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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060053.seq
         (634 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272...   119   2e-27
07_01_0578 + 4295386-4296489,4297394-4297507                          119   2e-27
10_02_0199 + 6668902-6669293,6669825-6669882                           38   0.009
11_01_0748 + 6299776-6300042                                           32   0.33 
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389...    31   0.58 
03_01_0520 - 3900387-3900613,3900812-3900853,3902092-3902210,390...    31   1.0  
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988     30   1.3  
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61...    29   2.3  
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149     29   2.3  
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323...    29   3.1  
01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078           29   3.1  
10_08_0219 - 15972061-15972110,15972411-15972632,15972673-15972955     29   4.1  
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415...    29   4.1  
02_04_0457 + 23093020-23093343,23093798-23093806                       29   4.1  
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395...    28   7.1  
04_01_0208 + 2596110-2596928                                           28   7.1  
10_08_0213 - 15912048-15912716                                         27   9.4  
08_02_1278 - 25838146-25839411                                         27   9.4  
05_03_0446 + 14111667-14111906,14112011-14112418                       27   9.4  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    27   9.4  
03_06_0646 + 35260497-35262371,35262500-35262683,35262906-352630...    27   9.4  
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657           27   9.4  

>03_06_0298 -
           32925441-32925998,32926371-32926730,32927161-32927230,
           32927642-32927797,32929181-32929242,32929339-32929352,
           32930421-32930520,32931474-32932574
          Length = 806

 Score =  119 bits (287), Expect = 2e-27
 Identities = 50/54 (92%), Positives = 52/54 (96%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWH 115



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = +2

Query: 83  SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           + ARPLVSV + E       A   +P V +APIRPD+V   H  +S N RQPY VS+
Sbjct: 3   AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSR 59



 Score = 36.3 bits (80), Expect = 0.020
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +2

Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
           IE +PE PLVV+D ++ I KT Q++  LK
Sbjct: 147 IEGVPEFPLVVSDSIESIEKTAQSIKVLK 175



 Score = 33.9 bits (74), Expect = 0.11
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = +3

Query: 450 LGGSVAATGVPALVQARGHILKRFPSFP 533
           +  ++AAT VP+LV ARGH ++  P FP
Sbjct: 127 VASALAATAVPSLVLARGHRIEGVPEFP 154


>07_01_0578 + 4295386-4296489,4297394-4297507
          Length = 405

 Score =  119 bits (286), Expect = 2e-27
 Identities = 49/54 (90%), Positives = 52/54 (96%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWH 116



 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +2

Query: 92  RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
           RPLVSV + + +  T   ++  L  VF+AP+RPD+V  VH  +S N RQPY VS+
Sbjct: 6   RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSR 60



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = +2

Query: 509 IEKIPELPLVVADKVQEINKTKQAVIFLK 595
           IE +PELPLV++D  + I KT QA+  LK
Sbjct: 148 IETVPELPLVISDSAESIEKTSQAIKILK 176



 Score = 31.9 bits (69), Expect = 0.44
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 450 LGGSVAATGVPALVQARGHILKRFPSFP 533
           +  ++AAT VP+LV ARGH ++  P  P
Sbjct: 128 VASALAATSVPSLVLARGHRIETVPELP 155


>10_02_0199 + 6668902-6669293,6669825-6669882
          Length = 149

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 22/47 (46%), Positives = 24/47 (51%)
 Frame = +1

Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 381
           RE GGG    A+SW TGRA A + R R GG  R    A  N   G R
Sbjct: 30  REGGGG----AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72


>11_01_0748 + 6299776-6300042
          Length = 88

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +1

Query: 223 LEAALL--REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 378
           LEA L+  R  GGG   + E+ G GRAVA + R      H +G GA      GG
Sbjct: 16  LEAVLVDRRMAGGGDDGAVETGGGGRAVAALARCWRRRWHGAGGGAGAVEAGGG 69


>07_01_0524 +
           3892340-3894625,3894995-3895109,3895204-3895298,
           3895929-3896167,3896524-3896610,3896967-3897066,
           3897908-3898115,3898224-3899422
          Length = 1442

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
 Frame = +1

Query: 217 QELEAALLREQGGGHQTSAESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGR 381
           +++  A   ++GGG   S  S   G++V +  + R+R    H  G G+ G++ +   GG+
Sbjct: 64  EKVSGAKSTDEGGGSDKSKGS-EVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGK 122

Query: 382 MFAPTKP-WR 408
           M  P  P WR
Sbjct: 123 MLRPGFPKWR 132


>03_01_0520 -
           3900387-3900613,3900812-3900853,3902092-3902210,
           3903633-3903712,3903829-3903856,3904151-3904272,
           3904714-3904857,3904897-3906327
          Length = 730

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -1

Query: 376 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDH 254
           HH    + H  + YE+ +  H +  RQ  QY   QH   +H
Sbjct: 150 HHQQYQQHHHQQQYEHQNRIHFQHHRQQQQYQQHQHHNQNH 190


>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
          Length = 292

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/52 (36%), Positives = 22/52 (42%)
 Frame = +1

Query: 55  ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 210
           ASL   N  +  P+F V          G SQA  V + GAH  G  Q C  F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175


>12_01_0073 +
           613316-613447,613611-613802,614067-614232,614460-614845
          Length = 291

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +1

Query: 55  ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 210
           ASL   N  I +PTF +G   +     G S    + + GAH  G  + C  F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176


>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
          Length = 248

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -1

Query: 340 TYEYHH-HGHAEFGRQHVQYPMIQHWFGDHLLAHAVGLPRVLGH 212
           T+++HH HGH  FGR H  +P   H  G  ++ +  G P    H
Sbjct: 144 THDHHHGHGHHLFGRDH--WPASHHPAGG-MVNYGGGAPYYAAH 184


