BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0008 (805 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_02_0205 + 6389343-6389609,6390418-6390486,6390662-6390757,639... 29 3.3 12_02_1271 + 27472457-27473030,27473122-27473197,27473277-274733... 29 4.3 03_06_0282 - 32824950-32825135,32825247-32825505,32825651-328259... 28 10.0 >03_02_0205 + 6389343-6389609,6390418-6390486,6390662-6390757, 6391120-6391244,6391331-6391483,6392863-6392992, 6393122-6393282,6393660-6393702,6393869-6394042, 6394471-6394525,6394567-6394746,6396234-6396339, 6396448-6396506,6397419-6397541,6397825-6397919 Length = 611 Score = 29.5 bits (63), Expect = 3.3 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = +2 Query: 635 TI*VDWSVVNELPTSL*HHYDSLQHANIFVKIYLNLT*VISS 760 TI V + + L T++ H+D + A +F +IYL L V+SS Sbjct: 539 TINVPRVIDSNLDTAIVPHFDHCESAILFYEIYLRLAEVLSS 580 >12_02_1271 + 27472457-27473030,27473122-27473197,27473277-27473392, 27473840-27474354 Length = 426 Score = 29.1 bits (62), Expect = 4.3 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +1 Query: 382 NIHIVMRNKKDTY*APTLVLPMFHDRQCPLYVRQAYLSASWD 507 N+H++ R TY PT+V H LY Q + WD Sbjct: 135 NVHVIQRANLVTYRGPTMVANTLHAAAAFLYTNQ-HPHLEWD 175 >03_06_0282 - 32824950-32825135,32825247-32825505,32825651-32825901, 32826309-32826425,32826613-32826687,32826788-32827009, 32827396-32827509,32827694-32827801 Length = 443 Score = 27.9 bits (59), Expect = 10.0 Identities = 9/32 (28%), Positives = 18/32 (56%) Frame = +2 Query: 32 RQMLAMGFTNQGGWLVELLEKKDGNIAAVLDL 127 ++ + GF N G W +L+ + G + A+ D+ Sbjct: 207 QRFVIQGFGNVGSWAAQLISEAGGKVIAISDV 238 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,925,170 Number of Sequences: 37544 Number of extensions: 280728 Number of successful extensions: 584 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 574 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 584 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2185924824 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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