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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a15r
         (748 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803...   212   2e-55
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553...   212   2e-55
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065...   212   3e-55
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760...   210   7e-55
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629...   209   2e-54
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448...   205   3e-53
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593...   129   6e-35
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007...   105   4e-23
06_03_1237 + 28602250-28604196                                         30   2.2  
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973...    29   3.0  
08_01_0533 + 4625376-4625709,4625799-4625966,4627428-4627689,462...    29   3.0  
02_02_0106 + 6814391-6817007,6817086-6817462                           29   3.9  
04_04_1588 - 34633057-34633824                                         28   6.9  

>04_04_0141 +
           23079516-23079925,23080006-23080084,23080204-23080326,
           23081655-23081771,23081886-23081945
          Length = 262

 Score =  212 bits (518), Expect = 2e-55
 Identities = 100/141 (70%), Positives = 116/141 (82%)
 Frame = -1

Query: 706 LGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 527
           L L + HL+P ++ PESKVFYLKMKGDYYRYLAE  TG  R    E++  AY+ A +I+ 
Sbjct: 108 LKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIAL 167

Query: 526 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 347
           A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLI
Sbjct: 168 AELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLI 227

Query: 346 MQLLRDNLTLWTSDTQGDGDE 284
           MQLLRDNLTLWTSD   D  E
Sbjct: 228 MQLLRDNLTLWTSDISEDTAE 248


>02_04_0360 +
           22353057-22353691,22354716-22355144,22355233-22355311,
           22355472-22355594,22356256-22356372,22356636-22356833
          Length = 526

 Score =  212 bits (518), Expect = 2e-55
 Identities = 99/134 (73%), Positives = 114/134 (85%)
 Frame = -1

Query: 706 LGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 527
           L L D HL+P ++ PESKVFYLKMKGDYYRYLAE  TG  R    E++  AY+ A +I+ 
Sbjct: 326 LKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIAL 385

Query: 526 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 347
           A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLI
Sbjct: 386 AELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLI 445

Query: 346 MQLLRDNLTLWTSD 305
           MQLLRDNLTLWTSD
Sbjct: 446 MQLLRDNLTLWTSD 459


>08_02_0753 -
           20805672-20805731,20805825-20805941,20806394-20806516,
           20806700-20806778,20806867-20807258
          Length = 256

 Score =  212 bits (517), Expect = 3e-55
 Identities = 103/145 (71%), Positives = 116/145 (80%), Gaps = 1/145 (0%)
 Frame = -1

Query: 706 LGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 527
           L L D HL+P ++  ESKVFYLKMKGDY+RYLAE  TG  R    E +  AY+ A +I+ 
Sbjct: 102 LKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIAL 161

Query: 526 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 347
           A + PTHPIRLGLALNFSVFYYEILNSPDKAC LAKQAFD+AI+ELDTL E+SYKDSTLI
Sbjct: 162 ADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLI 221

Query: 346 MQLLRDNLTLWTSD-TQGDGDEPAE 275
           MQLLRDNLTLWTSD T+  GDE  E
Sbjct: 222 MQLLRDNLTLWTSDLTEDGGDEVKE 246


>11_06_0036 +
           19474848-19475188,19475696-19475774,19475880-19476002,
           19476970-19477086,19477169-19477228
          Length = 239

 Score =  210 bits (514), Expect = 7e-55
 Identities = 98/141 (69%), Positives = 113/141 (80%)
 Frame = -1

Query: 706 LGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 527
           L L D HL+P A   ESKVFYLKMKGDY+RYLAE  +G+ R    E +  AY+ A +I+ 
Sbjct: 85  LALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIAL 144

Query: 526 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 347
           A + PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD+L E+SYKDSTLI
Sbjct: 145 ADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLI 204

Query: 346 MQLLRDNLTLWTSDTQGDGDE 284
           MQLLRDNLTLWTSD   DG +
Sbjct: 205 MQLLRDNLTLWTSDANDDGGD 225


>03_05_0881 +
           28461857-28462263,28462357-28462435,28462798-28462920,
           28463632-28463748,28463861-28463917
          Length = 260

 Score =  209 bits (510), Expect = 2e-54
 Identities = 100/141 (70%), Positives = 113/141 (80%)
 Frame = -1

Query: 706 LGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 527
           L L D HL+P A+  ESKVFYLKMKGDY+RYLAE  +G  R    E++  AY+ A +I+ 
Sbjct: 107 LKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIAL 166

Query: 526 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 347
           A +  THPIRLGLALNFSVFYYEILNSPD+AC LAKQAFDDAIAELDTL E+SYKDSTLI
Sbjct: 167 ADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLI 226

Query: 346 MQLLRDNLTLWTSDTQGDGDE 284
           MQLLRDNLTLWTSD   DG +
Sbjct: 227 MQLLRDNLTLWTSDNAEDGGD 247


>08_02_1026 +
           23743186-23743686,23743793-23743915,23744734-23744850,
           23744948-23745001
          Length = 264

 Score =  205 bits (501), Expect = 3e-53
 Identities = 97/141 (68%), Positives = 114/141 (80%)
 Frame = -1

Query: 706 LGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 527
           L L D+ L+P A+  ++KVFYLKMKGDY+RYLAE  TG  R    + +  AYQ A +I+ 
Sbjct: 112 LRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAM 171

