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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20040
         (660 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0234 - 27739272-27739525,27739810-27739889,27740894-27741048     89   2e-18
01_01_1148 - 9113728-9113835,9113952-9114035,9114831-9114992,911...    83   1e-16
06_03_0811 + 24830496-24831194                                         77   2e-14
02_01_0691 - 5167260-5167937                                           72   4e-13
06_01_0861 + 6527279-6527582,6527619-6527719,6527817-6528042,652...    32   0.35 
05_01_0135 + 908803-909059,913133-913187,913499-914047,914140-91...    31   0.81 
06_03_0352 - 19802826-19803148,19803232-19803457,19803549-19803932     31   1.1  
01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592     30   1.4  
08_01_0627 + 5451140-5451839,5452635-5452662,5452730-5452786,545...    29   2.5  
06_03_0012 + 15383628-15383823,15383915-15384100,15384326-15385518     29   2.5  
11_06_0265 - 21788531-21789798,21789914-21789947                       29   3.3  
12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935...    29   4.3  
10_07_0115 - 13008835-13008877,13009117-13010621                       29   4.3  
02_04_0240 - 21194597-21194743,21195579-21195680,21195797-211958...    29   4.3  
01_06_0928 + 33085403-33089224                                         29   4.3  
02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,290...    28   5.7  
10_08_1007 - 22210263-22210400,22210506-22210547,22210626-222107...    28   7.6  
10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662...    28   7.6  

>01_06_0234 - 27739272-27739525,27739810-27739889,27740894-27741048
          Length = 162

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
 Frame = +2

Query: 224 GKEGCIICGAGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNT 403
           GK+  +    GAFTP CS  H+PG++  A++LK+ GV +I+ VSVNDP+VM AW   +  
Sbjct: 35  GKKVVLFGVPGAFTPTCSNQHVPGFINQAEQLKAKGVDDILLVSVNDPFVMKAWAKSYPE 94

Query: 404 KGKVRMLADPSGNFIKALDLGTNLPPLG-GFRSKRF 508
              V+ LAD  G + KAL L  +L   G G RS+RF
Sbjct: 95  NKHVKFLADGLGTYTKALGLELDLSEKGLGIRSRRF 130



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
 Frame = +3

Query: 132 MAPIKVGDQLPAADL--FE-DSPANKVNICELTAGKKVVLFAVP 254
           MAP+ VGD LP   L  F+ +    +V++  L AGKKVVLF VP
Sbjct: 1   MAPVAVGDTLPDGQLGWFDGEDKLQQVSVHGLAAGKKVVLFGVP 44


>01_01_1148 -
           9113728-9113835,9113952-9114035,9114831-9114992,
           9115120-9115224,9115584-9116216,9117412-9117496,
           9118426-9118520,9119083-9119241,9119968-9119997,
           9120100-9120306
          Length = 555

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 45/107 (42%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
 Frame = +2

Query: 224 GKEGCIICGAGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNT 403
           GK+  I    GA+T  CS+ H+P Y  N DKLK+ GV  ++CVSVNDPY +  W  +   
Sbjct: 70  GKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDPYALNGWAEKLQA 129

Query: 404 KGKVRMLADPSGNFIKALDLGTNL-PPLGGFRSKRFRWSSLTARSKI 541
           K  +    D  G+F K+LDL  +L   L G RS   RWS+     KI
Sbjct: 130 KDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRS--HRWSAFVDDGKI 174


>06_03_0811 + 24830496-24831194
          Length = 232

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
 Frame = +2

Query: 224 GKEGCIICGAGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNT 403
           GK+  +    GAFTP C++ H+PG+V  A +L++ GV  + CVSVND +VM AW      
Sbjct: 103 GKKVVLFAVPGAFTPTCTQKHVPGFVAKAGELRAKGVDAVACVSVNDAFVMRAWKESLGV 162

Query: 404 KGKVRMLADPSGNFIKALDLGTNL--PPLG-GFRSKRF 508
             +V +L+D +G   +A+ +  +L   P G G RS+R+
Sbjct: 163 GDEVLLLSDGNGELARAMGVELDLSDKPAGLGVRSRRY 200



 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
 Frame = +3

Query: 96  ASRRALHISQLSMAPIKVGDQLPAADL-FEDSPANK---VNICELTAGKKVVLFAVP-AP 260
           A RRA+  S  + A I VGD+LP A L + DSP  +   V + +LTAGKKVVLFAVP A 
Sbjct: 56  APRRAVSASAPAAATIAVGDKLPDATLSYFDSPDGELKTVTVRDLTAGKKVVLFAVPGAF 115

Query: 261 SPRDVLKH 284
           +P    KH
Sbjct: 116 TPTCTQKH 123


>02_01_0691 - 5167260-5167937
          Length = 225

 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
 Frame = +2

Query: 224 GKEGCIICGAGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNT 403
           G++  +    GAFTP CS+ HLPG+++ A +L + GV  I CVSVND +VM AW      
Sbjct: 95  GRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVNDAFVMRAWKESLGL 154

