Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30002
(630 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 186 2e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 186 2e-47
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 3e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 9e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 2e-25
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 6e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 85 3e-17
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 67 1e-11
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 66 2e-11
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 62 4e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 7e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 49 4e-06
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 40 0.002
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.063
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.083
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 0.58
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.58
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 30 1.8
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.8
SB_24944| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 29 3.1
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 4.1
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 28 5.4
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 7.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 7.2
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_55327| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_42662| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_20183| Best HMM Match : Astacin (HMM E-Value=2.2e-06) 27 9.5
SB_9298| Best HMM Match : rve (HMM E-Value=4.8e-35) 27 9.5
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 27 9.5
SB_18995| Best HMM Match : rve (HMM E-Value=0.0012) 27 9.5
SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9) 27 9.5
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 186 bits (452), Expect = 2e-47
Identities = 95/125 (76%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
REKMTQIMFETFN+PAMYVAIQAV S + + V+ T P PHA
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHA 174
Query: 614 ILRLD 628
ILRLD
Sbjct: 175 ILRLD 179
Score = 111 bits (267), Expect = 5e-25
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 186 bits (452), Expect = 2e-47
Identities = 95/125 (76%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
REKMTQIMFETFN+PAMYVAIQAV S + + V+ T P PHA
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHA 174
Query: 614 ILRLD 628
ILRLD
Sbjct: 175 ILRLD 179
Score = 112 bits (270), Expect = 2e-25
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 186 bits (452), Expect = 2e-47
Identities = 95/125 (76%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
REKMTQIMFETFN+PAMYVAIQAV S + + V+ T P PHA
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHA 175
Query: 614 ILRLD 628
ILRLD
Sbjct: 176 ILRLD 180
Score = 118 bits (285), Expect = 3e-27
Identities = 53/55 (96%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 185 bits (450), Expect = 3e-47
Identities = 94/125 (75%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
REKMTQIMFETFN+PAMYVAIQAV S + + V+ T P PHA
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHA 175
Query: 614 ILRLD 628
I+RLD
Sbjct: 176 IIRLD 180
Score = 114 bits (274), Expect = 6e-26
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 183 bits (446), Expect = 9e-47
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV 508
REKMTQIMFETFN+PAMYVAIQAV
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAV 140
Score = 114 bits (274), Expect = 6e-26
Identities = 50/55 (90%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/33 (84%), Positives = 31/33 (93%), Gaps = 2/33 (6%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 600
+SLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 141 LSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 112 bits (270), Expect = 2e-25
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 361
DEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 606
+SLYASGRTTGIV+DSGDGV+HTVPIYEGYALP
Sbjct: 103 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALP 135
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 434 NREKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPH 610
N + M +IMFETFN+PAMYVAIQAV S + + V+ T P PH
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPH 136
Query: 611 AILRLD 628
AI+RLD
Sbjct: 137 AIIRLD 142
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 97.9 bits (233), Expect = 6e-21
Identities = 45/100 (45%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Frame = +2
Query: 212 SGRDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 388
S + G + L+ DEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 389 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 508
