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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0009
         (535 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1013 - 7931756-7935109                                           31   0.44 
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309...    31   0.58 
06_01_0350 + 2534422-2535615                                           31   0.77 
07_01_0523 - 3879550-3880134,3880313-3880491,3881519-3882383           29   2.4  
12_02_0969 - 24936399-24936699,24936779-24936949,24937032-249378...    29   3.1  
06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199...    29   3.1  
02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921...    29   3.1  
05_06_0098 + 25560158-25560925                                         28   4.1  
12_02_0854 + 23697826-23698033,23699111-23699276,23699430-236994...    28   5.4  
12_02_0096 - 13573612-13573632,13573846-13573884,13574160-135744...    28   5.4  
12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729...    28   5.4  
05_04_0162 + 18645459-18645827,18645934-18646149,18646224-186462...    28   5.4  
01_05_0408 + 21888898-21890181,21891289-21891984,21892167-21893705     28   5.4  
04_04_0759 - 27832340-27832480,27832568-27832593,27832759-27834154     27   7.2  
04_03_0211 - 12694217-12694318,12695119-12695256,12695470-12695628     27   7.2  
12_01_1093 - 11374087-11374140,11374337-11374438,11375793-113758...    27   9.5  
12_01_0801 + 7351171-7351198,7351383-7352020,7352098-7352559,735...    27   9.5  
09_04_0618 + 18988614-18989102,18989913-18990314,18990555-189908...    27   9.5  
06_03_0262 + 18905352-18905481,18905570-18906003,18906082-189063...    27   9.5  
06_02_0270 - 13613853-13614153,13614233-13614403,13614486-136153...    27   9.5  
03_06_0285 + 32848085-32848988,32849057-32849245,32850136-328503...    27   9.5  
03_05_0088 + 20664580-20664696,20664796-20665218,20665297-206655...    27   9.5  
02_03_0337 + 17898732-17899370,17899516-17899977,17900058-179006...    27   9.5  

>06_01_1013 - 7931756-7935109
          Length = 1117

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -3

Query: 299 GYEPARHLHVHPSPEFQGPQRVSGHR 222
           G+EP R + +HP+P+ + P R+ G +
Sbjct: 879 GWEPKRFITIHPTPKSKAPARILGSK 904


>03_04_0090 +
           17228253-17228403,17229062-17229129,17229238-17230902,
           17231002-17231143,17231648-17232399
          Length = 925

 Score = 31.1 bits (67), Expect = 0.58
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
 Frame = -2

Query: 474 TNIDQTRH------RTHPLPVQTRHAPVLRANP 394
           T IDQ  H      + H +PVQ  H+PVL+ NP
Sbjct: 324 TQIDQPSHCQRIKNQDHSVPVQKNHSPVLKTNP 356


>06_01_0350 + 2534422-2535615
          Length = 397

 Score = 30.7 bits (66), Expect = 0.77
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 169 PWNSNAQAEKKTLPGPLGGVFRP 101
           PW S+A+ E+K LP PL  +F P
Sbjct: 42  PWRSSARLERKLLPPPLPWLFLP 64


>07_01_0523 - 3879550-3880134,3880313-3880491,3881519-3882383
          Length = 542

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 23  PEPVIGTVSIIVPSSLKTSVRRGNPKWPEDAAERSG 130
           P+P IG   ++VP + +   R    +W E AAER G
Sbjct: 196 PDPEIGAARLLVPRAARERARGMAREWKE-AAERKG 230


>12_02_0969 -
           24936399-24936699,24936779-24936949,24937032-24937852,
           24937946-24938407,24938486-24938890
          Length = 719

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 272 VHPSPEFQGPQRVSGHRRKCGALRVP 195
           VHP+P  Q     S HR  C ++ VP
Sbjct: 248 VHPTPRAQHDTNPSHHRSSCASIEVP 273


>06_01_0268 +
           1989069-1989293,1989938-1990020,1990136-1990357,
           1990434-1990621,1990711-1990835,1990988-1991039,
           1991585-1991874,1992229-1992307,1992527-1992657
          Length = 464

