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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0042
         (570 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0331 - 16738148-16738231,16738232-16738318,16738486-167385...    33   0.12 
10_08_1044 + 22532596-22533114,22533425-22533688,22533926-22534306     31   0.85 
02_05_1191 + 34856635-34856775,34856878-34856942,34857096-348571...    31   0.85 
03_02_0173 + 6138406-6138628,6139769-6139857,6139922-6140608,614...    29   2.0  
10_08_0573 + 18872720-18872781,18873261-18873610,18873917-188743...    29   2.6  
10_08_0809 - 20725858-20725950,20726375-20726545,20726895-207271...    28   6.0  
06_03_1047 - 27133869-27134345,27134444-27134701,27134841-271350...    27   8.0  
06_01_0273 + 2022479-2022592,2022830-2022973,2023524-2023601,202...    27   8.0  
02_01_0356 + 2563773-2563898,2564031-2564131,2564375-2564498,256...    27   8.0  
01_06_1675 + 39078774-39078890,39079607-39079723,39079950-390800...    27   8.0  

>09_04_0331 -
           16738148-16738231,16738232-16738318,16738486-16738582,
           16739139-16739176,16740140-16740196,16740487-16740964,
           16741199-16741203
          Length = 281

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
 Frame = +2

Query: 26  C*AGSSTMKVLIVLSCVLVAVLADDKYTDKYDKINLQEILENKRLLESYMDCVLGKGKCT 205
           C    S ++V++ L  +    L D+K    Y    + E L+ + LLE  + C LG G+ T
Sbjct: 144 CKTEHSKLQVVLSLLHLKARYLEDEKPLKSY-AYPMLENLDKEGLLEQLLHCGLGAGEVT 202

Query: 206 PEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYL-IKNELEIWK 340
              + +    Q+      +KC E    G   S   L + + L +W+
Sbjct: 203 ARVEGVGGAGQQCPSCAVDKCKELSMLGIRRSRGGLNLMDFLAVWE 248


>10_08_1044 + 22532596-22533114,22533425-22533688,22533926-22534306
          Length = 387

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 19/64 (29%), Positives = 34/64 (53%)
 Frame = +2

Query: 203 TPEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRK 382
           +P+ + LKD L   L   C++C    ++  ET+ D    NE ++++ L+ H D   K   
Sbjct: 254 SPQKEALKDDLTTTLVQQCQQCQRTIQRIIETAGD----NEAQLFEALSVH-DELEKVLS 308

Query: 383 KYED 394
           KY++
Sbjct: 309 KYKE 312


>02_05_1191 +
           34856635-34856775,34856878-34856942,34857096-34857165,
           34857499-34857570,34857668-34857871,34858793-34858866,
           34858965-34859048,34859582-34859669,34859763-34859844,
           34860178-34860251,34860474-34860581,34860683-34860747,
           34861317-34861430,34861644-34861743,34861840-34861893,
           34861972-34862067
          Length = 496

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 23/80 (28%), Positives = 31/80 (38%)
 Frame = +2

Query: 134 QEILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYL 313
           QE    K +++S  D VLG   C P+  E+   +  AL+ G  K T     G   S    
Sbjct: 416 QEKTVMKLVVDSETDKVLGASMCGPDAPEIIQGMAVALKCGATKATFDSTVGIHPS---- 471

Query: 314 IKNELEIWKELTAHFDPDGK 373
              E    + LT    P  K
Sbjct: 472 AAEEFVTMRTLTRRVSPSSK 491


>03_02_0173 +
           6138406-6138628,6139769-6139857,6139922-6140608,
           6140682-6140834,6140922-6141290
          Length = 506

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 101 KYTDKYDKINLQEILENKRLLESYMDCVLGKGK 199
           +++  YD  +L   L+   LLE+++ C+L KGK
Sbjct: 358 RFSRAYDYFSLVSFLDASPLLETFILCILQKGK 390


