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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a04r
         (797 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442...    32   0.61 
02_04_0144 - 20177136-20177231,20177525-20178010,20178103-20178162     31   1.4  
02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313...    31   1.4  
01_05_0671 - 24164490-24164544,24164920-24165086,24165787-241659...    30   1.9  
01_05_0302 + 20637139-20637291,20637390-20637476,20637609-206378...    29   3.2  
12_01_0894 - 8661025-8661147,8661701-8661769,8661798-8661800           29   4.3  
11_01_0058 + 438000-438230,438847-438902,440003-440117,440314-44...    29   4.3  
06_01_1145 - 9575173-9575553,9575712-9575858,9575971-9576024,957...    29   4.3  
12_01_0059 + 494876-494924,496060-496211,496344-496531,496971-49...    29   5.7  
01_05_0612 - 23652121-23652400,23653031-23654427                       29   5.7  
10_08_0108 + 14860469-14861032                                         28   7.5  
08_02_0526 + 18184146-18184168,18184247-18184438,18184846-181849...    28   7.5  
06_03_0739 + 24004629-24005219                                         28   7.5  
05_04_0069 - 17639386-17641380                                         28   7.5  
05_01_0570 + 5061600-5062142,5062790-5062972                           28   7.5  
02_04_0343 - 22166148-22166318,22166422-22166465,22166563-221666...    28   7.5  
10_08_0032 - 14288522-14290465                                         28   9.9  
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526...    28   9.9  
04_01_0450 - 5840015-5840055,5840635-5840977,5841326-5841537,584...    28   9.9  
02_04_0411 + 22670418-22670499,22670708-22671045                       28   9.9  

>10_08_0106 + 14842748-14843085,14843122-14843250,14844145-14844211,
            14847177-14847324,14847998-14848097,14848306-14848384,
            14848527-14848687,14848829-14848908,14849319-14849475,
            14849575-14849723,14849909-14850076,14850426-14850719,
            14851002-14851046,14851213-14851462,14851707-14851835,
            14852799-14853039,14853977-14854642
          Length = 1066

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +2

Query: 32   NGKRER*HQGSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRR 169
            + +RER HQ +  +     +SR +RG G  G  H +H G G   RR
Sbjct: 1024 SSRREREHQEAQEEPR---RSRERRGGGSDGNHHHNHGGGGGHKRR 1066


>02_04_0144 - 20177136-20177231,20177525-20178010,20178103-20178162
          Length = 213

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = +2

Query: 59  GSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKH 178
           G D  R  +P  R +RG G G E H    G G  H    H
Sbjct: 69  GDDDMRPRLPTERWRRGGGRGEERHTGGGGGGSHHAHYAH 108


>02_03_0351 +
           18030656-18030823,18030963-18031113,18031214-18031309,
           18032027-18032103,18032627-18032706,18033216-18033276,
           18034153-18034220,18034312-18034393,18034552-18034638,
           18035009-18035086,18035336-18035455,18035554-18035730
          Length = 414

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +3

Query: 177 TRAQHVSGDSTVNGSVTLDAGILIDGPDLDVTELLRIRPSERCSTPTSSPNNLVI 341
           TRA H SG+ST+ G++   +    D PD+D   L+        + P+ SP  + I
Sbjct: 132 TRALHFSGNSTIEGAINWLSEHQED-PDIDEPLLVPANTITEANKPSLSPEEMKI 185


>01_05_0671 -
           24164490-24164544,24164920-24165086,24165787-24165941,
           24166291-24166458,24167471-24167552
          Length = 208

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = -3

Query: 774 YAVYHYFVGPW-AC---CCGGCSYQPTKDYWWLHD---QH*PVSRYSC 652
           + +YH+  GPW  C   C GG  Y+    Y  L D   +H PV   SC
Sbjct: 83  HEIYHWVAGPWMKCSSPCDGGVRYRDVACYGNLSDATIKHYPVDDASC 130


>01_05_0302 +
           20637139-20637291,20637390-20637476,20637609-20637836,
           20638014-20638184,20638843-20638896,20639028-20639174,
           20639326-20639706
          Length = 406

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 716 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGN 600
           TNPQ +IGGS + ++ Y    +  Y +++  W    GGN
Sbjct: 251 TNPQFVIGGSLSPVSIY---GSTQYEYDYLVWKDPAGGN 286


>12_01_0894 - 8661025-8661147,8661701-8661769,8661798-8661800
          Length = 64

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +1

Query: 106 RTRLWRRGPPESPWHWSRPPTSKTPEHN 189
           R  LW    PE PW W +     +  HN
Sbjct: 33  RQGLWAYDNPEKPWEWRKNKRKASEHHN 60


>11_01_0058 +
           438000-438230,438847-438902,440003-440117,440314-440424,
           442331-442518,442957-443013,443109-443268,443368-443436,
           443580-443699
          Length = 368

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = +1

Query: 52  TPGKRRSAQYCPQEQTPTRTRLWRRGPPESPWHWSR 159
           T  KR       +E       LW  G PE PW W R
Sbjct: 320 TYDKRPEFARWEREARAANRGLWASGNPEKPWDWRR 355


>06_01_1145 -
           9575173-9575553,9575712-9575858,9575971-9576024,
           9576692-9576862,9577004-9577231,9577392-9577478,
           9577600-9577761
          Length = 409

