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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0002
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760...    87   2e-17
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467...    84   2e-16
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604...    82   6e-16
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886...    79   6e-15
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653...    59   5e-09
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009...    35   0.071
04_03_0243 - 13271384-13272865,13272987-13273248,13274617-13276067     31   0.87 
03_05_1084 - 30252933-30253019,30253107-30253226,30253498-302535...    29   6.2  
10_06_0127 - 11027692-11027826,11027925-11027993,11029925-110300...    28   8.1  

>02_05_0373 +
           28374298-28374380,28375126-28375303,28375975-28376065,
           28376162-28376256,28376379-28376468,28376789-28376837,
           28376941-28377079,28377224-28377340,28377437-28377527,
           28377604-28377746,28378009-28378123,28378439-28378483,
           28378565-28378645
          Length = 438

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
 Frame = +1

Query: 280 PVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFG-KISEENIKNN 456
           PV  I   SF +++ +N+++  V   N N A  F+F+++ + + +SYFG    E+ I+NN
Sbjct: 49  PVRQIGGCSFLYMRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNN 108

Query: 457 FVLIYELLDEILDFGYPRILILGS*RHSSLQQGIKS--ASKEEQAQI---TSQVTGQI 615
           FVLIYELLDEI+DFGYP+ L     +    Q+G++S  +SK     +   T QVTG +
Sbjct: 109 FVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAV 166



 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 18/38 (47%), Positives = 28/38 (73%)
 Frame = +2

Query: 140 PTMIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV 253
           P     ++  N +G+VLI+R+YRDD+G N VDAFR+++
Sbjct: 2   PVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRMHI 39



 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/78 (23%), Positives = 37/78 (47%)
 Frame = +2

Query: 557 SSLPPRRNKPRLPHK*LVRLXWRREGIKYRRNELFP*CTXVCQLXDVTARSKCSLXHVGW 736
           SS P  +  P    +    + WRREG+ Y++NE+F     + +  ++   SK S+     
Sbjct: 147 SSKPSDKPVPNATLQVTGAVGWRREGLMYKKNEVF---LDIVESVNLLMSSKGSVLRCDV 203

Query: 737 EKWVMKVIIVPGLPECQV 790
              ++    + G+P+ ++
Sbjct: 204 TGKILMKCFLSGMPDLKL 221


>05_06_0262 -
           26746180-26746278,26746371-26746493,26746584-26746725,
           26746824-26746921,26747012-26747108,26747215-26747322,
           26747900-26748003,26748170-26748268,26748373-26748435,
           26748538-26748687,26748769-26748900
          Length = 404

 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 36/82 (43%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
 Frame = +1

Query: 268 QVRSPVTNI-ARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEEN 444
           +V SPV +  A  S+  I+  N++L   ++QN NAA +  FL +++DV + YF ++ EE+
Sbjct: 48  EVLSPVVHDDAGVSYMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEES 107

Query: 445 IKNNFVLIYELLDEILDFGYPR 510
           +++NFV++YELLDE++DFGYP+
Sbjct: 108 LRDNFVVVYELLDEMMDFGYPQ 129


>01_06_0412 +
           29159918-29160046,29160148-29160297,29160385-29160447,
           29160540-29160716,29160796-29160899,29162142-29162249,
           29162336-29162432,29162540-29162637,29162718-29162859,
           29162941-29163063,29163161-29163259
          Length = 429

 Score = 81.8 bits (193), Expect = 6e-16
 Identities = 34/82 (41%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
 Frame = +1

Query: 268 QVRSPVT-NIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEEN 444
           +  SPV  + A  ++  I+  N++L   ++QN NAA +  FL +++DV + YF ++ EE+
Sbjct: 47  EAHSPVVYDDAGVTYMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEES 106