>06_03_0243 +
           18629793-18630047,18630362-18630442,18631911-18632305,
           18632471-18632926,18633156-18633247,18633528-18633683,
           18635657-18636057
          Length = 611

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
 Frame = +1

Query: 133 AGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGGHQTSAESWGTGRAVARIP 312
           +G ++A  + +    P GP    ++  +++L A   RE     + +A +  T +A   + 
Sbjct: 448 SGYTRAATLNLPSVIPIGPRN--TQENIKQLLAGGQRELVATGEAAATAAATAKATPPLA 505

Query: 313 R-VRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 411
           R    GG HR G+G  G    GG        WRR
Sbjct: 506 RRTADGGAHR-GRGGGGAEADGGARRGRGGGWRR 538


>01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078
          Length = 455

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
 Frame = +1

Query: 250 GGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ--GAFGNMCRGGRMFAPTKPWRRW 414
           GGG   S  S G       +    GGG  R G   GA G +  GG      + WRRW
Sbjct: 74  GGGDDGSGHSGGRSSPPGWLRPAGGGGRRRGGHGGGAGGGVGAGG----GAEWWRRW 126


>10_08_0219 - 15972061-15972110,15972411-15972632,15972673-15972955
          Length = 184

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 250 GGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 360
           GGG       WG+G   +   +  GGG + SG G  G
Sbjct: 38  GGGGSNGGSGWGSGSG-SGYGQASGGGAYASGGGGAG 73


>07_03_0329 +
           16840051-16840917,16840999-16841342,16841444-16841574,
           16841671-16841792,16841877-16841983,16842104-16842236,
           16842342-16842458,16842560-16842667,16842716-16842742,
           16842759-16842830,16843462-16843584,16843671-16843833,
           16844140-16844264,16844355-16844489,16844574-16844677,
           16844772-16844834,16844930-16844993,16845186-16845318,
           16845414-16845487,16845603-16845697,16845799-16845830,
           16846201-16846355
          Length = 1097

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 250 GGGHQTSAES-WGTGRAVARIPRVRGGGTHRSGQGAFGN 363
           GGG+    E+ +G GR        RGGG  R G+G  G+
Sbjct: 168 GGGYHGDGEAGYGRGRGGRDYDGGRGGGGRRGGRGGGGS 206


>02_04_0457 + 23093020-23093343,23093798-23093806
          Length = 110

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 360
           G + S   W  G A A    VRGGG  RSG G  G
Sbjct: 76  GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109


>10_01_0359 +
           3956527-3956616,3957623-3957818,3958102-3959418,
           3959482-3960445,3960588-3960648,3961500-3961946
          Length = 1024

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 397 SWGRTYVHHDTCYRRHPDRTYEYHH 323
           SWGR   H D   RR P R+  +HH
Sbjct: 303 SWGRD--HADNRLRRSPSRSSNFHH 325


>04_01_0208 + 2596110-2596928
          Length = 272

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
 Frame = +1

Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF-GNMCRGGRMFAPTKP-WRRW 414
           R +GGG +   E    GR         GGG     + A  G   R        +P WRRW
Sbjct: 118 RGRGGGCEAEGEDGAAGRRSGEEGEAAGGGRRGGKRRAMAGTRLRRSPCETEGRPGWRRW 177


>10_08_0213 - 15912048-15912716
          Length = 222

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +1

Query: 247 QGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 378
           QGGG+  S   +G+GR   +     GGG + SG G  G   +GG
Sbjct: 160 QGGGYG-SGSGYGSGRGYGQGGGAYGGG-YASGGGGGGGGGQGG 201


>08_02_1278 - 25838146-25839411
          Length = 421

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 592 QEDDSLFGLVDLLDFVGYNQGKLGNLFN 509
           +E   LF L+D+LD V   +G+L  LF+
Sbjct: 91  REPQRLFRLLDMLDAVARERGRLDELFS 118


>05_03_0446 + 14111667-14111906,14112011-14112418
          Length = 215

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 384 VRPHEALAALAPSRQPPTAESGLGGSVAATG 476
           +RP ++LA L+P+R   +A +G G + A +G
Sbjct: 114 LRPTKSLAHLSPARASSSAAAGGGSATAPSG 144


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +3

Query: 390  PHEALAALAPSRQPPTAESGLGGSVAATGVPA 485
            P  A   +AP   PP    G+GG     G PA
Sbjct: 1175 PPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPA 1206


>03_06_0646 +
           35260497-35262371,35262500-35262683,35262906-35263007,
           35263101-35263231,35263315-35263584,35263765-35263943,
           35264229-35264275,35264452-35264541,35264596-35264645,
           35264673-35264725,35264886-35265009,35265094-35265369,
           35265460-35265593,35265672-35265758,35265864-35265977,
           35266180-35266309
          Length = 1281

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +2

Query: 197 DVHVSMSKNSRQPYCVSKEVVTKPVLNHGVL 289
           DVH+ +++NSR  Y ++K++V      HGVL
Sbjct: 798 DVHIVLTENSRDRY-INKKLVAVGRDKHGVL 827


>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
          Length = 390

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 349 PDRTYEYHHHGHAEFGRQHVQYPMIQH 269
           P   + +HHHGH   G  H Q    QH
Sbjct: 33  PQEHHHHHHHGH--HGHHHEQQQQQQH 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,090,606
Number of Sequences: 37544
Number of extensions: 428479
Number of successful extensions: 1734
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1727
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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