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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a13r
         (780 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883...    31   1.0  
10_08_0920 - 21580057-21580926                                         31   1.4  
07_01_0159 - 1116786-1117153,1117251-1119936                           30   1.8  
07_01_0287 - 2094333-2094542,2094719-2095999                           30   2.4  
02_02_0475 - 10746593-10748104                                         30   2.4  
07_01_0292 - 2117212-2117326,2117402-2117527,2117654-2117791,211...    29   3.1  
04_03_0857 + 20352331-20352582,20352740-20352951,20353047-203533...    29   3.1  
04_04_0673 - 27168305-27168874,27168977-27169099,27169180-271694...    29   4.1  
04_03_0858 + 20357519-20357573,20358072-20358119,20360675-203609...    29   4.1  
03_05_1002 - 29594462-29594581,29594686-29594781,29594857-295949...    29   4.1  
02_05_0584 - 30135768-30135790,30136104-30136866                       29   4.1  
01_01_0046 - 331758-332627                                             29   4.1  
08_02_0096 - 12296913-12296951,12297205-12297282,12297335-122973...    29   5.5  
02_04_0086 + 19610899-19610992,19613399-19613652,19613744-196139...    29   5.5  
04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965...    24   7.1  
09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,250...    28   7.2  
01_05_0627 + 23802235-23802853,23803357-23803430,23804207-238043...    28   7.2  
09_04_0659 + 19282366-19282584,19282668-19282759,19282868-192829...    28   9.6  
09_02_0082 - 4060018-4061604                                           28   9.6  
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787...    28   9.6  
04_04_1129 - 31107892-31110246                                         28   9.6  
04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787     28   9.6  
03_01_0640 - 4683970-4684481,4685197-4685343,4685606-4686764,468...    28   9.6  
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090...    28   9.6  

>07_03_1042 +
           23487326-23487443,23487555-23487957,23488057-23488397,
           23488621-23489660
          Length = 633

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -1

Query: 378 EAIHTDGSTTGLGIGSAVANA 316
           EAI TDGS+T  G GS+V NA
Sbjct: 346 EAIGTDGSSTSCGTGSSVTNA 366


>10_08_0920 - 21580057-21580926
          Length = 289

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 565 KERQELSQTATDSGHS-SSCSSIVRQSKSSPVQNNYV 672
           KE QE S +++ S  S SSCSS V  + SSP + N V
Sbjct: 5   KELQETSSSSSSSAASTSSCSSAVTDAWSSPARPNAV 41


>07_01_0159 - 1116786-1117153,1117251-1119936
          Length = 1017

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 44/160 (27%), Positives = 61/160 (38%), Gaps = 5/160 (3%)
 Frame = -1

Query: 597 GRGLGQFLTFLNRVTGAPFNTMHLVGFSLGAHLVGNAGRELGGRVARVTGLDPAGP-LWN 421
           G  L   L F   +T  PF  M    ++   HL    G     R  RV  LD  G  L  
Sbjct: 36  GTDLASLLDFKRAITNDPFGAMS--SWNTNTHLCRWKGVTCDQRAHRVVALDLVGQTLTG 93

Query: 420 TNSNRLNARDGVYVEAIHTDGSTTGLGIGSAVANAD---FFPNGGNSQPGCTL-SLCNHN 253
             S+ L      Y+ ++    +     +   + N     F    GNS  G    +L N  
Sbjct: 94  QISHSLGNMS--YLTSLSLPDNLLSGRVPPQLGNLRKLVFLDLSGNSLQGIIPEALINCT 151

Query: 252 RAWELFASTVTRNHLVGNQCSNMLQVSSNSCRGNRLNMGN 133
           R   L    V+RNHLVG+   N+  +S  + R  RL+  N
Sbjct: 152 RLRTL---DVSRNHLVGDITPNIALLS--NLRNMRLHSNN 186


