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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00020
         (703 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0043 + 5242496-5242554,5242673-5242778,5243586-5243723,524...   127   1e-29
02_02_0482 - 10819562-10819813,10820773-10820952,10822073-108221...   125   3e-29
12_02_0012 - 12309332-12310228,12311087-12311669,12311945-123120...   124   5e-29
04_04_0788 + 28064684-28066584,28066692-28066815,28066908-280672...    38   0.006
06_03_0290 - 19193707-19193752,19193822-19194090                       28   6.2  
01_05_0073 - 17899175-17899756                                         28   6.2  
10_08_1045 - 22535516-22535593,22535681-22535756,22535843-225359...    28   8.3  
03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397...    28   8.3  

>03_02_0043 +
           5242496-5242554,5242673-5242778,5243586-5243723,
           5243794-5243979,5244075-5244275,5244362-5244460
          Length = 262

 Score =  127 bits (306), Expect = 1e-29
 Identities = 58/90 (64%), Positives = 73/90 (81%)
 Frame = +3

Query: 237 KVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 416
           + + +IRL AE VQG+NVL NF GM  TTDKLR +VKKWQTLIEA++DVKTTDGY+LR+F
Sbjct: 79  QAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLF 138

Query: 417 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKM 506
           CIGFT +     ++TCYAQ +Q+R IR+KM
Sbjct: 139 CIGFTKRRPNQVKRTCYAQASQIRQIRRKM 168



 Score =  101 bits (241), Expect = 7e-22
 Identities = 47/66 (71%), Positives = 57/66 (86%)
 Frame = +1

Query: 58  VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 237
           VDPF +KDWYD+KAPS+F+ R +G TLV+RTQGTKIASEGLK RVFEVSLADLQ D D  
Sbjct: 21  VDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED-- 78

Query: 238 RSFRKL 255
           +++RK+
Sbjct: 79  QAYRKI 84



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 17/31 (54%), Positives = 26/31 (83%)
 Frame = +1

Query: 610 IYPLRDVCNPKVKVLKRPRFEISKLMELHGE 702
           I+PL++V   KVK+LK P+F++ KLME+HG+
Sbjct: 204 IFPLQNVFVRKVKILKAPKFDLGKLMEVHGD 234



 Score = 38.3 bits (85), Expect = 0.006
 Identities = 19/57 (33%), Positives = 34/57 (59%)
 Frame = +2

Query: 494 QKENVEIITRDVTNSELREVVNKLIPDSIAKDIEKAAMASTLCAMFAIRK*KC*RGP 664
           +++ VEI+    ++ +L+E+V+K IP+ I K+IEKA  +        +RK K  + P
Sbjct: 165 RRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAP 221


>02_02_0482 -
           10819562-10819813,10820773-10820952,10822073-10822150,
           10823056-10823256,10823365-10823550,10823646-10823783,
           10824396-10824501,10824634-10824692
          Length = 399

 Score =  125 bits (302), Expect = 3e-29
 Identities = 57/90 (63%), Positives = 72/90 (80%)
 Frame = +3

Query: 237 KVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 416
           + + ++RL AE VQGRNVL NF GM  TTDKLR +VKKWQTLIEA++DVKTTD Y+LR+F
Sbjct: 79  QAYRKVRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLF 138

Query: 417 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKM 506
           CIGFT +     ++TCYAQ +Q+R IR+KM
Sbjct: 139 CIGFTKRRPNQVKRTCYAQASQIRQIRRKM 168



 Score =  101 bits (241), Expect = 7e-22
 Identities = 47/66 (71%), Positives = 58/66 (87%)
 Frame = +1

Query: 58  VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 237
           VDPF++KDWYD+KAP++FS R +G TLV+RTQGTKIASEGLK RVFEVSLADLQ D D  
Sbjct: 21  VDPFSKKDWYDIKAPTVFSVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED-- 78

Query: 238 RSFRKL 255
           +++RK+
Sbjct: 79  QAYRKV 84



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 17/31 (54%), Positives = 26/31 (83%)
 Frame = +1

Query: 610 IYPLRDVCNPKVKVLKRPRFEISKLMELHGE 702
           I+PL++V   KVK+LK P+F++ KLME+HG+
Sbjct: 204 IFPLQNVFIRKVKILKAPKFDLGKLMEVHGD 234



 Score = 37.1 bits (82), Expect = 0.013
 Identities = 19/57 (33%), Positives = 33/57 (57%)
 Frame = +2

Query: 494 QKENVEIITRDVTNSELREVVNKLIPDSIAKDIEKAAMASTLCAMFAIRK*KC*RGP 664
           +++ VEI+    +  +L+E+V+K IP+ I K+IEK+  +        IRK K  + P
Sbjct: 165 RRKMVEIMANQASTCDLKELVSKFIPEVIGKEIEKSTSSIFPLQNVFIRKVKILKAP 221


