           + R++  KGKR +RV++V    +S+N  D F+L  +  IY F G  +   E+ K
Sbjct: 142 ETRLYICKGKRAIRVKEVPFARSSLNHDDVFILDTEKKIYQFNGANSNIQERAK 195



 Score = 35.9 bits (79), Expect = 0.031
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 251 KIYKGDSYIILRTTSDSRNNLSWDIHYWIGRES-TQDESGAAAISTLAWTTSSG 409
           K Y GD YI+L T         + + YWIG++S  +D+  A   +   W +  G
Sbjct: 420 KFYSGDCYIVLYTYHSGDKREEFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKG 473


>05_01_0383 +
           2990812-2990855,2991364-2991463,2991554-2991622,
           2991724-2991960,2992045-2992228,2992307-2992442,
           2992529-2992691,2992958-2993108,2993154-2993278,
           2993349-2993504,2993792-2993860,2993951-2994019,
           2994127-2994264,2994626-2994773,2994856-2994866,
           2995212-2995352,2995441-2995569,2995860-2995899,
           2996020-2996348,2996902-2996919
          Length = 818

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +2

Query: 245 HRKIYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAISTLAWTTSSGA 412
           H K Y G++YIIL T          ++HYW+G E+ +++   A+   +    + G+
Sbjct: 35  HGKFYTGNTYIILSTVELKSGVRQHNVHYWVGEEAKEEDCLTASDKAIELDVALGS 90



 Score = 37.1 bits (82), Expect = 0.014
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 385 VGLDDKFGGTAVQHRETMGHESALFLSYFQTPLTYLEG 498
           + LD   G   VQ+RET G ES  FLSYF+  +  ++G
Sbjct: 82  IELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQG 119


>07_01_0542 + 4002542-4003119,4004347-4004404,4004518-4004835,
            4005201-4005446,4005550-4005648,4005912-4006097,
            4006204-4006401,4006521-4006596,4006721-4007637
          Length = 891

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 22/77 (28%), Positives = 29/77 (37%)
 Frame = +3

Query: 312  YHGISTTGSVGSRRKTSQEPPQFQRWPGRQVRGHSGPAPRDHGSRKCFVPIIFPDTLDLF 491
            Y G    G   + R+ S   P   R          G   +DH S+  F+P      L+L 
Sbjct: 787  YRGGGGGGGAAAERERSSSSPPLVRVAISCPESRGG---KDHSSKLVFMPETLRGLLELG 843

Query: 492  GGRESVGFNHVVTNAGA 542
              R  V    VVT+ GA
Sbjct: 844  AARFGVSPTRVVTSGGA 860


>12_02_0727 -
           22564183-22564815,22564906-22565073,22565264-22565382,
           22565796-22565898,22566702-22566974,22567088-22567279,
           22568289-22568615
          Length = 604

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -1

Query: 613 EAICGSTCLTRTSRFPLTWNIRFWAPAFVTTWLKPTDSLPPNRSRVSGNMIGTKHFRDPW 434
           E +  STCL       +TW++      F+TT +   D L P+  +VS   + T+     W
Sbjct: 286 EKLSSSTCLAFGPAACMTWDLAESGKDFITTIVNRND-LVPSFGKVSAAKLRTEVMASSW 344


>07_01_0708 - 5339478-5339867
          Length = 129

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 348 RRKTSQEPPQFQRWPGRQVRGHSGPAPRDHGSR 446
           RR+    PP+ ++  GR+ +G   P PR HG R
Sbjct: 85  RRQEEPRPPRTRKRSGRRAKGDGIPPPR-HGRR 116


>02_05_0142 -
           26227792-26228346,26228486-26228608,26229824-26230084,
           26230658-26231116
          Length = 465

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 344 ESTQDESGAAAISTLAWTTSSGAQRSSTERP 436
           +ST+D S AAA     W+ SSG+  S+   P
Sbjct: 55  QSTEDSSAAAARPAAGWSRSSGSVSSARSIP 85


>01_06_1477 + 37645143-37647425
          Length = 760

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -1

Query: 544 WAPAFVTTWLKPTDSLPPNRSRVSGNMIGTKHFRDPWSLGAGPLCP-RTCRPG 389
           W+PA + + +  T +   N  R   +M    H   P ++G+G + P R   PG
Sbjct: 550 WSPAAIRSAMMTTAATLDNTGRSINDMARAGHAATPLAMGSGHIDPNRAADPG 602


