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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0031
         (485 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0759 + 6369149-6369231,6369765-6371556                           29   1.5  
06_03_1384 + 29786028-29786657,29788581-29788711,29788987-297890...    28   3.5  
04_04_0146 + 23106325-23108154                                         28   3.5  
09_04_0711 + 19666277-19666283,19666836-19666954,19667068-196672...    28   4.6  
07_03_0808 - 21668100-21669092                                         28   4.6  
06_01_1002 + 7796367-7796651,7796727-7797489,7797800-7797915           28   4.6  
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025...    27   6.0  
10_08_0367 - 17236838-17236852,17237051-17237152,17237246-17238283     27   8.0  
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535...    27   8.0  
02_05_0363 - 28297295-28298167                                         27   8.0  
02_03_0388 + 18429538-18430598,18430971-18431081,18431165-184312...    27   8.0  
01_05_0781 + 25140652-25142010                                         27   8.0  
01_04_0086 + 15916555-15916905,15917236-15917262                       27   8.0  

>11_01_0759 + 6369149-6369231,6369765-6371556
          Length = 624

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 330 GTTVAAVSESDTTSWPGAVAALDSLTVACEKDSMQV 437
           G T+  VS       PG     D +T+ CEK  M++
Sbjct: 423 GATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKM 458


>06_03_1384 +
           29786028-29786657,29788581-29788711,29788987-29789028,
           29789383-29789441,29789774-29790070,29790180-29790289,
           29790966-29791070,29791201-29791263,29791766-29791933,
           29792111-29792248
          Length = 580

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 349 YPSQIPRRGPAPSLPWTLSPSPARKT 426
           +PS  P  G +P LP  +SPSPAR T
Sbjct: 73  WPSPYPSGGASP-LPAGVSPSPARST 97


>04_04_0146 + 23106325-23108154
          Length = 609

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +1

Query: 352 PSQIPRRGPAPS-LPWTLSPSPARKTACKSPL 444
           P  +P + P PS  PW  +P P  + A   PL
Sbjct: 14  PPPVPAQAPPPSPRPWYAAPPPPPQAAAADPL 45


>09_04_0711 +
           19666277-19666283,19666836-19666954,19667068-19667277,
           19667362-19667510,19667588-19667759,19668323-19668415,
           19668522-19668661,19668752-19668851
          Length = 329

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 375 PGAVAALDSLTVACEKDSMQVTITLAKRDPEINSIYD 485
           PG  + L+SLT    K+ ++  ++  K DP +  I D
Sbjct: 114 PGMSSMLESLTSPSHKELLEERMSRIKEDPSLKGILD 150


>07_03_0808 - 21668100-21669092
          Length = 330

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 280 RCSRPRVPSKSXXXXXXXXXXXXYPSQIPRRGPAPSLPWTLSPSPA 417
           R  RPR P ++             PS  PRR P P  P + SP P+
Sbjct: 135 RARRPRRPRRARGHQHQPALRHLPPSTAPRRTPPP--PGSASPRPS 178


>06_01_1002 + 7796367-7796651,7796727-7797489,7797800-7797915
          Length = 387

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 318 TDLPGTTVAAVSESDTTSWPGAVAALD 398
           TD  GTT AA+  S+T +W G  A++D
Sbjct: 162 TDAAGTTYAALYSSETEAWSGP-ASID 187


>07_03_1500 +
           27001842-27002058,27002144-27002283,27002458-27002549,
           27002680-27002776,27002871-27002951,27003031-27003263,
           27003876-27004070,27004149-27004239,27004324-27004446,
           27004542-27004692,27005060-27005262
          Length = 540

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 18/59 (30%), Positives = 25/59 (42%)
 Frame = +3

Query: 255 MRCLLIISALLATARSKQIPLTDLPGTTVAAVSESDTTSWPGAVAALDSLTVACEKDSM 431
           M C ++IS  L    + Q    DL       + ESD     G V  +DS+  AC   S+
Sbjct: 262 MHCDILISTPLRLDHAVQKRDLDLSRVEYLVLDESDKLFELGFVEVIDSVVKACSNPSI 320


>10_08_0367 - 17236838-17236852,17237051-17237152,17237246-17238283
          Length = 384

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1

Query: 352 PSQIPRRGPAPSLPWTLSPSPARKT 426
           PSQI   G   + P+T+S SPARK+
Sbjct: 243 PSQIIGDGGLVAPPYTISSSPARKS 267


>06_03_0310 -
           19453047-19453160,19453240-19453338,19453441-19453513,
           19453598-19453708,19453795-19453956,19454064-19454340,
           19454542-19455160,19455256-19455471
          Length = 556

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 352 PSQIPRRGPAPSLPWTLSPSPARKTACKSP 441
           P+  P R P P+ P    P+P++  A ++P
Sbjct: 187 PAPTPPRAPTPTPPQAPLPAPSKSRASQAP 216


>02_05_0363 - 28297295-28298167
          Length = 290

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 391 PWTLSPSPARKTACK 435
           PW  SPSP R+T C+
Sbjct: 205 PWQPSPSPMRRTPCR 219


>02_03_0388 +
           18429538-18430598,18430971-18431081,18431165-18431237,
           18431513-18431695
          Length = 475

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 352 PSQIPRRGPAPSLPWTLSPSPARKTACKSP 441
           P+  P + PAP+ P    P+P++  A ++P
Sbjct: 103 PAMTPPQAPAPTPPQAPRPAPSKSRAPQAP 132


>01_05_0781 + 25140652-25142010
          Length = 452

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -1

Query: 452 RQCNGDLHAVFLAGDGERV 396
           R   GD+ AVFLA DG RV
Sbjct: 332 RSARGDVEAVFLAPDGVRV 350


>01_04_0086 + 15916555-15916905,15917236-15917262
          Length = 125

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 78  SSSVFPYTKQKTDTDYVYSSCAQRNVV 158
           +S+V  +  +K+D DY  +SCAQ  V+
Sbjct: 93  ASAVQSWVGEKSDYDYASNSCAQGKVI 119


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,799,293
Number of Sequences: 37544
Number of extensions: 254694
Number of successful extensions: 965
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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