Query: 404 -KGKVRMLADPSGNFIKALDLGTNL--PPLG-GFRSKRF 508
               V +L+D +    +AL +  +L   P+G G RS+R+
Sbjct: 155 GDADVLLLSDGNLELTRALGVEMDLSDKPMGLGVRSRRY 193



 Score = 50.8 bits (116), Expect = 9e-07
 Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
 Frame = +3

Query: 72  GITAFTNRASRRALHISQLSMAPIKVGDQLPAADLFEDSPAN----KVNICELTAGKKVV 239
           G+ A   RA+RR+   +   +A I VGD+LP A L    PA+     V + ELTAG+K V
Sbjct: 40  GVRAAGARAARRSAASASTVVATIAVGDKLPDATLSYFDPADGELKTVTVAELTAGRKAV 99

Query: 240 LFAVP-APSPRDVLKH 284
           LFAVP A +P    KH
Sbjct: 100 LFAVPGAFTPTCSQKH 115


>06_01_0861 +
           6527279-6527582,6527619-6527719,6527817-6528042,
           6528132-6528475,6528624-6528989,6529080-6529347,
           6529479-6529696
          Length = 608

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +2

Query: 230 EGCIICGAGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAW-GAQHNT 403
           +GCI    G   P C   H+    +   K +S  V   V   +   YV+A W G+ H++
Sbjct: 135 QGCIGALDGTHIPACVPMHMQDRFRGRKKFQSQNVLAAVDFDLRFLYVLAGWEGSAHDS 193


>05_01_0135 +
           908803-909059,913133-913187,913499-914047,914140-914365,
           914446-914906
          Length = 515

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
 Frame = +2

Query: 230 EGCIICGAGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAW-GAQHNTK 406
           EGCI    G   P     H+    +   K  +  V   V   +   YV+A W G+ H++ 
Sbjct: 287 EGCIGALDGTHVPASVPAHMQDRFRGRKKSPTQNVLAAVDFDLRFIYVLAGWEGSAHDSH 346

Query: 407 GKVRMLADPSG 439
                L+ PSG
Sbjct: 347 VLQDALSRPSG 357


>06_03_0352 - 19802826-19803148,19803232-19803457,19803549-19803932
          Length = 310

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
 Frame = +2

Query: 230 EGCIICGAGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAW-GAQHNTK 406
           EGCI    G   P     H+    +    + +  V   V   +   Y++A W G+ H++ 
Sbjct: 128 EGCIGALDGTHVPATVPAHMQDRFRGRKTIPTQNVLAAVDFDLRFTYILAGWEGSAHDSH 187

Query: 407 GKVRMLADPSG 439
                L+ PSG
Sbjct: 188 VLQDALSRPSG 198


>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
          Length = 853

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 535 GPCCQR*PSEPFGAETSERRQIGAQVQSLDEVAAG 431
           G C  R P  P GAE ++ R   A+++SL+ V+ G
Sbjct: 508 GGCEHRAPRSPEGAEAADARLAVAEIKSLEPVSPG 542


>08_01_0627 +
           5451140-5451839,5452635-5452662,5452730-5452786,
           5453205-5453874
          Length = 484

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -1

Query: 273 HPGVKAPAPQIIQPSFPPSTHKYSPY*RENLRINQQQAADPRP 145
           +P    P PQ+  PSFP +T   S   R   R  +    DP+P
Sbjct: 26  NPPEPQPQPQLATPSFPTTTDTASRRRRRRRRRGRGNRHDPQP 68


>06_03_0012 + 15383628-15383823,15383915-15384100,15384326-15385518
          Length = 524

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 22/65 (33%), Positives = 29/65 (44%)
 Frame = +2

Query: 251 AGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLAD 430
           AGAF     K   P Y +  D L   GV E++  SV+ P +  A    HN    V  +A 
Sbjct: 178 AGAFDGNGEKKIRP-YARKDDFLLP-GVVEVIIKSVSSPAIAPACTRTHNVPAVVFSVAG 235

Query: 431 PSGNF 445
            + NF
Sbjct: 236 YTDNF 240


>11_06_0265 - 21788531-21789798,21789914-21789947
          Length = 433

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +2

Query: 221 GGKEGCIIC----GAGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWG 388
           G   GC++     G     P  + TH  G +Q +  + S+G  E+VC    D Y MA + 
Sbjct: 128 GADGGCVLVNPFSGEKVSLPSPTATHSCGAIQRSVPV-SNGDGEVVCTIHADEYAMALYK 186

Query: 389 A 391
           A
Sbjct: 187 A 187


>12_01_0945 +
           9351915-9351929,9352221-9352386,9352903-9353024,
           9353098-9353214,9356997-9357077,9357204-9357272,
           9357727-9357790,9357988-9358067,9358164-9358247,
           9358418-9358502,9359658-9359743,9359924-9360045,
           9360841-9360901,9360981-9361166,9363622-9363723,
           9363803-9363844,9363949-9364086
          Length = 539

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -3

Query: 349 AHYFSNSIRFQFICVLYVSRQVCFRTS--RGEGAGTANNTTFFPAVNSQIFTL 197
           AH+F N     +I   Y   QV   T    G GAG + +  F    +S +F +
Sbjct: 218 AHFFRNEFLLNYIIATYSKPQVSLLTGIVMGGGAGVSIHGRFRVVTDSTVFAM 270


