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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_A11
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029...    32   0.55 
07_03_1747 + 29188568-29188715,29188793-29189541                       31   1.7  
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321...    30   2.2  
04_04_1667 + 35211776-35212132,35212640-35212727,35213573-352137...    30   2.9  
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305...    29   3.9  
03_05_0505 + 24991699-24991921,24992100-24992665                       29   5.2  
01_01_0084 - 636835-637965                                             29   6.8  
10_02_0195 + 6578384-6578629,6578710-6579300,6586302-6587512,658...    28   9.0  
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707...    28   9.0  
04_03_0562 + 17190443-17190520,17190715-17190853,17190943-171910...    28   9.0  
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198...    28   9.0  
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    28   9.0  

>05_03_0366 -
           13102147-13102281,13102560-13102739,13102791-13102992,
           13104385-13104575
          Length = 235

 Score = 32.3 bits (70), Expect = 0.55
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 313 HQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQM-QGQVDYDFGVGG 149
           H P AAA  P VP++    P  L +     GG GL   S S +  G  + D G+GG
Sbjct: 7   HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61


>07_03_1747 + 29188568-29188715,29188793-29189541
          Length = 298

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +3

Query: 366 PPPGTTLSAPVYLITAPSPG*SAWTLALQFLCS*TIGPTTCRLARSSSVLG 518
           PPP TT++  V L TA +   S   +  QF+C+     TTC  + S S+ G
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLPG 260


>11_06_0411 -
           23230580-23230795,23231407-23231862,23232142-23232195,
           23232251-23232367
          Length = 280

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 211 VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTL 327
           V+ H  +  R S EL+RQ  ELER+G  L+   G L  +
Sbjct: 89  VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127


>04_04_1667 +
           35211776-35212132,35212640-35212727,35213573-35213705,
           35213806-35214616
          Length = 462

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -1

Query: 711 PXSGXVPGAAFPGKTXGTLPRELPPSPRSWXCTALDRSVTSHAPD 577
           P S   PG   PG+    LPR    S RS   +    S+T H+ D
Sbjct: 267 PASAVEPGGIVPGQPKELLPRLFEESFRSMATSFSKYSITDHSTD 311


>08_02_1291 +
           25930056-25930067,25930289-25930334,25930434-25930546,
           25930645-25930930,25931357-25931421,25931642-25931693,
           25931774-25931883,25932611-25932641,25932853-25933004,
           25934622-25934840
          Length = 361

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 226 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 137
           +GG  L    ++Q  G   Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129


>03_05_0505 + 24991699-24991921,24992100-24992665
          Length = 262

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/39 (41%), Positives = 17/39 (43%)
 Frame = -2

Query: 704 AAXCPGRRFPERHXEHCHASFHLRHGPGXAPHWTDPSHP 588
           A  C G R P       HA   LRHG G    W DP+ P
Sbjct: 55  ARCCAGPRPPAT----AHACALLRHGGGDGDGWADPAAP 89


>01_01_0084 - 636835-637965
          Length = 376

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 693 PGAAFPGKTXGTLPRELPPSPRSWXCTALDRSVTSHA 583
           PGAA P  T   LP ++PPS   W  +  D ++ + A
Sbjct: 28  PGAAPPPPTSSALPTQIPPS--DWSLSPADPALATAA 62


>10_02_0195 +
           6578384-6578629,6578710-6579300,6586302-6587512,
           6587593-6587844,6587932-6588042,6588133-6588214,
           6588299-6588382,6588464-6588658
          Length = 923

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 660 TLPRELPPSPRSWXCTALDRSVTSHAPDSN 571
           TLPR+  P+P+S+    LD  V    PD++
Sbjct: 496 TLPRQPSPAPQSYLVPPLDEHVPPPQPDTS 525


>07_03_0809 -
           21669632-21669637,21669871-21670131,21670573-21670752,
           21671458-21672819
          Length = 602

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +2

Query: 98  SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 253
           +L   +D L+  YD+  PPDS+ V        HA      + +R+L  + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209


>04_03_0562 +
           17190443-17190520,17190715-17190853,17190943-17191034,
           17191681-17191989,17192817-17193506
          Length = 435

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -2

Query: 719 GXGXXAAXCPGRRFPERHXEHCHAS 645
           G G  A  C GRR P RH  H  A+
Sbjct: 131 GRGGAAGACKGRRKPARHDWHVQAA 155


>02_01_0296 +
           1978565-1981197,1981216-1981639,1982280-1982771,
           1982950-1983087
          Length = 1228

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 395 GRGERSPRRWLQPRLAVPRQASTSVPRTP 309
           GRG RS  R L+P LA+   A + +P  P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470


>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -3

Query: 340 VRPPQAFRGHQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQV 173
           ++PP     H   + AP P +P+ S   P++  +   PH        S +QM  Q+
Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQM 606


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,088,598
Number of Sequences: 37544
Number of extensions: 626535
Number of successful extensions: 1919
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1917
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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