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 438 LPVQTRHAPVLRANPYSEVTDPICRLPXPTLFYRLEAL 325
           +P Q + A  + A+P + V    C LP P+LF  L  L
Sbjct: 292 IPYQFQEATSILASPLAHVPASSCPLPAPSLFSSLPLL 329


>02_02_0346 -
           9214365-9214583,9214830-9214919,9215012-9215177,
           9215601-9215911,9215944-9216566,9216779-9216968,
           9217096-9217197,9217285-9217425,9217815-9218411,
           9219126-9219286,9220709-9220824,9221538-9221654,
           9221746-9221808,9221879-9221949
          Length = 988

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 21/61 (34%), Positives = 26/61 (42%)
 Frame = -2

Query: 234 IRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGT 55
           I+  P M  S   +  +   GFHG   L+   KL PDL +    HF      LVF   G 
Sbjct: 188 IKLYPHM--SGEQKRLIEGAGFHGLVDLKCS-KLRPDLCSWLMEHFNPATNQLVFPGRGA 244

Query: 54  I 52
           I
Sbjct: 245 I 245


>05_06_0098 + 25560158-25560925
          Length = 255

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = -2

Query: 453 HRTHPLPVQTRHAPVLRANPYSEVTDPICRLPXPTLFYRLEALHLGDLLRIWVRTGATSP 274
           HR  P P  +   P L  +P + V   I   P PT F + +      ++++   +  T P
Sbjct: 31  HRPPPPPPSSSSQPALPPSPRTVVPRTIDTTPFPTTFVQADTASFKQVVQMLTGSDTTPP 90


>12_02_0854 +
           23697826-23698033,23699111-23699276,23699430-23699466,
           23699531-23700145
          Length = 341

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = -3

Query: 476 ARTSTRPGTGRIRFPSKPDTPRSSE 402
           A TST PG GR R PS P TP  S+
Sbjct: 16  AATSTDPGRGRKRPPS-PSTPTPSD 39


>12_02_0096 -
           13573612-13573632,13573846-13573884,13574160-13574493,
           13574660-13574830,13574913-13575730,13575812-13576114,
           13576352-13577085,13577174-13577303
          Length = 849

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 272 VHPSPEFQGPQRVSGHRRKCGALRVP 195
           VHP+P  Q     S HR  C + +VP
Sbjct: 348 VHPTPRAQHDASPSQHRSSCASTKVP 373


>12_01_0796 +
           7292523-7292783,7292963-7293018,7295274-7295331,
           7295777-7295843,7296461-7296516,7296638-7296691,
           7296836-7296961
          Length = 225

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 444 HPLPVQTRHAPVLRANPYSEVTDPICRLP 358
           H L +  RH P L+A P S +    C+LP
Sbjct: 107 HSLIIPKRHFPSLQATPPSVIAAICCKLP 135


>05_04_0162 +
           18645459-18645827,18645934-18646149,18646224-18646278,
           18646545-18646672,18647134-18647217,18648742-18648867,
           18648949-18649086
          Length = 371

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -3

Query: 464 TRPGTGRIRFPSKPDTPRSSEPILIPKLR 378
           TRP TG+   P K D  RS   + I KLR
Sbjct: 108 TRPRTGKAALPLKRDRTRSKRFLEIQKLR 136


>01_05_0408 + 21888898-21890181,21891289-21891984,21892167-21893705
          Length = 1172

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -3

Query: 290 PARHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELER 153
           P+ H  +H S     P+R    RR+CGAL +    +   D + + R
Sbjct: 18  PSHHRLLHRSSLLPFPRRHHHRRRRCGALSIARASASAKDGVTVRR 63


>04_04_0759 - 27832340-27832480,27832568-27832593,27832759-27834154
          Length = 520

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 305 GYGYEPARHLHVHPSPEFQGPQRVSGHRRKCGALRVP 195
           G+ +EP   L  HPSP+  GPQ ++      G    P
Sbjct: 23  GFRFEPKEELVEHPSPQ-PGPQAIASIASSDGEFSSP 58


