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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0009
         (480 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592...   151   4e-37
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023...   115   2e-26
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559...    44   6e-05
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003...    43   1e-04
10_08_0965 + 21915842-21916906                                         30   0.85 
12_02_1080 - 25911521-25911922                                         29   1.5  
10_07_0170 - 13777590-13777973,13778073-13778339                       28   4.5  
09_02_0524 - 10207711-10208154,10208237-10208338,10208439-102085...    28   4.5  
07_01_0817 + 6533316-6533849,6533996-6534064,6534528-6534767,653...    28   4.5  
02_04_0160 - 20427774-20428217,20428301-20428402,20428503-204285...    28   4.5  
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492...    27   6.0  
12_02_1270 + 27466516-27466621,27466722-27466885,27467385-274681...    27   7.9  
02_01_0642 - 4803464-4805665,4806231-4806320                           27   7.9  

>02_01_0789 -
           5919271-5919411,5920105-5920215,5920303-5920401,
           5920486-5920642,5920774-5920937,5921017-5921079,
           5921153-5921377,5922038-5922135,5923283-5923499
          Length = 424

 Score =  151 bits (365), Expect = 4e-37
 Identities = 71/115 (61%), Positives = 88/115 (76%)
 Frame = +2

Query: 134 GEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEV 313
           GEG R YY+  I +LQL + +K+ NL RL+AQRN+LN++VRMLR         GSYVGEV
Sbjct: 34  GEGLRQYYLQHIHDLQLQIRQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEV 93

Query: 314 VKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKV 478
           VK M K KVLVKVHPEGK+VVD+DK++DI  +T + RVALRN+SY LH ILP+KV
Sbjct: 94  VKVMGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKV 148


>06_03_0668 +
           23301578-23301791,23302102-23302199,23302233-23302301,
           23302674-23302961,23303045-23303208,23303344-23303599,
           23303706-23303816,23304109-23304195,23305916-23305985,
           23306093-23306149,23306309-23306426,23307314-23307403,
           23307492-23307671,23307816-23307893,23308016-23308088
          Length = 650

 Score =  115 bits (276), Expect = 2e-26
 Identities = 66/139 (47%), Positives = 86/139 (61%), Gaps = 23/139 (16%)
 Frame = +2

Query: 131 KGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGE 310
           +G+G RPYY ++I +LQL + + + NL RL+AQRN LN++V  L          GSYVGE
Sbjct: 32  RGDGLRPYYQSRIHDLQLQIRQGTDNLSRLEAQRNVLNSQVITLGEELKVLHEPGSYVGE 91

Query: 311 VVKPMDKKKVLVK-----------------------VHPEGKFVVDLDKNVDINDVTANC 421
           VVK M K KVLVK                       VHPEGK+VVD+DK++DI  ++ + 
Sbjct: 92  VVKVMGKSKVLVKCCVLVFVHMSVALEIIGEDNILLVHPEGKYVVDVDKSIDITKLSPST 151

Query: 422 RVALRNESYTLHKILPNKV 478
           RVALRN+SY LH ILP+KV
Sbjct: 152 RVALRNDSYMLHLILPSKV 170


>02_01_0754 -
           5595813-5595887,5595973-5596071,5596136-5596327,
           5596992-5597129,5597415-5597501,5597583-5597669,
           5597795-5597956,5598089-5598225,5598483-5598602,
           5600668-5600773
          Length = 400

 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 20/62 (32%), Positives = 35/62 (56%)
 Frame = +2

Query: 293 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPN 472
           G  +GEV++P+D ++ +VK     ++VV     VD   +T+  RV L   + T+ + LP 
Sbjct: 61  GQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPR 120

Query: 473 KV 478
           +V
Sbjct: 121 EV 122


>06_03_0711 +
           23798998-23799106,23799838-23799957,23800181-23800317,
           23800418-23800579,23800707-23800793,23800872-23800958,
           23801317-23801454,23802023-23802214,23802287-23802385,
           23802490-23802564
          Length = 401

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 20/62 (32%), Positives = 34/62 (54%)
 Frame = +2