Query: 445 IKNNFVLIYELLDEILDFGYPR 510
           +++NFV++YELLDE++DFGYP+
Sbjct: 107 LRDNFVVVYELLDEMMDFGYPQ 128



 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +2

Query: 620 WRREGIKYRRNELFP*CTXVCQLXDVTARSKCSLXHVGWEKWVMKVIIVPGLPECQV 790
           WR EGI+Y++NE+F     V +  ++   S   +        +     + G+PEC++
Sbjct: 162 WRSEGIRYKKNEVF---LDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKL 215


>07_03_1297 +
           25587445-25587502,25587646-25587740,25588426-25588629,
           25588843-25588959,25589084-25589212,25589591-25589717,
           25590174-25590277,25590369-25590473,25590969-25591190,
           25591869-25591967
          Length = 419

 Score = 78.6 bits (185), Expect = 6e-15
 Identities = 30/77 (38%), Positives = 53/77 (68%)
 Frame = +1

Query: 280 PVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNF 459
           PV N+   ++ H+K A ++    T  NV+ +++ E L +I  V + Y G ++E++++ NF
Sbjct: 49  PVFNVDGVNYIHVKVAGLFFVVTTMVNVSPSLLLELLQRIARVTKDYLGVLNEDSLRKNF 108

Query: 460 VLIYELLDEILDFGYPR 510
           +L+YELLDE++DFGYP+
Sbjct: 109 ILVYELLDEVIDFGYPQ 125


>05_04_0141 -
           18364065-18364176,18364722-18364948,18365183-18365390,
           18365497-18365706,18366078-18366180,18366214-18366325,
           18367061-18367204,18367835-18367936,18368081-18368186,
           18368301-18368335
          Length = 452

 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 23/50 (46%), Positives = 38/50 (76%)
 Frame = +1

Query: 358 NVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYP 507
           +VN    F+FL ++ DV+  Y G ++E+ IK+NFVL+Y++LDE++D G+P
Sbjct: 91  SVNMICDFQFLSRVADVLTDYLGDLNEDIIKDNFVLVYQILDEMMDNGFP 140


>03_06_0198 -
           32299480-32299643,32300084-32300126,32300843-32300929,
           32301063-32301098,32301187-32301295,32301408-32301499,
           32302029-32302115,32303887-32304222
          Length = 317

 Score = 35.1 bits (77), Expect = 0.071
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 325 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFG 501
           A+++         N   V E +   ++V+  YFG + E ++  NF   Y +LDEIL  G
Sbjct: 174 ASLYFCMCIDAEDNELEVLEIIHHFVEVLDRYFGSVCELDLIFNFHKAYYILDEILIAG 232


>04_03_0243 - 13271384-13272865,13272987-13273248,13274617-13276067
          Length = 1064

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 268  AGEHGHIHSE-CVHSITTNIISVDSRDQHLAFMVVNEQAS 152
            +GEHGH H    + SI T ++++D  D H A   V E+ S
Sbjct: 943  SGEHGHSHHRLLLESIATRVVTLDG-DHHGAAAAVRERLS 981


>03_05_1084 -
           30252933-30253019,30253107-30253226,30253498-30253527,
           30253608-30253652,30253807-30253851,30253927-30254154,
           30254599-30254673,30255426-30255547,30256429-30256543,
           30257493-30257750
          Length = 374

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = -2

Query: 537 MSSGPQYQNSRVTKVQDLIKQLIDQNKVILDV-LFRNLA 424
           + SG    N+RV KV+D ++QL+D +  + D+ L R LA
Sbjct: 177 LKSGMTRLNARVQKVRDELEQLLDDDDDMADLYLSRKLA 215


>10_06_0127 -
           11027692-11027826,11027925-11027993,11029925-11030011,
           11030146-11030286
          Length = 143

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/56 (19%), Positives = 30/56 (53%)
 Frame = +1

Query: 325 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEIL 492
           A+++       + N   + EF+  +++ M  +FG + E +I  +   ++ +L+E++
Sbjct: 64  ASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMV 119


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,235,034
Number of Sequences: 37544
Number of extensions: 478289
Number of successful extensions: 1079
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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