VLLTE PLNP NREKM ++MFE + +Y+AIQAV
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAV 143
Score = 54.4 bits (125), Expect = 7e-08
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 606
++LYA G TG+V+DSGDGV+H P+YEG+ALP
Sbjct: 144 LTLYAQGLLTGVVIDSGDGVTHICPVYEGFALP 176
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 108 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 206
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/56 (67%), Positives = 46/56 (82%)
Frame = +2
Query: 341 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 508
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAV 2184
Score = 60.1 bits (139), Expect = 1e-09
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 606
++LYASGRTTG V D GDGVSHTVP+Y+GY LP
Sbjct: 2185 MALYASGRTTGTVFDCGDGVSHTVPVYDGYWLP 2217
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 215
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 606
+SLYASGRTTG+V DSGDGVSH VPIYEGYALP
Sbjct: 19 LSLYASGRTTGVVFDSGDGVSHNVPIYEGYALP 51
Score = 36.7 bits (81), Expect = 0.016
Identities = 24/58 (41%), Positives = 27/58 (46%)
Frame = +2
Query: 455 IMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHAILRLD 628
IMFE FN+PA+YVAIQAV + P PHAILRLD
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLD 58
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/40 (65%), Positives = 35/40 (87%)
Frame = +2
Query: 389 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 508
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAV 165
Score = 64.5 bits (150), Expect = 7e-11
Identities = 26/33 (78%), Positives = 33/33 (100%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 606
+SLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+P
Sbjct: 166 LSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMP 198
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 62.1 bits (144), Expect = 4e-10
Identities = 25/70 (35%), Positives = 44/70 (62%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 478
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 479 PAMYVAIQAV 508
PA ++ +V
Sbjct: 63 PAFFLCKNSV 72
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +1
Query: 502 SRVSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 603
S ++ +A+GR+ G+V+DSG + VP+++GY L
Sbjct: 71 SVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVL 104
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 215
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 84 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 230
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 603
+SLYASG T G+ L SG + IYEG+ L
Sbjct: 770 LSLYASGMTLGVCLSSGFSCTQAAVIYEGHTL 801
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 406
DEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 288 DEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.33
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 535 TGIVLDSGDGVSHTVPI 585
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 535 TGIVLDSGDGVSHTVPIYEGYAL 603
TG V+DSGDGV+H +P+ EGY +
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVI 84
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 34.7 bits (76), Expect = 0.063
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -2
Query: 212 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 96
MA + D G++ + SI+S E GLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 34.3 bits (75), Expect = 0.083
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 215 GRDGRYGTEGLLCRDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 385
GR G + GL ++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 386 EEHPVLLTEAPLNPKANRE 442
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 459 CSKHSTRPPCTSPSKPCLAVRVRSYHRYRAG 551
C H+ R P T+PS PC V S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Frame = +2
Query: 515 CTRPVVPPVSCWTPATVSPTPC-----PSTRDTHCP 607
CT+ +P +TP T TPC PST +H P
Sbjct: 859 CTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 449 TQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSPTP 577
+Q+ E +N P+ + + CT +P +TP T TP
Sbjct: 611 SQVNSERYNAPSQSPCTERYTPCTERYIPCTERYTPCTERYTP 653
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 415 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 507
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 379
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -1
Query: 333 SSQLVTI--PCSMGYLRV-RIPLLLCASSLHKSPSVPYRP 223
S LV++ P S Y + RIP LC SL PS PY+P
Sbjct: 260 SPSLVSLQAPLSYSYKPLPRIPSSLCLLSLQAPPSYPYKP 299
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYNE 370
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 102 EVAALVVDNGSGMCKAGFAGDDAPRAV 182
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_24944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -2
Query: 260 HLYI--RVLLSHTDHHALMAGPSHDRGKHCARSIISCEAGLAHTGAIVYY 117
H+Y+ R++ S T H + G H G H ++ EAGL I+ +