>01_06_0058 -
           26056334-26056630,26057063-26057365,26057748-26057891,
           26057947-26058702,26058844-26059088,26059177-26060079,
           26060163-26060225,26060537-26061025,26061211-26061291,
           26061801-26061956,26062371-26062416
          Length = 1160

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +2

Query: 158 SGFCQCRQNSRCANMENTELRTNTRCSEGHRKIYKGDSYIILRTTSDSRNNL 313
           +G CQC ++ +C N    E  T T  S+G       DSY + R  +DS++ +
Sbjct: 774 NGRCQCMRDGKCRNNYLREFNTTT--SQGK------DSYPLYRRRNDSKSKV 817


>07_03_1691 -
           28726307-28726323,28726588-28726953,28727483-28727567,
           28728255-28728387,28729793-28730328
          Length = 378

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 420 PAPRDHGSRKCFVPIIFPDTLDLFGGRESVGFNHV 524
           P P  H   +  V   FPD L L GG +  GF+ +
Sbjct: 48  PPPPHHRRARSEVAFRFPDDLGLGGGADGGGFDEI 82


>07_01_1067 +
           9437996-9438093,9438368-9438419,9440437-9440511,
           9441455-9441523,9443711-9444232
          Length = 271

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +3

Query: 288 RPRTVATIYHGISTTGSVGSRRKTSQEPPQFQRWPGRQVR-----GHSGPAPRDHGSRKC 452
           +PR +    H +S T +  +  + ++ PPQ +R    ++R       SG   R  GSR  
Sbjct: 130 QPRRLHGAVHLLSATPAEDAEERPTRRPPQAERRESAKLRINRALNQSGSVGRAFGSRFG 189

Query: 453 FVPIIFPDT 479
            V ++F  T
Sbjct: 190 IVVMLFTRT 198


>08_01_0087 +
           630355-630403,630502-630699,631858-631943,632238-632946,
           633029-633194,633459-633934,634023-634873,635078-635987,
           636597-636784
          Length = 1210

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +2

Query: 158 SGFCQCRQNSRCANMENTELRTNTRCSEGHRKIYKGDSYIILRTTSDSRNNLSWDIHYWI 337
           +G CQC ++ +C N  N     N   S+G       DSY + R  +D ++ + +    W+
Sbjct: 802 NGKCQCMRDGKCRN--NYPREFNPTTSQGK------DSYPLYRRRNDGKSRMRYRDARWV 853


>07_03_1460 - 26687630-26688310
          Length = 226

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 489 FGGRESVGFNHVVTNAGAQKRMFQVKGKRDVRVRQVD 599
           FGG  +VG N  V  A    R+F  +G+R V  R+ D
Sbjct: 98  FGGNGAVGGNEWVVEALRGARVFIAEGERSVWRRKTD 134


>04_01_0418 -
           5531652-5531827,5535111-5535195,5535250-5535402,
           5535516-5535632,5536136-5536363
          Length = 252

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 558 QVKGKRDVRVRQVDPQIASMNKGDCFVLS 644
           +VKG++D   R    QI  +  GDC+++S
Sbjct: 125 KVKGEKDEVYRGASTQILGVAVGDCYIMS 153


>02_05_0235 - 27068516-27069032,27069697-27069788,27070056-27070289,
            27071569-27071676,27071796-27071855,27072368-27072443,
            27072550-27072710,27076919-27076981,27077061-27077148,
            27077568-27078308,27078406-27079033,27079314-27079368,
            27082073-27083527
          Length = 1425

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +3

Query: 372  PQFQRWPGRQVRG-HSGPAPRDHGSRKCFVP-IIFPDTLDLFGGRESVGFNH 521
            PQF R     V   H  P P +H S+K F   +     LDL  G   +G NH
Sbjct: 1372 PQFGRMGHVSVWNLHDKPLPSEHASQKGFEDRVKLKPPLDLRSGPPHLGCNH 1423


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,121,691
Number of Sequences: 37544
Number of extensions: 512072
Number of successful extensions: 1561
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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