>10_07_0115 - 13008835-13008877,13009117-13010621
          Length = 515

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
 Frame = -3

Query: 379 RHHIRVINRHAHYFSNSI----RFQFICVLYVSRQVCFRTSRGEGAGTANNTTFFPAVNS 212
           R HIR     A +F  ++    RF+ +     S  VCFR   G G G A N     AVN+
Sbjct: 395 RAHIRRHVAMAEWFERAVSADERFEVVAKRRFSL-VCFRLRGGGGGGDAMNRELLAAVNA 453


>02_04_0240 -
           21194597-21194743,21195579-21195680,21195797-21195875,
           21195921-21196043,21196135-21196193,21196453-21196974,
           21197434-21198177,21198426-21198506
          Length = 618

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = -1

Query: 591 LSAERTRQASAIGLHIQILDLAVNDDHRNLLERKPPSGGRLVPRSRAL 448
           +  + +++ S   +HI  +D   N ++RN LE K P   R+  + RAL
Sbjct: 269 MPTKSSKEPSTSVIHIPRIDSIRNSENRNSLELKDPFHKRVEMKLRAL 316


>01_06_0928 + 33085403-33089224
          Length = 1273

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 21/54 (38%), Positives = 28/54 (51%)
 Frame = -1

Query: 483  SGGRLVPRSRALMKLPLGSASIRTFPLVLC*APQAAITYGSLTDTHTISATPSD 322
            SG  LVP S  L +L L S SI    L LC     ++   SLT+  T++  PS+
Sbjct: 931  SGLPLVPPS-GLCELYLSSCSITDGALALCIGGLTSLRELSLTNIMTLTTLPSE 983


>02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,
            2907650-2907790,2907870-2908043,2908577-2908851,
            2909592-2909755,2910409-2910536,2910628-2910734,
            2911747-2911880,2912266-2912441,2912530-2914257,
            2915084-2915239,2915328-2915486,2915581-2915751,
            2915931-2916047,2916417-2916473,2916565-2916680,
            2916790-2916916,2917862-2917945
          Length = 2056

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +3

Query: 375  WRLGELSTTLKERCVC*PIPAATSSRLWTWAPICRRSEVSAPKGSD 512
            W+   +  ++K++     +PA+ S   W  AP+ + +E S  K SD
Sbjct: 1718 WKSAGVDDSVKDKESWGNVPASPSDSAWNAAPVSQGNESSDAKQSD 1763


>10_08_1007 -
           22210263-22210400,22210506-22210547,22210626-22210727,
           22212239-22212337,22212413-22212473,22213311-22213432,
           22217700-22217786,22217958-22218041,22218141-22218220,
           22218404-22218467,22218904-22218972,22219099-22219179,
           22219626-22219694,22220108-22220140
          Length = 376

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
 Frame = -3

Query: 349 AHYFSNSIRFQFICVLYVSRQVCFRTS--RGEGAGTANNTTFFPAVNSQIFTL 197
           AH+F N     +I   Y   QV   T    G GAG + +  F     S +F +
Sbjct: 112 AHFFRNEFLLNYIIATYNKPQVSLLTGIVMGGGAGVSIHGRFRVVTESTVFAM 164


>10_08_0894 - 21365629-21365766,21365849-21365950,21366042-21366284,
            21366685-21366813,21366999-21367103,21367196-21367387,
            21367486-21367639,21368148-21368209,21368291-21368437,
            21368517-21368564,21369091-21369228,21369305-21369451,
            21370579-21370665,21370754-21370861,21370941-21371041,
            21371870-21371996,21372820-21372936,21373029-21373106,
            21373240-21373284,21373637-21373756,21373838-21373964,
            21374033-21374253,21374347-21374529,21374772-21374924,
            21375051-21375146,21375226-21375331,21375410-21375492,
            21375576-21375728,21375819-21376058,21376367-21376414,
            21376782-21376928,21377007-21377115,21377200-21377345,
            21377715-21377809,21377944-21378049,21378177-21378368,
            21378456-21378686,21378772-21378866,21379426-21379529,
            21380040-21380284,21380300-21380347,21380376-21380480,
            21380630-21380767,21381458-21381649,21381738-21381914,
            21382001-21382129,21382203-21382316,21382407-21382746,
            21382836-21383064,21383155-21383455,21384311-21384358,
            21387963-21388355
          Length = 2493

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = -3

Query: 496  AETSERRQIGAQVQSLDEVAAGIG*HTHLSFSVVLSSPSRHHIRVINRHAHYFSNSIRFQ 317
            A+   + Q+  Q+++  E+   +  ++      +L +   + +R  N H HYFS  I + 
Sbjct: 2349 AQQMNQSQLDVQIETATELFRNLVMNSDTEGRYLLLNAIANQLRYPNNHTHYFSFIILYL 2408

Query: 316  F 314
            F
Sbjct: 2409 F 2409


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,087,712
Number of Sequences: 37544
Number of extensions: 495664
Number of successful extensions: 1293
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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