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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0088
         (518 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0066 - 11081446-11081544,11081639-11081846,11083122-110832...    46   2e-05
11_01_0088 - 662984-663024,663743-663774,664079-664503,665048-66...    29   2.2  
07_03_0698 - 20765305-20768526                                         29   2.2  
11_06_0265 - 21788531-21789798,21789914-21789947                       29   3.0  
01_06_0847 + 32411521-32411619,32411737-32411851,32412292-324123...    29   3.0  
01_01_0606 - 4503620-4504060                                           29   3.0  
09_06_0312 + 22235287-22235334,22235418-22235535,22235628-222356...    28   3.9  
09_01_0007 + 212984-213949                                             28   3.9  
09_01_0006 - 206409-207464                                             28   3.9  
08_02_1023 - 23710825-23710950,23711037-23711120,23711367-237114...    28   3.9  
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950...    28   3.9  
10_08_0445 + 17989438-17990895                                         28   5.2  
06_03_0726 + 23904350-23904964,23905986-23906021,23906158-239062...    28   5.2  
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815...    28   5.2  
06_03_0587 + 22555414-22557231                                         27   6.8  
05_07_0323 + 29260608-29260836,29262242-29262513,29263349-292634...    27   6.8  
01_06_1431 + 37317248-37317907                                         27   6.8  
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862...    27   9.0  
08_01_0626 - 5445676-5446687,5447099-5447430                           27   9.0  
07_03_0398 - 17690979-17690998,17691034-17691446,17691709-176917...    27   9.0  
06_01_0638 + 4640218-4640808                                           27   9.0  
01_03_0246 - 14207899-14208052,14208132-14208206,14208682-142088...    27   9.0  

>06_02_0066 -
           11081446-11081544,11081639-11081846,11083122-11083257,
           11083339-11083541,11083616-11083765,11083848-11083964,
           11084623-11085119
          Length = 469

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 28/115 (24%), Positives = 52/115 (45%)
 Frame = +3

Query: 129 LINIAYCFLAVFGFLIQRVVFGQLRVSEAQRVKDKFWNYVFYKFIFIFGVINVQYMDEVM 308
           L+N     + V   L++R+  G LR +E +R+ ++ W  V  + +F   +    +    +
Sbjct: 34  LLNTGLVAMCVAWQLVKRLFLGTLREAEVERLNEQAWREVV-EILFAVTIFRQDFSVSFL 92

Query: 309 LWCSWFTLVGFLHLMGQLCKDRFEYLASSPNTARWVHVRLVGLLLGILAASTALL 473
              +   LV  LH + Q    R EY+ ++P+     H R+V  +L +L      L
Sbjct: 93  AMVAALLLVKALHWLAQ---KRVEYIETTPSVPMLSHARIVSFMLFLLVVDCLFL 144


>11_01_0088 -
           662984-663024,663743-663774,664079-664503,665048-666006,
           666661-666846,666942-667044,667141-667323,667514-667606,
           668092-668274,669011-669031
          Length = 741

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 19/64 (29%), Positives = 26/64 (40%)
 Frame = -1

Query: 461 GGGQYTQE*TDQSNMHPTCCVGRRR*IFKPILAQLPHQVQEADESKPRTPQHHLVHVLNV 282
           G G Y        +  P+   GR +  F P   Q PH    AD S   TP   L H+ + 
Sbjct: 568 GTGTYFPNPNLSKDRSPSGRGGRGKTHFLPHNHQRPHHYGRADMSADLTPSEELRHIYDP 627

Query: 281 DYSE 270
           D ++
Sbjct: 628 DAND 631


>07_03_0698 - 20765305-20768526
          Length = 1073

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 370 SLHSCPIRCRKPTRVNQEHH 311
           SLH C IR R P R+ + HH
Sbjct: 920 SLHICSIRSRLPPRIKELHH 939


>11_06_0265 - 21788531-21789798,21789914-21789947
          Length = 433

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 397 PTQHVGCMFDWSVYSWVYWPPPQLYWALQSHGAC 498
           P Q +GC  DW V +W+    P LY  + + G C
Sbjct: 101 PGQCIGCFEDWLVCTWLRLSIP-LYPTVGADGGC 133


>01_06_0847 + 32411521-32411619,32411737-32411851,32412292-32412375,
            32412430-32413478,32414690-32416371,32416477-32416586,
            32417634-32418430,32418839-32418951,32419147-32419194,
            32419425-32419652,32419732-32419829,32419967-32420019
          Length = 1491

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 23/62 (37%), Positives = 30/62 (48%)
 Frame = +3

Query: 318  SWFTLVGFLHLMGQLCKDRFEYLASSPNTARWVHVRLVGLLLGILAASTALLGVAVAWGL 497
            SW  L   +H++G +C D+F  L+ S N      +RLV LLL     S  LL   V    
Sbjct: 1152 SWTLLA--IHIIGSMCGDKF--LSKSSNFL-MTTIRLVVLLLEAKNNSLCLLSSYVQSNR 1206