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 716 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGN 600
           TNPQ +IGGS + ++ Y       Y +++  W    GGN
Sbjct: 254 TNPQFVIGGSISPVSTY---GDTQYEYDYLVWKDPAGGN 289


>12_01_0059 +
           494876-494924,496060-496211,496344-496531,496971-497027,
           497123-497282,497389-497457,497712-497837,497972-498091
          Length = 306

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 115 LWRRGPPESPWHWSR 159
           LW  G PE PW W R
Sbjct: 279 LWASGNPEKPWDWRR 293


>01_05_0612 - 23652121-23652400,23653031-23654427
          Length = 558

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -1

Query: 521 GSTFANSGGVVHNVNRII--IHPNYNRRTADSD 429
           G T A S      ++R++  +HPN NR+T DSD
Sbjct: 64  GITVAFSAAAPPAISRLLFALHPNKNRQTTDSD 96


>10_08_0108 + 14860469-14861032
          Length = 187

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 85  PQEQTPTRTRLWRRGPPESPWHWSR 159
           P+   P R R WRR    +PWH  R
Sbjct: 23  PRTTLPLRCRRWRRRRRLAPWHGGR 47


>08_02_0526 +
           18184146-18184168,18184247-18184438,18184846-18184954,
           18185071-18185220,18185973-18186136,18186273-18186359,
           18187083-18187137,18187911-18188333
          Length = 400

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = +1

Query: 22  QEVKRETRTLTPGKRRSAQYCPQEQTPTRTRLWRRGPPESPWHWSRPP----TSKTP 180
           +EV+   R++TP   R+     +  TP R    R  PP+     S PP    TS++P
Sbjct: 5   KEVRYTARSITPPADRNGTSKSKSPTPVRRSTSRSPPPKKSDSRSPPPRRRSTSRSP 61


>06_03_0739 + 24004629-24005219
          Length = 196

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 572 AAHCPYGDATGRWRIRVGSTFANSGGVVHNVNRIIIH 462
           AAH PY +   R+ +  G     +GG   +  RII H
Sbjct: 160 AAHTPYSECPSRFAVADGEGRVYAGGYAWSPRRIIRH 196


>05_04_0069 - 17639386-17641380
          Length = 664

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = -1

Query: 584 SILSAAHCPYGDATGRWRIRVGSTFANSGGVVHNV---NRIIIHPNYNRRTADSDLCILR 414
           S L AAH  +GDA G W +        S GV  NV   N ++   N + R  D+ L ++R
Sbjct: 90  SALIAAHASHGDAEGAWGL---LERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVR 146


>05_01_0570 + 5061600-5062142,5062790-5062972
          Length = 241

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 71  QRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 190
           +R+T  +SR   GRG G    R     G   RRP+ + TT
Sbjct: 142 RRATRARSRLSAGRGDGVGGARGRAVRGSARRRPRKEETT 181


>02_04_0343 -
           22166148-22166318,22166422-22166465,22166563-22166626,
           22166729-22167109,22167296-22167475,22167661-22167790,
           22167844-22167946,22168060-22168093,22168216-22168300,
           22168389-22168453,22168592-22168690,22168960-22169025,
           22169200-22169439
          Length = 553

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -1

Query: 344 GDNQVVWAAGWGATSLGGSNSEQLRHVQV-WTINQNACVQRYRPINRAITANMLCSGV 174
           GD +   AAGW A S   +  E+ R +Q   ++  +A    +R I R   A M+  G+
Sbjct: 7   GDREGKSAAGWTALSTTKTTLEEKRRLQANGSVGGDAGTSGFRRIVRLFFACMVAGGI 64


>10_08_0032 - 14288522-14290465
          Length = 647

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 527 RVGSTFANSGGVVH-NVNRIIIHPNYNRRTADSDLCILRSNSNIAY 393
           R+G   A++  ++  +VN+++IHP   R+  +  +  +     +AY
Sbjct: 465 RIGELVASNFSIIGVDVNQVVIHPRLGRKGYEMIIAFMNPEGMLAY 510


>08_01_0600 -
           5262573-5262773,5262850-5262952,5263050-5263180,
           5263263-5263312,5265266-5265725,5266349-5266708
          Length = 434

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +1

Query: 88  QEQTPTRTRLWRRGPPESPWHWSRPPTSKTPEH 186
           Q+  P   ++W + PP  P  W + P    P +
Sbjct: 34  QQYAPPPPQMWGQAPPPPPQMWGQAPPPPQPAY 66


>04_01_0450 -
           5840015-5840055,5840635-5840977,5841326-5841537,
           5842381-5842477
          Length = 230

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 26  R*NGKRER*HQGSDGQRSTVPKSRHQRGRGCGGEDHR-SHPGTG 154
           R +G+R R  QG D   +   + +   G G  GE+HR S  G G
Sbjct: 11  RGDGRRLRSGQGGDASDTDSDEEQMWHGHGAWGEEHRDSKDGKG 54


>02_04_0411 + 22670418-22670499,22670708-22671045
          Length = 139

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 16/33 (48%), Positives = 16/33 (48%)
 Frame = -1

Query: 164 GGRDQCQGDSGGPLLHNRVLVGVCSWGQYCADR 66
           GG D   GD GGP  H R   G C  G Y  DR
Sbjct: 96  GGGDD--GDCGGPCEHRRCEYGCCE-GGYGGDR 125


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,331,335
Number of Sequences: 37544
Number of extensions: 600680
Number of successful extensions: 1967
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1966
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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