Query: 526 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 347
            ++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL E+SYKDSTLI
Sbjct: 172 KELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLI 231

Query: 346 MQLLRDNLTLWTSDTQGDGDE 284
           MQLLRDNLTLWTSD Q DG +
Sbjct: 232 MQLLRDNLTLWTSDMQDDGGD 252


>01_01_0767 +
           5931031-5931281,5931414-5931594,5932020-5932129,
           5932212-5932360,5932686-5932738,5933168-5933260
          Length = 278

 Score =  129 bits (312), Expect(2) = 6e-35
 Identities = 61/93 (65%), Positives = 73/93 (78%)
 Frame = -1

Query: 544 AFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSY 365
           A + ++  + PT PIRLGLALN SVFY EI+NSPDKACQLAK AFD+A+AEL +L+E++Y
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENY 205

Query: 364 KDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 266
           KDSTLIMQLLRDNL LW SD   D D+  E  D
Sbjct: 206 KDSTLIMQLLRDNLALWNSDMADDADDIRERTD 238



 Score = 36.3 bits (80), Expect(2) = 6e-35
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = -1

Query: 634 KGDYYRYLAEVATGETRHSVVEDSQKAYQ 548
           KGDYYRYLAE  TG  +  V E S  AY+
Sbjct: 85  KGDYYRYLAEFKTGTEKIEVSELSLNAYE 113


>11_06_0360 -
           22699524-22699529,22699865-22699899,22700650-22700792,
           22701165-22701220,22701367-22701454,22702737-22703037,
           22704365-22704428
          Length = 230

 Score =  105 bits (252), Expect = 4e-23
 Identities = 58/131 (44%), Positives = 84/131 (64%)
 Frame = -1

Query: 688 HLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPT 509
           H +P A++ E+ VF+ KMKGDYYRYLAE +TG  + +  + S  AYQ A+  ++      
Sbjct: 105 HCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQ-AWPCAQL----- 158

Query: 508 HPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRD 329
                     FS+   EI+NSP++A Q+AKQA D+A AE+++   + YKDS L+MQLL++
Sbjct: 159 ----------FSLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKE 206

Query: 328 NLTLWTSDTQG 296
           NL LWTS+  G
Sbjct: 207 NLALWTSELTG 217


>06_03_1237 + 28602250-28604196
          Length = 648

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 20/84 (23%), Positives = 40/84 (47%)
 Frame = -1

Query: 739 RKGAQRNLLRRLGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQ 560
           R G   N++   GL D +      +  SKVFY   + + Y Y + +A G   H    ++ 
Sbjct: 302 RTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIA-GLASHGRASEAI 360

Query: 559 KAYQDAFEISKAKMQPTHPIRLGL 488
             +++   +++A ++P H   +G+
Sbjct: 361 ALFKEM--VNRANVEPNHVTFIGV 382


>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
            21997494-21997838,21998323-21999240,21999312-21999640,
            21999709-21999832,21999901-22000071,22000188-22001648,
            22002647-22002910,22003866-22004189
          Length = 1831

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = -1

Query: 736  KGAQRNLLRRLGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAE-VATG 593
            +G + N+     L D+ +I + +  E + F LK   DY++YL+E ++TG
Sbjct: 1576 QGGKSNVFFAKSLDDRFIIKQVTKTELESF-LKFGLDYFKYLSESISTG 1623


>08_01_0533 +
           4625376-4625709,4625799-4625966,4627428-4627689,
           4627787-4627934,4628453-4628496,4628812-4628859,
           4629245-4630509,4630741-4630839,4630916-4631097,
           4631186-4631246,4631488-4631725,4631818-4631971,
           4632042-4632335
          Length = 1098

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = -1

Query: 475 SVFYYEILNSPDKACQLAKQAFDDAIAEL-DTLNEDSYKDSTLIMQLLRD-NLTLWTSDT 302
           S   Y  +  PD    + K++FD+ + E     +  +Y  S +   ++ D    LWT + 
Sbjct: 676 SFLTYPSMKVPDNFIYIHKRSFDECMVECRSNCSCVAYAYSNISSGIIDDTRCLLWTGEL 735

Query: 301 QGDGDEPAEGGDN*YLAA 248
             D ++  +GG+N Y+ A
Sbjct: 736 I-DMEKVTQGGENLYIRA 752


>02_02_0106 + 6814391-6817007,6817086-6817462
          Length = 997

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -3

Query: 215 CL*ENE*HSRTSSGAVSSPKPTRAVACKNVKSRSQRTFPFRLKL-NVVSSLTVL 57
           CL +N  H   S   +SSP PT    C N+K        F  KL N ++SL  L
Sbjct: 93  CLLKNLTHLDVSYNNISSPFPTMLYNCSNLKYLDLSNNAFAGKLPNDINSLPAL 146


>04_04_1588 - 34633057-34633824
          Length = 255

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 227 KCVCWGECGEILVVAALGRLVAIALSV*RPK 319
           +CVCW     +++  ALG    I  +V +PK
Sbjct: 68  RCVCWTLLAVLVLAVALGATAGILYAVFKPK 98


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,864,598
Number of Sequences: 37544
Number of extensions: 381320
Number of successful extensions: 1050
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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