>12_02_0012 -
           12309332-12310228,12311087-12311669,12311945-12312051,
           12313190-12313237,12315139-12315216,12315300-12315500,
           12315612-12315797,12315870-12316007,12318311-12318416,
           12318529-12318587
          Length = 800

 Score =  124 bits (300), Expect = 5e-29
 Identities = 57/90 (63%), Positives = 72/90 (80%)
 Frame = +3

Query: 237 KVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 416
           + + +IRL AE VQG+NVL NF GM  TTDKLR +VKKWQTLIEA++DVKTTD Y+LR+F
Sbjct: 79  QAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLF 138

Query: 417 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKM 506
           CIGFT +     ++TCYAQ +Q+R IR+KM
Sbjct: 139 CIGFTKRRPNQVKRTCYAQASQIRQIRRKM 168



 Score =  101 bits (242), Expect = 6e-22
 Identities = 48/66 (72%), Positives = 57/66 (86%)
 Frame = +1

Query: 58  VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 237
           VDPF +KDWYD+KAPS+F+ R VG TLV+RTQGTKIASEGLK RVFEVSLADLQ D D  
Sbjct: 21  VDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED-- 78

Query: 238 RSFRKL 255
           +++RK+
Sbjct: 79  QAYRKI 84



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 17/31 (54%), Positives = 26/31 (83%)
 Frame = +1

Query: 610 IYPLRDVCNPKVKVLKRPRFEISKLMELHGE 702
           I+PL++V   KVK+LK P+F++ KLME+HG+
Sbjct: 204 IFPLQNVFVRKVKILKAPKFDLGKLMEVHGD 234



 Score = 38.3 bits (85), Expect = 0.006
 Identities = 19/57 (33%), Positives = 34/57 (59%)
 Frame = +2

Query: 494 QKENVEIITRDVTNSELREVVNKLIPDSIAKDIEKAAMASTLCAMFAIRK*KC*RGP 664
           +++ VEI+    ++ +L+E+V+K IP+ I K+IEKA  +        +RK K  + P
Sbjct: 165 RRKMVEIMVNQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAP 221


>04_04_0788 +
           28064684-28066584,28066692-28066815,28066908-28067285,
           28067286-28067488,28067615-28067897
          Length = 962

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = +3

Query: 288 VLCNFHGMDLTTDKLRWM-VKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTC 464
           ++C+     L   KL  + + KW+ L+   I  +   G+V+R+ C+ F  ++ L ++K  
Sbjct: 332 LVCSLSIRSLANKKLSGLHLWKWELLVFVLICGRLVSGWVIRI-CVFFVERNFLLRKKVL 390

Query: 465 YAQHTQVRAIRKKMWKSL 518
           Y  +   RA+R  +W  L
Sbjct: 391 YFVYGVRRAVRNVLWLGL 408


>06_03_0290 - 19193707-19193752,19193822-19194090
          Length = 104

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 292 SATSTAWTSQPISSGGWLKNGRLSSKPTLM 381
           +A S A T  P  S GW+  G  S+ P+L+
Sbjct: 67  AAGSAARTRSPSQSNGWITGGSASAMPSLV 96


>01_05_0073 - 17899175-17899756
          Length = 193

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +3

Query: 591 SRRLPWHLPSARCLQSESESVEEAPFRDLEVDGTS 695
           SRRL W L  +RC    S      P RD+ V  TS
Sbjct: 145 SRRLQWRLRHSRCASFSSPDQRSCP-RDIAVHKTS 178


>10_08_1045 -
           22535516-22535593,22535681-22535756,22535843-22535946,
           22536048-22536176,22536539-22536700,22537029-22537259,
           22537345-22537428,22537515-22537583,22537671-22537739,
           22537827-22537889,22537913-22538052,22538527-22539097
          Length = 591

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +2

Query: 383 EDNRWIRSTCLLHWFHQ*GLLEPTQDVLRPAHSGQSNQKENVEIITRDVTNSELRE 550
           E+N WI S    H+F    +++     +  + S Q  + +NV+ ITRD   S+  E
Sbjct: 220 ENNLWI-SMMYEHYFGPANIVDDITLAIECSKSSQIQKDKNVQDITRDSEESKQSE 274


>03_05_0791 +
           27736978-27737217,27737648-27739191,27739512-27739763,
           27739844-27739954,27740042-27740102,27740373-27740558
          Length = 797

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 201 NFENSSLQSFRSNFRSLGTVDKRGADLPLAE 109
           +FENS LQSF     +L +  K+G   P  E
Sbjct: 216 SFENSELQSFTDKIENLSSSQKKGYFKPKRE 246


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,779,166
Number of Sequences: 37544
Number of extensions: 433407
Number of successful extensions: 1276
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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