Query: 498  PA 503
            PA
Sbjct: 1207 PA 1208


>01_01_0606 - 4503620-4504060
          Length = 146

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 505 PAGKPHATATPNKAVEAASIPRSRPTSRTCTQR 407
           P G   A A   K + AAS+P + PT  + T+R
Sbjct: 70  PLGATPAPAPERKGMSAASLPGATPTPTSATER 102


>09_06_0312 +
           22235287-22235334,22235418-22235535,22235628-22235698,
           22235799-22235855,22236271-22236362,22236604-22236651,
           22237397-22237517,22237596-22237642,22237796-22237877,
           22238526-22238611,22238864-22238938,22239018-22239171
          Length = 332

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +3

Query: 324 FTLVGFLHLMGQLCKDRFEYLASSPNTARWVHVRLVGLLLGILAASTALLGVAVAWGLP 500
           F+ +G+L   G +   +    A  P+++R +H R  GLL  +L    + LGV + W  P
Sbjct: 21  FSYLGYLAAAGAVLPGKLVPGAVLPDSSR-LHYRCNGLLSLLLLLVLSALGVYMGWMSP 78


>09_01_0007 + 212984-213949
          Length = 321

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +1

Query: 388 RRRPTQHVGCMFDWSVYSW-VYWPPPQLYWA-LQSHGA 495
           RRRP QH   +FD S   W  +  PPQ     + SHGA
Sbjct: 97  RRRPHQHHTTLFDLSRKVWPQFQHPPQAQAVHISSHGA 134


>09_01_0006 - 206409-207464
          Length = 351

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +1

Query: 388 RRRPTQHVGCMFDWSVYSW-VYWPPPQLYWA-LQSHGA 495
           RRRP QH   +FD S   W  +  PPQ     + SHGA
Sbjct: 97  RRRPHQHHTTLFDLSRKVWPQFQHPPQAQAVHISSHGA 134


>08_02_1023 -
           23710825-23710950,23711037-23711120,23711367-23711492,
           23711593-23711712,23712046-23712153,23712243-23712395,
           23712505-23712600,23712716-23712800,23713278-23714268,
           23714870-23714915,23715806-23715964,23716516-23716651,
           23716734-23716900,23717366-23717696,23717827-23718062,
           23718326-23718514
          Length = 1050

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -1

Query: 284 VDYSEDEDEFVEDIVPELVL-DALSLRDPELTEDDALDQETEDGEE 150
           +D+++  DE  ++++ ++V+    S+ D +       D+E EDGEE
Sbjct: 689 LDFTDPADERGDEVIDQVVVKQGESMMDKDDVVSSDSDEEEEDGEE 734


>02_02_0369 -
           9505330-9505652,9507262-9507532,9507649-9507690,
           9508416-9508458,9508853-9508860
          Length = 228

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 453 PVYPGVDRPVEHAPNVLCWATTLDIQTDPCTAAPSGA 343
           P+ PGV  P+  AP +  +    ++ T P T AP G+
Sbjct: 105 PLMPGVRPPILPAPGIPGYPGAPNVPTMPQTGAPPGS 141


>10_08_0445 + 17989438-17990895
          Length = 485

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -3

Query: 465 LWRRPVYPGVDRPVEHAPNVLCWATTLDIQTDPCTA-APSGAGSRRE*TKNTTAS 304
           +W+  +  G  RPV   P    WATT D Q       A + A +RRE  K+ TA+
Sbjct: 357 MWQTILQSGRARPVT-VPKSETWATTTDEQQPRRRERAAAAAVARREIRKSATAT 410


>06_03_0726 +
           23904350-23904964,23905986-23906021,23906158-23906256,
           23906445-23906627,23907016-23907105,23907187-23907285,
           23907584-23907688,23907786-23907926,23908009-23908296,
           23908536-23908826
          Length = 648

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = -3

Query: 444 PGVDRPVEHAPNVLCWA---TTLDIQTDPCTAAPSGAGSRRE*TKNTTAS 304
           P V  PVE    VL W    T+ D+QT PC     GA +    +  T +S
Sbjct: 518 PKVASPVEADGVVLPWLQWETSNDLQTSPCKPKTQGASTACSTSSRTMSS 567


>01_06_0213 + 27580635-27581105,27581206-27581298,27581376-27581540,
            27581640-27581862,27582329-27582429,27582666-27582713,
            27583086-27583172,27583745-27583879,27583985-27584140,
            27585336-27585545,27585641-27586351,27586429-27586974,
            27587872-27588495,27588595-27588699,27590460-27590711,
            27590939-27591766
          Length = 1584

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = -1

Query: 293  VLNVDYSEDEDEFVE--DIVPELVLD-ALSLRDPELTEDDALDQETEDG 156
            +++ D SE+EDE VE  D   E   D A+   D E+ EDD +  + EDG
Sbjct: 1510 MIDDDVSEEEDEDVEGDDDGEEDDADRAVDDVDAEMDEDDDIGDDGEDG 1558