>07_01_0287 - 2094333-2094542,2094719-2095999
          Length = 496

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
 Frame = +2

Query: 299 PFGKKSALATADPMPRPV-VLPSVWIAST*TPSLALRRLELVFHRGPAGSKPVTRATR-- 469
           P G+ +  AT+ P P+PV V PS+ + S   P      + + F  G       T ATR  
Sbjct: 60  PVGRDAGGATSSP-PQPVHVTPSILVGSIHAPVFQGELVGMKFGVGSGSMGAGTSATRRL 118

Query: 470 PPSSRPALPT 499
           P +   ALPT
Sbjct: 119 PATGFGALPT 128


>02_02_0475 - 10746593-10748104
          Length = 503

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 541 ERSSCYSIKERQELSQTATDSGHSSSCSSIVRQSKSSPVQNNYVHVRFAE 690
           E+S CY + E+Q+LS         S C  +  Q + S  +  Y  V + E
Sbjct: 343 EQSQCYILPEQQQLSDQEYAYSEQSQCYILPEQQELSNQEAEYAFVCYDE 392


>07_01_0292 -
           2117212-2117326,2117402-2117527,2117654-2117791,
           2117904-2118323,2118421-2118591,2118701-2118880,
           2118988-2119140,2119226-2119384,2119841-2120152,
           2120285-2120452,2120851-2121050,2122207-2122589,
           2123244-2123625
          Length = 968

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 25/85 (29%), Positives = 39/85 (45%)
 Frame = +1

Query: 448 TGNTSYPSTELTASIAN*MRAQTETN*MHGVERSSCYSIKERQELSQTATDSGHSSSCSS 627
           T N+S PS  L  S +    A   T   +  ++ S    K++ + +    D  +SS+CSS
Sbjct: 669 TSNSS-PSMNLPLSESIDAEAAVNTTTANSKKKPSRSRSKKQTDENLAVCDVNNSSNCSS 727

Query: 628 IVRQSKSSPVQNNYVHVRFAEVSIS 702
             R+ K S    N V  +  + SIS
Sbjct: 728 GARKRKRSITDKNQVVQKKMKGSIS 752


>04_03_0857 +
           20352331-20352582,20352740-20352951,20353047-20353308,
           20353418-20353726
          Length = 344

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 531 HLVGFSLGAHLVGNAGRELGGRVARVTGLDPAGPLW 424
           +L+GFS+G  ++ +  + +  R+A V  L P G  W
Sbjct: 134 YLMGFSMGGEIMWSCLKHISHRLAGVAILGPVGNYW 169


>04_04_0673 -
           27168305-27168874,27168977-27169099,27169180-27169440,
           27169723-27169970,27170403-27170483,27171530-27171902
          Length = 551

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 100 EESGSALSQVVISHVETVSAARVRRHLQHVAALVTDQMISGH 225
           EES S+ +   +     V+AA  RR + H+AAL  +   S H
Sbjct: 492 EESSSSPAAAAVEDDVAVAAAAARRRMLHLAALGENASASAH 533


>04_03_0858 +
           20357519-20357573,20358072-20358119,20360675-20360922,
           20361152-20361363,20361480-20361741,20361832-20362143
          Length = 378

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 531 HLVGFSLGAHLVGNAGRELGGRVARVTGLDPAGPLW 424
           +L+GFS+G  ++ +  + +  R+A V  L P G  W
Sbjct: 167 YLMGFSMGGEIMWSCLKHISHRLAGVAILAPVGNYW 202


>03_05_1002 -
           29594462-29594581,29594686-29594781,29594857-29594916,
           29595574-29595618,29595956-29596070,29596200-29596246,
           29596529-29596822
          Length = 258

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
 Frame = +2

Query: 443 SKPVTRATRPPSSRPALPTKCAPRLKPTR-CMVLNG---APVTLLRNVKNCPKPRPTAGT 610
           S PV R + PPS+RPA   +    +   R C  L G   AP        + P   P AG+
Sbjct: 9   SLPVPRVSLPPSARPAAAPRHGLLIPGRRGCFRLRGSPAAPAAAASGSPSVPSSSPEAGS 68