>04_03_0211 - 12694217-12694318,12695119-12695256,12695470-12695628
          Length = 132

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -2

Query: 330 ALHLGDLLRIWVRTGATSPRTSLT*ISRSAESIRTPPQMRCSSRSEP 190
           A H G    I VRT   +  TS +     A SI TP  + CS+ + P
Sbjct: 38  ARHTGPRSHIAVRTCHVNDETSRSTCRNGATSIATPSVVACSALALP 84


>12_01_1093 -
           11374087-11374140,11374337-11374438,11375793-11375873,
           11376005-11376343
          Length = 191

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 416 ACRVWTGSGCVRCRVWSMFVR 478
           ACR    SGC+ CR W   +R
Sbjct: 51  ACRGRVASGCLACRRWEHLLR 71


>12_01_0801 +
           7351171-7351198,7351383-7352020,7352098-7352559,
           7352641-7353105
          Length = 530

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 272 VHPSPEFQGPQRVSGHRRKCGALRVP 195
           VHP+P  Q     S HR  C +  VP
Sbjct: 335 VHPTPRAQHDASPSQHRSSCASTEVP 360


>09_04_0618 +
           18988614-18989102,18989913-18990314,18990555-18990806,
           18991564-18991941,18992350-18992426,18992700-18992808,
           18993424-18993574,18993810-18993903,18997072-18997474,
           18997590-18997742,18998115-18998474
          Length = 955

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +1

Query: 373 WIRNFGIRIGSEDRGVSGLDGKRMRPVPGLVDVRALCSF*RVSILNNAASKTV 531
           W R  G R+G ++       G+  R VPG+V  R L +  +V  +     KTV
Sbjct: 84  WERVVGHRVGGDEAA-----GEEEREVPGVVGCRMLAASGQVGCVLGKGGKTV 131


>06_03_0262 +
           18905352-18905481,18905570-18906003,18906082-18906303,
           18906381-18906842,18906935-18907755,18907838-18908008,
           18908088-18908347,18908453-18908508,18908786-18908824,
           18909711-18909764
          Length = 882

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 272 VHPSPEFQGPQRVSGHRRKCGALRVP 195
           VHP+P  Q     S HR  C +  VP
Sbjct: 375 VHPTPRAQHDASPSQHRSSCSSTEVP 400


>06_02_0270 -
           13613853-13614153,13614233-13614403,13614486-13615318,
           13615401-13615746,13615940-13616127,13616238-13616408
          Length = 669

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 272 VHPSPEFQGPQRVSGHRRKCGALRVP 195
           VHP+P  Q     S HR  C +  VP
Sbjct: 194 VHPTPRAQHDTSPSQHRSSCASTEVP 219


>03_06_0285 +
           32848085-32848988,32849057-32849245,32850136-32850311,
           32850569-32851141
          Length = 613

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 23  PEPVIGTVSIIVPSSLKTSVRRGNPKWPEDAAERSG 130
           P+P IG    +VP + +   R    +W +DAAE+ G
Sbjct: 209 PDPEIGAARPMVPQAARERARGMAREW-KDAAEKKG 243


>03_05_0088 +
           20664580-20664696,20664796-20665218,20665297-20665518,
           20665597-20666058,20666140-20666300,20666422-20666973,
           20667056-20667125,20667141-20667226,20667306-20667673,
           20668002-20668018
          Length = 825

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 272 VHPSPEFQGPQRVSGHRRKCGALRVP 195
           VHP+P  Q     S HR  C +  VP
Sbjct: 367 VHPTPRAQHDASPSQHRSSCASTEVP 392


>02_03_0337 +
           17898732-17899370,17899516-17899977,17900058-17900688,
           17900819-17900888,17900971-17901141,17901221-17901479,
           17901918-17901956,17902900-17902914
          Length = 761

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 272 VHPSPEFQGPQRVSGHRRKCGALRVP 195
           VHP+P  Q     S HR  C +  VP
Sbjct: 326 VHPTPRAQHDASPSQHRSSCASTEVP 351


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,345,731
Number of Sequences: 37544
Number of extensions: 379756
Number of successful extensions: 1281
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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