>10_08_0573 + 18872720-18872781,18873261-18873610,18873917-18874334,
            18875172-18877180,18877390-18877398,18880291-18880398,
            18880399-18880469,18880769-18881785
          Length = 1347

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 429  YSGMTMPLALARSSYFFLHLPSGSKW 352
            +SG++ P+++  S    +HLPSG +W
Sbjct: 1169 WSGLSSPISIILSKLPTVHLPSGPRW 1194


>10_08_0809 -
           20725858-20725950,20726375-20726545,20726895-20727101,
           20727208-20727879
          Length = 380

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 248 LELLEDDLSVPSLREYTCPCRARNPYTTP 162
           +EL++DD S   L E   P R   P TTP
Sbjct: 1   MELMDDDGSSSLLEELMAPLRRGTPTTTP 29


>06_03_1047 -
           27133869-27134345,27134444-27134701,27134841-27135041,
           27135242-27135584,27135674-27135732,27136256-27136581,
           27136753-27136849,27137072-27137182,27137691-27138305,
           27139578-27139880
          Length = 929

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +2

Query: 143 LENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQE 283
           +E+ RLL+SY + + G       G+E + H++    T C  CT A E
Sbjct: 25  MEDVRLLDSYDEEMGGGAAAAAAGEEEEAHVRVTGMT-CSACTSAVE 70


>06_01_0273 +
           2022479-2022592,2022830-2022973,2023524-2023601,
           2025361-2025585,2025684-2025782,2026177-2026235,
           2026351-2026501,2026590-2026754
          Length = 344

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 18/69 (26%), Positives = 32/69 (46%)
 Frame = +2

Query: 134 QEILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYL 313
           Q +++  R + +Y    LG G C    +EL     +ALE   +     + KG E  +D  
Sbjct: 233 QMVVQKCRKMTTYEKRKLGAGLCHLSPEELT----KALEMVAQDNPSFEAKGDELELDMD 288

Query: 314 IKNELEIWK 340
            ++E  +W+
Sbjct: 289 AQSETTLWR 297


>02_01_0356 +
           2563773-2563898,2564031-2564131,2564375-2564498,
           2564592-2564651,2564762-2564829,2565520-2565562,
           2566026-2566091,2566237-2566275,2566375-2566457,
           2566654-2566765,2566840-2566923,2567026-2567184,
           2567268-2567372,2567451-2567555,2567661-2567801,
           2567920-2568024,2568111-2568335,2568762-2568875,
           2568963-2569178,2569674-2569733,2569827-2569940,
           2570047-2570132,2570211-2570319,2570408-2570586,
           2570673-2570741,2570792-2571005
          Length = 968

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 8/118 (6%)
 Frame = +2

Query: 77  LVAVLADDKYTDKYDKINLQEILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETG 256
           L   + D+   D  DK  LQEI+ N +L E Y+   L +     E K  +D  +  L  G
Sbjct: 304 LAMEIDDEIAADGNDKEGLQEIVNNSKLSEGYL--TLARDIEVMEAKSPEDIYKVHLIDG 361

Query: 257 ---CEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFD-----PDGKWRKKYEDRAKA 406
                    A++  A T ++  +       K +TA  D       G W  K ++  KA
Sbjct: 362 RGASSSLDSARQNLAATFVNAFVNAGFGQDKLMTAPSDSSSSGASGNWLFKNKEHGKA 419


>01_06_1675 +
           39078774-39078890,39079607-39079723,39079950-39080006,
           39080340-39080417,39080553-39080597,39080872-39080931,
           39081149-39081271,39081850-39081927,39082056-39082125,
           39082612-39082719,39082962-39083095,39083177-39083247,
           39083384-39083432,39083507-39083557
          Length = 385

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 136 LQVNFVIFVSVLIISKYGHEYTAQNYKD 53
           L +NFV+ +S++IIS   H+Y +   KD
Sbjct: 312 LTINFVLAISIVIISM--HQYLSNQIKD 337


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,869,620
Number of Sequences: 37544
Number of extensions: 239002
Number of successful extensions: 697
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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