Query: 293 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPN 472
           G  +GEV++P+D ++ +VK     ++VV     VD   + A  RV L   + T+ + LP 
Sbjct: 62  GQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDKEKLIAGTRVVLDMTTLTIMRTLPR 121

Query: 473 KV 478
           +V
Sbjct: 122 EV 123


>10_08_0965 + 21915842-21916906
          Length = 354

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = +3

Query: 270 SFSSCKNRDRTSEKWLNQWIKRRSS*KFILKVNSSSI 380
           SFSS ++++R S +W ++W  R SS ++  + ++ ++
Sbjct: 275 SFSSARSQERWSNRWSSRWSSRWSSGRWSSRYDAGTV 311


>12_02_1080 - 25911521-25911922
          Length = 133

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 167 SWLCSTGENPHPSPCPLPF 111
           +W+CS GE+P P   P+P+
Sbjct: 18  TWICSGGESPRPLLIPVPY 36


>10_07_0170 - 13777590-13777973,13778073-13778339
          Length = 216

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +1

Query: 1   GGGHEGCFVLY 33
           GGGHEGCFV++
Sbjct: 142 GGGHEGCFVVW 152


>09_02_0524 -
           10207711-10208154,10208237-10208338,10208439-10208531,
           10208612-10208683,10208730-10208798,10208928-10209175,
           10209256-10209370
          Length = 380

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 167 IEELQLIVAEKSQNLRRLQAQRNELNAKVR 256
           +EE+Q +  E  Q    LQ+QR ELN++ R
Sbjct: 309 LEEVQKLTVENLQLKGELQSQREELNSQKR 338


>07_01_0817 +
           6533316-6533849,6533996-6534064,6534528-6534767,
           6537747-6537965,6538041-6538133,6538231-6538332,
           6538415-6538858
          Length = 566

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 167 IEELQLIVAEKSQNLRRLQAQRNELNAKVR 256
           +EE+Q +  E  Q    LQ+QR ELN++ R
Sbjct: 495 LEEVQKLTVENLQLKGELQSQREELNSQKR 524


>02_04_0160 -
           20427774-20428217,20428301-20428402,20428503-20428595,
           20428675-20428860,20428966-20429213,20429292-20429412,
           20430674-20430718,20431086-20431138,20431152-20431173
          Length = 437

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 167 IEELQLIVAEKSQNLRRLQAQRNELNAKVR 256
           +EE+Q +  E  Q    LQ+QR ELN++ R
Sbjct: 366 LEEVQKLTVENLQLKGELQSQREELNSQKR 395


>05_07_0093 - 27648656-27648736,27649034-27649147,27649229-27649288,
            27649464-27649687,27649799-27649886,27650326-27650532,
            27650566-27650784,27650903-27651001,27651439-27651504,
            27651654-27651737,27651829-27651888,27652041-27652325,
            27652789-27652836,27652988-27653034,27653442-27653556,
            27653958-27654032,27654227-27654298,27654944-27656124,
            27656613-27656757
          Length = 1089

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = +3

Query: 207  IFVVFKPSV-----MNSTLKFVCYARSFSSCKNRDRTSEKWLNQWIKRRSS 344
            +F +FKP++     +N  L  + Y+RSFS    RD   EK     +++ SS
Sbjct: 868  VFNLFKPTISYRSDINIELWNLSYSRSFSGFNKRDLEREKAARAELEKTSS 918


>12_02_1270 +
           27466516-27466621,27466722-27466885,27467385-27468173,
           27468263-27468479,27469078-27469256,27470233-27470474,
           27470607-27470994
          Length = 694

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 225 PSVMNSTLKFVCYARSFSSC 284
           P  +N TL F  YAR  SSC
Sbjct: 38  PVALNKTLAFCAYARGSSSC 57


>02_01_0642 - 4803464-4805665,4806231-4806320
          Length = 763

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 161 TKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 265
           +K+E +Q+ V EK   L   Q +  E+N++V  L+
Sbjct: 474 SKVESIQIAVQEKDSELSETQRRLAEVNSEVVELK 508


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,162,065
Number of Sequences: 37544
Number of extensions: 200080
Number of successful extensions: 482
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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