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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0046
         (423 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0047 + 7793337-7793969                                           32   0.17 
10_01_0311 + 3441911-3443035                                           29   1.2  
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769...    29   1.5  
10_08_0748 - 20277623-20277736,20277956-20279425                       28   2.7  
07_03_1460 - 26687630-26688310                                         28   2.7  
03_05_0893 + 28566436-28566501,28566624-28566903,28567002-285671...    28   2.7  
06_03_0813 - 24853119-24854480,24854711-24855442,24855556-248559...    28   3.6  
06_01_0696 + 5071555-5071922,5072252-5072333,5073969-5074070,507...    28   3.6  
02_01_0035 - 220036-221419,222050-222801                               28   3.6  
01_05_0213 - 19355785-19356522                                         28   3.6  
12_02_0763 + 22953749-22953884,22955036-22955199,22955695-229563...    27   4.7  
10_08_0206 + 15809261-15809390,15810655-15810763,15811237-158112...    27   4.7  
08_02_0928 - 22688277-22688648,22689378-22689443,22689543-226895...    27   4.7  
08_02_0038 + 11497286-11497876                                         27   4.7  
03_06_0278 - 32817707-32819167                                         27   4.7  
12_02_1215 + 27070164-27070302,27070308-27071098                       27   6.2  
08_02_0056 + 11751585-11751672,11751741-11752060,11755363-117554...    27   6.2  
06_01_1012 + 7926408-7927232                                           27   6.2  
01_01_0370 + 2895685-2895717,2895892-2896944                           27   6.2  
06_03_1001 + 26817231-26818246,26818341-26818525,26818614-268189...    27   8.2  
04_03_0801 - 19828175-19828770,19828913-19828994                       27   8.2  
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317           27   8.2  
01_06_0172 + 27214051-27214596                                         27   8.2  

>05_03_0047 + 7793337-7793969
          Length = 210

 Score = 32.3 bits (70), Expect = 0.17
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -1

Query: 339 DHAVQAQPCSRESPPLTASARP 274
           DHA  A+P S   PP TA+ARP
Sbjct: 24  DHAAAAEPMSSSPPPATATARP 45


>10_01_0311 + 3441911-3443035
          Length = 374

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 348 RRGDHAVQAQPCSRESPPLTASARPPHASSLAIHSTD 238
           R  D    AQ C     P  A+A PP A  +  HS+D
Sbjct: 177 RASDEPRHAQHCGAPGSPGLATAFPPFAEPIGAHSSD 213


>12_01_0831 -
           7688342-7688772,7690678-7692610,7693142-7693915,
           7694019-7694142,7696084-7696189,7696346-7696532
          Length = 1184

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +2

Query: 323 ACTAWSPRRQPAPHEILTPKPRRPSSGCR 409
           A T   PRR P+P   LTP  R PS   R
Sbjct: 196 AKTLTPPRRSPSPASTLTPPRRSPSPASR 224


>10_08_0748 - 20277623-20277736,20277956-20279425
          Length = 527

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = +2

Query: 233 ALSVECMASEDACGGRAEAVSGGDSREHGCACTAWSP-RRQPAPHE 367
           AL+ E    +D C  R  A+ G D R H C      P  R P  H+
Sbjct: 261 ALAEELAKMQDGCLHRYPALYGSDDRIHACMSELGVPLTRHPGFHQ 306


>07_03_1460 - 26687630-26688310
          Length = 226

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 236 LSVECMASEDACGGRAEAVSGGDSREHGC-ACTAWSPR 346
           L++     ++  GGR EA + GD RE GC    A SPR
Sbjct: 20  LAIAQARGKEEWGGRTEATTSGDRRE-GCPTAQAGSPR 56


>03_05_0893 +
           28566436-28566501,28566624-28566903,28567002-28567188,
           28567353-28567423,28567523-28567600,28567687-28567774,
           28567875-28567930,28568054-28568121
          Length = 297

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +2

Query: 248 CMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILTPKPR 388
           C     A    + + S   SR  G   T  +PRR P P  +LTP  R
Sbjct: 33  CAGEFSAIASASASASAAASRRAGIGGT--TPRRNPKPPRVLTPLRR 77


>06_03_0813 -
           24853119-24854480,24854711-24855442,24855556-24855962,
           24856091-24856359,24856681-24856733,24857019-24857078,
           24857309-24857363,24858080-24858155,24858225-24858801
          Length = 1196

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +2

Query: 254 ASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILTPKPR 388
           +SED  GG       G SR  G A    SP   P P  ++ P+ R
Sbjct: 619 SSEDTVGGSGSGSGRGSSRGGGGAREIMSPSPSPPP-VVVAPRKR 662


>06_01_0696 +
           5071555-5071922,5072252-5072333,5073969-5074070,
           5074191-5074247,5074576-5074719,5075175-5075245,
           5075363-5075468
          Length = 309

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +3

Query: 21  LKTFRTFHMIFERNPKTFLVNVL 89
           L  F+TF  +FERN  TFL  VL
Sbjct: 130 LNFFKTFGNLFERNDITFLFKVL 152


>02_01_0035 - 220036-221419,222050-222801
          Length = 711

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = -1

Query: 378 GVRISCGAGCRRGDHAVQAQPCSRESPPLTASARPPHASSLAIHSTDKAHTGTQ 217
           G +   G+G    D+A+ A P +    P  A+A PPH ++    + + AH   Q
Sbjct: 326 GPQTGSGSGLTGDDNAMLAPPMA--DLPDAAAANPPHLNTSETSAGEDAHAVVQ 377


