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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a11
         (548 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0263 + 2136858-2137331                                          191   4e-49
12_01_0323 - 2459854-2460306                                          190   8e-49
11_01_0317 - 2365493-2365786,2365825-2365953                          152   2e-37
06_03_1161 - 28089177-28089359,28089473-28089700,28089776-280898...    29   3.2  
12_02_0996 - 25115643-25115708,25115869-25116107,25116484-251165...    28   5.6  
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132     28   5.6  
03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917...    27   7.5  
02_05_0082 + 25679089-25679253,25680998-25681030,25681758-25682579     27   7.5  

>01_01_0263 + 2136858-2137331
          Length = 157

 Score =  191 bits (465), Expect = 4e-49
 Identities = 93/137 (67%), Positives = 116/137 (84%)
 Frame = +2

Query: 53  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 232
           MK N +VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60

Query: 233 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 412
            YKG++ GKV+QVYR+++V+++ERI REK NG+T  VGIHPSK V+ KLK++KDRKAILD
Sbjct: 61  SYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILD 119

Query: 413 RRAKGRLAALGKDKGKY 463
           R+A+GR  A  K KGK+
Sbjct: 120 RKARGR--AADKAKGKF 134


>12_01_0323 - 2459854-2460306
          Length = 150

 Score =  190 bits (462), Expect = 8e-49
 Identities = 93/137 (67%), Positives = 115/137 (83%)
 Frame = +2

Query: 53  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 232
           MK N +VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSTELRHKYNVRSIPIRKDDEVQVVRG 60

Query: 233 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 412
            YKG++ GKV+QVYR+++V+++ERI REK NG+T  VGIHPSK V+ KLK++KDRKAILD
Sbjct: 61  SYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILD 119

Query: 413 RRAKGRLAALGKDKGKY 463
           R+A GR  A  K KGK+
Sbjct: 120 RKASGR--AADKAKGKF 134


>11_01_0317 - 2365493-2365786,2365825-2365953
          Length = 140

 Score =  152 bits (369), Expect = 2e-37
 Identities = 82/137 (59%), Positives = 102/137 (74%)
 Frame = +2

Query: 53  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 232
           MK N +VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+NV             VRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSTELRHKYNV-------------VRG 47

Query: 233 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 412
            YKG++ GKV+QVYR+++V+++ERI REK NG+T  VGIHPSK V+ KLK++KDRKAILD
Sbjct: 48  SYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILD 106

Query: 413 RRAKGRLAALGKDKGKY 463
           R+A GR  A  K KGK+
Sbjct: 107 RKASGR--AADKAKGKF 121


>06_03_1161 -
           28089177-28089359,28089473-28089700,28089776-28089814,
           28090681-28090737,28090924-28091046
          Length = 209

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
 Frame = +2

Query: 56  KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPI------RKDDEV 217
           +F  + ++S++    ++F     I+   +   L +  R+K    S+P+      R  D V
Sbjct: 42  EFRLRTSTSQQPTLCQNFVVKFMIKTCPIQMRLKRWERKKCKPNSLPVLHKMHVRIGDTV 101

Query: 218 QVVRGHYKGQQVGKVMQVYRKKFVVYIE 301
           QV+ G  KG +VG+V ++++    V ++
Sbjct: 102 QVIAGREKG-KVGEVTRLFKHNSTVIVK 128


>12_02_0996 -
           25115643-25115708,25115869-25116107,25116484-25116577,
           25116726-25116864,25116960-25117081,25117261-25117491,
           25117583-25117644,25118335-25118461,25118890-25119183,
           25119266-25119622
          Length = 576

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/65 (24%), Positives = 27/65 (41%)
 Frame = +1

Query: 292 IH*EDSKRKGQWCNSICRHSPFKVCDCQVEDE*RPQSNPRSQSKGQTGCTWQRQG*IHRG 471
           +H   S+ +G      C H+  K C C +  E + Q+  R  +  Q     ++   I R 
Sbjct: 463 LHENLSQVEGHDIALCCNHNYMKQCKCSIAQEPQLQARARQNAASQQSQLHEKGRQIDRS 522

Query: 472 NCHSH 486
             HS+
Sbjct: 523 AVHSN 527


>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
          Length = 5436

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
 Frame = +2

Query: 152  LSKELRQKFNVKS-MPIRKDDEVQVVRGHYKGQQVGKVMQ--VYRKKFVVYIERIQREKA 322
            L+ E+ ++ N KS +P  K+D   V  GH + + V +VMQ  +     +  IE +Q E++
Sbjct: 3846 LNDEVEEEKNDKSNIPKEKEDRFTV--GHTE-ESVHEVMQSVLVSDADLRSIETLQCEES 3902

Query: 323  NGATAYVGIHPSKCVIVK 376
            NG  +      S C+IV+
Sbjct: 3903 NGVKSTGDYLESGCIIVE 3920


>03_05_0697 + 26888791-26888861,26890468-26890579,26891561-26891757,
            26892215-26892266,26893530-26893795,26894007-26894229,
            26895154-26895327,26895408-26895485,26895566-26895817,
            26896138-26898204,26899477-26901322,26901474-26901574,
            26902179-26902535,26902681-26902799,26903558-26903559,
            26903630-26903662,26903709-26903841,26904285-26904537,
            26905688-26905912,26906401-26906466,26907373-26907471,
            26908528-26908545,26908546-26908893,26909878-26910354
          Length = 2522

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 161  ELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 307
            E   KF   + P  K D +Q+V  + + QQ    + V  K+F +YI  +
Sbjct: 1278 ETTWKFLATTNPYEKVDRLQIVSEYMEIQQTDGHVDVSAKEFKMYISSL 1326


>02_05_0082 + 25679089-25679253,25680998-25681030,25681758-25682579
          Length = 339

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 22/67 (32%), Positives = 34/67 (50%)
 Frame = -2

Query: 397 AVFIHLQLDNHTL*RVNADICCCTIGLFSLNPLNVYNKLFTIHLHHFANLLAFVVSTYNL 218
           A  + LQL   TL R  + +   T+  F  + LN  + LF + +H  ++ LAF   +YN 
Sbjct: 68  AAVVSLQLWTATLLRDASWVKILTVAYFFGSFLN--HNLF-LAIHELSHNLAFTTPSYNR 124

Query: 217 NFIVFAN 197
              +FAN
Sbjct: 125 WLGIFAN 131


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,809,463
Number of Sequences: 37544
Number of extensions: 294805
Number of successful extensions: 747
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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