>02_05_0584 - 30135768-30135790,30136104-30136866
          Length = 261

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 138 PC*DGFRGTSSKTPAACCCTGYR 206
           PC D    T+  TP A CC G+R
Sbjct: 181 PCADYLTNTAVPTPPATCCDGFR 203


>01_01_0046 - 331758-332627
          Length = 289

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
 Frame = +2

Query: 434 PAGSKPVTRATRPPSSR---PALP-TKCAPRLKPTRCMVLNGAPVTLLRNVKNCPKPRP 598
           P  S    R   PPSSR   P +P  + AP L PT   +    P    R+ ++ P P+P
Sbjct: 30  PPPSSSRYRPPSPPSSRHPHPTIPAARAAPPLGPTNRRLHQQPPPPASRDGRHEPPPKP 88


>08_02_0096 -
           12296913-12296951,12297205-12297282,12297335-12297345,
           12298140-12299044,12299074-12299243
          Length = 400

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 780 FNANNPTXVIAHGWLSNQNTDINPTIRDAY 691
           F   N   +I + W +N  + I+P IRD Y
Sbjct: 220 FTLRNENAIIKYNWAANCLSKIDPPIRDVY 249


>02_04_0086 +
           19610899-19610992,19613399-19613652,19613744-19613955,
           19614059-19614320,19614432-19614728
          Length = 372

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 531 HLVGFSLGAHLVGNAGRELGGRVARVTGLDPAGPLW 424
           +L+G+S+G  ++ +  + +  R+A V+ L P G  W
Sbjct: 166 YLIGYSMGGEIMWSCLKNIPHRLAGVSILGPVGNYW 201


>04_04_1630 -
           34896021-34896143,34896329-34896403,34896500-34896556,
           34897176-34897352,34897426-34897492,34898043-34898101,
           34898188-34898241,34898455-34898604,34898709-34898918,
           34898980-34899039,34899399-34899527,34899616-34899720,
           34899935-34900024,34900630-34900695,34901047-34901115,
           34901348-34901467,34901572-34901634,34901681-34901817,
           34902070-34902160,34902298-34902463,34902700-34904172,
           34905666-34905940,34906322-34906819,34906996-34907145,
           34907840-34907911,34908006-34908266,34908478-34908558,
           34908745-34908996,34909323-34909382,34909602-34909853,
           34910385-34910549,34910589-34910849,34911267-34912307,
           34913398-34913457,34914055-34914165,34914448-34914534,
           34915227-34915300,34915397-34915490,34915644-34915689,
           34916397-34916521
          Length = 2501

 Score = 24.2 bits (50), Expect(2) = 7.1
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +2

Query: 458 RATRPPSSRPALPTKCAPRLKPTRCMVLNGAPVTLLRNVKNCPKPRPTA 604
           RA R P   P +     P   PT   +  G P   + +    PKPRP+A
Sbjct: 220 RAPRKPL--PPIAAHVPPFPAPTSTAIAMGKPKQQVLSRFFSPKPRPSA 266



 Score = 22.2 bits (45), Expect(2) = 7.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 584 PKPRPTAGTPLAAV 625
           P PRP A  P+AAV
Sbjct: 275 PPPRPPAEPPVAAV 288


>09_01_0175 -
           2509014-2509064,2509389-2509490,2509603-2509729,
           2509852-2511564,2512335-2512424,2512533-2512801,
           2513118-2513687,2513703-2514065
          Length = 1094

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 586 QTATDSGHSSSCSSIVRQSKSSPVQNNYVH-VRFAEVSISDGRI 714
           Q A        C+++++ S  +P++ NY++ +R  E  I D  I
Sbjct: 720 QGAPTDNEEEECTTLIKASHFTPIETNYLNQIRRLESDIEDASI 763


>01_05_0627 +
           23802235-23802853,23803357-23803430,23804207-23804364,
           23804640-23804964
          Length = 391

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +2

Query: 452 VTRATRPPSSRPALPTKCAPRLKP 523
           V  A RPP + PA PT  APR  P
Sbjct: 159 VAIAPRPPPAEPAEPTAIAPRPPP 182


>09_04_0659 +
           19282366-19282584,19282668-19282759,19282868-19282958,
           19283393-19283512,19283638-19283730,19283795-19283933,
           19284060-19284141,19284229-19284361,19285024-19286010
          Length = 651