>01_05_0213 - 19355785-19356522
          Length = 245

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 303 SPPLTASARPPHASSLAIHSTDKAHTGTQNCFSTS*KHTYTH 178
           SPP + +  PP  +S A H     HT T +C  TS    Y++
Sbjct: 35  SPPYSPAQSPPPPTSPAYHDDHADHT-TNSCTFTSAGGAYSY 75


>12_02_0763 +
           22953749-22953884,22955036-22955199,22955695-22956307,
           22968553-22968874,22969107-22969373,22969692-22970460
          Length = 756

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -1

Query: 351 CRRGDHAVQAQPCSRESPPLTA 286
           CR G H  +A P S ESPP TA
Sbjct: 171 CRTGRHRCRADP-SSESPPATA 191


>10_08_0206 +
           15809261-15809390,15810655-15810763,15811237-15811265,
           15811721-15813048
          Length = 531

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +2

Query: 236 LSVECMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEI 370
           + +E   SE A GGR  A     S      C    P  QP+P ++
Sbjct: 1   MDIEAPNSEVAAGGRRPAADHWRSAMDALICNCLRPPPQPSPADL 45


>08_02_0928 -
           22688277-22688648,22689378-22689443,22689543-22689591,
           22689677-22689684
          Length = 164

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 338 SPRRQPAPHEILTPKPRRPSSG 403
           +P R+PAP  +    PRRPS G
Sbjct: 121 APSRRPAPPSVELSMPRRPSVG 142


>08_02_0038 + 11497286-11497876
          Length = 196

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
 Frame = +2

Query: 200 DVEKQFCVPVCALSVECMASEDACGGRAEAVSGGDSREHGCACTAWSP--RRQPAPHEIL 373
           D E+   VPV A+ +   +S  + GG + +  G +        T+W     R P+P    
Sbjct: 92  DAEEAIPVPVVAMKLLSPSSSSSAGGDSSSAKGWNRN------TSWGTDVYRSPSPPNAS 145

Query: 374 TPKPRRPSSGCRLV 415
                +P SG RLV
Sbjct: 146 LDCIAQPKSGERLV 159


>03_06_0278 - 32817707-32819167
          Length = 486

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -1

Query: 357 AGCRRGDHAVQAQPCSRESPPLTASARPPHASSLAIHSTD 238
           +GC  GD    A+  +R    L   A PP  S+LAI   D
Sbjct: 82  SGCGDGDGDAAAEALARGLTLLVRLADPPAVSALAIRPAD 121


>12_02_1215 + 27070164-27070302,27070308-27071098
          Length = 309

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
 Frame = +2

Query: 299 GDSREHGCACTAWS---PRRQPAPHEILTPKPRR 391
           GD    GC C  WS    RR+P    ++T   RR
Sbjct: 147 GDGTAAGCGCGGWSRWQRRRRPFVEAVVTSAARR 180


>08_02_0056 +
           11751585-11751672,11751741-11752060,11755363-11755483,
           11755950-11756137,11756224-11756355,11756535-11756577,
           11757298-11757395
          Length = 329

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -1

Query: 393 GLLGFGV-RISCGAGCRRGDHAVQA 322
           GL+G  V R  CG GC  G+ AV A
Sbjct: 33  GLVGVAVWRCGCGGGCGGGEDAVAA 57


>06_01_1012 + 7926408-7927232
          Length = 274

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
 Frame = +2

Query: 221 VPVCALSVECMAS-EDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILTPKPRRPS 397
           V VC +SV    S   A GG  +       R H    T+ +    PA     +P  + PS
Sbjct: 167 VAVCGVSVPVPVSIAAAAGGECDDAKSEHRRRHHHKTTSAAKNANPAAAPPRSPAKKAPS 226

Query: 398 SG 403
            G
Sbjct: 227 GG 228


>01_01_0370 + 2895685-2895717,2895892-2896944
          Length = 361

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -1

Query: 372 RISCGAGCRRGDHAVQAQPCSRESPPLTASARPP 271
           R++  AG  R DH V A P   ESP L A A PP
Sbjct: 259 RLALPAGATR-DHPV-ANPFGPESPSLEAVALPP 290


>06_03_1001 +
           26817231-26818246,26818341-26818525,26818614-26818917,
           26819956-26820041,26820141-26820298,26820420-26820496,
           26820586-26820652
          Length = 630

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +2

Query: 251 MASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILTPKPRRPSSG 403
           MA     GGRA+ +    + +      A  P   PAP+  + P PR+   G
Sbjct: 295 MAQHGGAGGRAQGLDEQVTNKFASGKAA-DPPSYPAPNPGMMPAPRKKELG 344


>04_03_0801 - 19828175-19828770,19828913-19828994
          Length = 225

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 13/46 (28%), Positives = 16/46 (34%)
 Frame = +2

Query: 248 CMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILTPKP 385
           C    D CGG      GG+    G  C        P P + + P P
Sbjct: 161 CKCGVDGCGGGCSGGHGGECGGGGGGCKKPCCSPPPCPWQPVCPPP 206


>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
          Length = 291

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -1

Query: 303 SPPLTASARPPHASSLAIHSTDKA 232
           +PP ++SA PPH++++ + S   A
Sbjct: 52  TPPQSSSASPPHSAAIVVSSQTHA 75


>01_06_0172 + 27214051-27214596
          Length = 181

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 254 ASEDACGGRAEAVSGGDSREHGCACTAWSPR 346
           A+ D CGG+A A+ G   R  G     W  R
Sbjct: 18  AATDECGGKAAAMGGVKQRRGGGGGGGWVKR 48


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,623,852
Number of Sequences: 37544
Number of extensions: 207153
Number of successful extensions: 895
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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