>06_03_0587 + 22555414-22557231
          Length = 605

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 279 INVQYMDEVMLWCSWFTLVGFLHLMGQLCKDRFEYLASS-PNTARWVH 419
           +N  YMD+  L  +    +G+LH M +L  D + YL  + P T  ++H
Sbjct: 492 LNTLYMDDNYLTGNIPPTIGYLHNMNKLYMD-YNYLTGNIPPTIGYLH 538


>05_07_0323 +
           29260608-29260836,29262242-29262513,29263349-29263487,
           29263581-29263714,29263847-29263970,29264364-29264773
          Length = 435

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -1

Query: 350 QVQEADESKPRTPQHHLVHVLNVDYSEDEDEFVEDI 243
           QV E    KPRT     V  LN D  +  DE+V +I
Sbjct: 135 QVNETAHGKPRTGIPIAVKTLNYDGLQGHDEWVAEI 170


>01_06_1431 + 37317248-37317907
          Length = 219

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = -1

Query: 377 KPILAQLPHQVQEADESKPRTPQHHLVHVLNVDYSEDEDEFVEDIVP--ELVLDALSLRD 204
           +P  A  PH  Q A  + P      L     +D +ED+D+  E+++P  E+V  A + RD
Sbjct: 125 RPAAALAPHIPQSAPVNVPVAQFRRLSVEALMDKAEDDDDDDEEMLPPHEMVARARA-RD 183

Query: 203 PELTEDDALD 174
             +T    L+
Sbjct: 184 SPMTTFSVLE 193


>10_08_0608 +
           19184722-19185224,19185331-19185410,19186048-19186235,
           19187021-19187927,19188015-19188142,19189270-19189356,
           19189422-19189472,19189582-19189668,19189746-19189873,
           19190469-19190608,19190721-19190882,19190964-19192733,
           19192807-19192922,19193077-19193227,19193243-19193371,
           19193598-19194139
          Length = 1722

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -1

Query: 410 TCCVGRRR*IFKPILAQLPHQVQEADESKPRTPQHHLVHVLNVDYSE 270
           T CVG+++ I++ +     H+V E      +T  H L  +LN+D  E
Sbjct: 543 TPCVGQKQDIYRLVKVLGTHKVAERYSVGKKTTDHAL-EILNLDKKE 588


>08_01_0626 - 5445676-5446687,5447099-5447430
          Length = 447

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
 Frame = -1

Query: 377 KPILAQLPHQVQEADESKPRTP-QHHLVHVLNVDYSEDEDEFVEDIVPELVLDALSLRDP 201
           +P L +L   ++  DE    +  +H + H +  D  +DE+E  E+   E         D 
Sbjct: 163 RPQLKRLKIHMRWFDEDAMESEMEHEMEHEMMHDDDDDEEEEEEEEEEE---------DE 213

Query: 200 ELTEDDALDQETEDGEE 150
            L ED+ +D + ++GEE
Sbjct: 214 FLYEDENVDDDEDEGEE 230


>07_03_0398 -
           17690979-17690998,17691034-17691446,17691709-17691764,
           17691922-17692054,17694244-17694403,17694862-17694955,
           17695791-17695928,17696017-17696174,17696729-17696810,
           17697055-17697151,17698703-17698824,17699833-17699910,
           17700437-17700565,17701301-17701531
          Length = 636

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 150 FLAVFGFLIQRVVFGQLRVSEAQRVKDKFWNYVFYK 257
           FL ++ F I  + F QL  SE ++V +   NYV YK
Sbjct: 112 FLCMW-FNIHTLFFVQLTSSETRKVLEHIINYVLYK 146


>06_01_0638 + 4640218-4640808
          Length = 196

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 505 PAGKPHATATPNKAVEAASIPRSRPTSRTCTQR 407
           P G   A A   K + AAS+P + PT    T+R
Sbjct: 70  PLGATPAPAPERKGMAAASLPGATPTLTPATER 102


>01_03_0246 -
           14207899-14208052,14208132-14208206,14208682-14208801,
           14208905-14208981,14209204-14209285,14209439-14209485,
           14209561-14209681,14210188-14210235,14210478-14210569,
           14211001-14211057,14211203-14211273,14211376-14211493,
           14211574-14211621
          Length = 369

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 324 FTLVGFLHLMGQLCKDRFEYLASSPNTARWVHVRLVGLLLGILAASTALLGVAVAWGLP 500
           F+ +G+L   G +   +    A  P+++R +H R  GL+  +L    + LGV + W  P
Sbjct: 21  FSYLGYLATAGAVLPGKLVPGAVLPDSSR-LHYRCNGLVSLLLLLVLSALGVYMGWMSP 78


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,167,706
Number of Sequences: 37544
Number of extensions: 347004
Number of successful extensions: 1298
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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