Sbjct: 31 HVYLIYRLVFSATIEHEYLGGRYHSIGAHISQETSRHEAGLTQISRIIRF 80
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +2
Query: 413 APLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSPTPCPS 586
A P A + + +NTP I + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMP--PISSTPYQAPPTLPPTTLTTPSWSQPVPVPS 943
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +1
Query: 373 ACRPRGTPRPAY*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRVSLYASGRTTGIVLD 552
ACR R PR P P+ + ++D D +I R P R + +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 553 SGDGVSHTVPI 585
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +2
Query: 395 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSP- 571
PVL A P A + TQ + P ++ V+ P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTVPPP 81
Query: 572 --TPCPST 589
T P+T
Sbjct: 82 VVTDAPTT 89
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 321 VTIPCSMGYLRVRIPLLLCASSLHKSPSVP 232
V PC M LRVR+ C S LH + P
Sbjct: 60 VACPCCMSLLRVRVVCPCCMSVLHVRVACP 89
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 212 SGRDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHHTFYN 367
+GR+ G+ +CR +A ++TL + I G+ + D EK+W+HT N
Sbjct: 451 TGREESGGSGTQVCRKKAP----LITLSHVIRMGLALSLVSDVKEKVWYHTCPN 500
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +2
Query: 356 TFYNELRVAPE----EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTR 523
T +E VAP+ L E + P+ + + ET P VA + +
Sbjct: 487 TVASETTVAPKTTAASEATLAPETTVAPETTAAPESTLALETTAAPVTTVAPETTAAPDT 546
Query: 524 PVVPPVSCWTPATVSP--TPCPST 589
P+VP + +TV+P T P T
Sbjct: 547 PIVPETTVALESTVAPEITVVPET 570
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/88 (23%), Positives = 31/88 (35%)
Frame = +2
Query: 356 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVP 535
T E VAPE + E ++P+ T + ET TP VA + V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 536 PVSCWTPATVSPTPCPSTRDTHCPHAIL 619
+ TV+P + T P +
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAPETTM 4267
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 27.9 bits (59), Expect = 7.2
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Frame = +2
Query: 368 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVP 535
E APE V T AP + P+ +T + ET PA A++ + +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 536 PVSCWTPATVSP--TPCPST 589
+ + TV+P T P+T
Sbjct: 1383 ETTASSETTVAPETTDAPAT 1402
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +2
Query: 500 QAVSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
Q S+C R + SC P T + PC + C H+
Sbjct: 1920 QCKSKCDRTLFCGHSCQEPCTKNCPPCQKQCENKCEHS 1957
>SB_55327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 462 SKHSTRPPCTSPSKPCLAVRVRSYHRYRAG 551
S S R P T+PS PC V S Y AG
Sbjct: 492 SGSSAREPSTAPSLPCDLVAATSAKMYLAG 521
>SB_42662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -1
Query: 594 SLVDGHGVGDTVAGVQHDTGG--TTGRVQRDTAWMATY 487
+L GHGV G TGG + GRV +W+ Y
Sbjct: 581 TLFSGHGVISASGGAGSGTGGGGSGGRVAAHVSWLREY 618
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 202 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 92
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_20183| Best HMM Match : Astacin (HMM E-Value=2.2e-06)
Length = 230
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1
Query: 285 RIPLLLCASSLHKSPSVPYRP 223
RIP L SL SPS PY+P
Sbjct: 80 RIPTSLSLISLQSSPSYPYKP 100
>SB_9298| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1514
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 294 LRVRIPLLLCASSLHKSPSVPYRPSRPDGGAFPRSRETLR 175
L+ R+ L LC + + +S V Y GG F R + LR
Sbjct: 1128 LKTRLDLWLCGTIIQQSGPVSYVVKLSSGGVFRRHVDHLR 1167
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 362 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSR 514
Y +L V +PV T+ + + N + TQ+M T P Y + +R
Sbjct: 116 YTQLMVFTRYNPVRYTQLMVFTRYNHVRYTQLMVFTRYNPVRYAQLMVFTR 166
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 407 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSPTP 577
T+AP L PK T + ET + PA+ +A + + V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 578 CPSTRDTHCP 607
+T T P
Sbjct: 575 TAATEITAAP 584
>SB_18995| Best HMM Match : rve (HMM E-Value=0.0012)
Length = 1225
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 207 GAFPRSRETLREEHHLLRSRPCTYRS 130
G +P S++T R E + +RPCT S
Sbjct: 832 GCYPWSKQTFRHEGPPISARPCTAMS 857
>SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9)
Length = 334
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1
Query: 285 RIPLLLCASSLHKSPSVPYRP 223
RIP L SL SPS PY+P
Sbjct: 57 RIPTSLSLISLQSSPSYPYKP 77
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,203,492
Number of Sequences: 59808
Number of extensions: 575546
Number of successful extensions: 2410
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2396
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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