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = -1

Query: 630 YATAARGVPAVGRGLGQFLTFLNRVTGAPFNTMHLVGFSLGAHLVGNAGRE 478
           Y       PA   G G   +     TGA   T+H+V  + GA L G AG E
Sbjct: 536 YENTCTAAPAAAGGGGNGSSPAAAYTGALGGTIHVVAGTGGARLRGYAGGE 586


>09_02_0082 - 4060018-4061604
          Length = 528

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 33/102 (32%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
 Frame = +2

Query: 341 PRPVVLPSVWIAST*TPSLALRRLELVFHRGPAGSKPVT-RATRPPSS-RPALPTKCAPR 514
           P PV    V +  T +P+ A       F  G A S   T RA   P + R   P  C PR
Sbjct: 113 PEPVPSVPVPLGLTMSPTTA----HYSFSYGGASSSSATPRAPIAPLALRAPAPHLCVPR 168

Query: 515 -LKPTRCMVLNGAPVTLLRNVKNCPKPRPTAGTPLAAVA*SD 637
            L P         P  L  +V   P P P   TPLA    +D
Sbjct: 169 VLSPPA-----PTPPVLATHVPTPPAPAPPVPTPLAPAPPAD 205


>05_05_0230 -
           23476919-23477372,23477656-23477695,23478578-23478700,
           23479114-23479151,23479289-23479674,23479875-23481053,
           23481805-23481928,23482733-23482779
          Length = 796

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
 Frame = +2

Query: 437 AGSKPV-TRATRPPSSRPALPTKCAPRLKPTRCMVLNGAPVTLLRNVKNCPKPRPTAGT 610
           A S+PV  R++ P  +RP+ PTK  P          N    +      +    RP+  T
Sbjct: 128 AASRPVPARSSTPVKTRPSTPTKTRPSTPVRTRQTANSTSDSAAARTTSAQNSRPSTPT 186


>04_04_1129 - 31107892-31110246
          Length = 784

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = +2

Query: 545 GAPVTLLRNVKNCPKPRPTAGTPLAAVA*SDRASLLQSKTITFTSDLPR*ASLMVGLMSV 724
           GA  T+L      P PRP A   LAA+A   R+    S  ++     P  A L++   S+
Sbjct: 69  GADATILSGSSAHPLPRPAAAARLAALALRFRSGPSLSAALSALPSQPDPALLLLAASSL 128


>04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787
          Length = 345

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 408 RLNARDGVYVEAIHTDGSTTGLGIGSAV 325
           R+++ DG YV+A     + TG G+G  V
Sbjct: 60  RMSSHDGSYVDAFVVGEAITGYGVGKVV 87


>03_01_0640 -
           4683970-4684481,4685197-4685343,4685606-4686764,
           4686851-4686907
          Length = 624

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -1

Query: 243 ELFASTVTRNHLVGNQCSNMLQVSSNSCRGN--RLNMGNDDLRKSGSGL 103
           +L  + +T    +G   +N   + + +  GN  + N+G+D LRKS SGL
Sbjct: 488 DLSFNKITTTKALGQLVANYSSLRALNLVGNPVQTNIGDDALRKSASGL 536


>02_05_0916 -
           32706039-32706332,32707483-32708103,32708450-32709070,
           32709183-32709752,32709840-32709918,32710002-32710075,
           32711336-32711398
          Length = 773

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -1

Query: 228 TVTRNHLVGNQCSNMLQVSSNSC---RGNRLNMGNDDLRKSG 112
           TVT ++     CS+ L+V   SC   RG R+  GN  L + G
Sbjct: 696 TVTGSNTSATTCSSYLRVPGCSCNCKRGKRVRRGNRRLGEKG 737


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,020,300
Number of Sequences: 37544
Number of extensions: 586456
Number of successful extensions: 2064
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2061
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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