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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00011
         (754 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)                 145   4e-35
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)              94   1e-19
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)              87   1e-17
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)              85   8e-17
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)               81   9e-16
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)              71   8e-13
SB_37351| Best HMM Match : DEAD (HMM E-Value=0)                        69   4e-12
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)              69   4e-12
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)              68   7e-12
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)            66   4e-11
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)            66   4e-11
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)              62   5e-10
SB_52320| Best HMM Match : DEAD (HMM E-Value=0)                        62   5e-10
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)                      60   1e-09
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)            60   3e-09
SB_9558| Best HMM Match : DEAD (HMM E-Value=0)                         56   3e-08
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)               56   4e-08
SB_17563| Best HMM Match : DEAD (HMM E-Value=0)                        55   7e-08
SB_2247| Best HMM Match : DEAD (HMM E-Value=0)                         55   7e-08
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)                  54   9e-08
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)                  54   1e-07
SB_43842| Best HMM Match : RNB (HMM E-Value=0)                         54   1e-07
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)              53   2e-07
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)                   51   9e-07
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)                    51   1e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   2e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)            48   6e-06
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)              48   8e-06
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)                  48   1e-05
SB_32980| Best HMM Match : DEAD (HMM E-Value=0)                        44   1e-04
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   5e-04
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)               39   0.005
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)                  38   0.007
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)            38   0.007
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.015
SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.020
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.027
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.035
SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10)             33   0.19 
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.25 
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)                  32   0.57 
SB_14172| Best HMM Match : VHP (HMM E-Value=3.8)                       32   0.57 
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.57 
SB_7386| Best HMM Match : Helicase_C (HMM E-Value=0.086)               32   0.57 
SB_47383| Best HMM Match : LON (HMM E-Value=1.3)                       31   0.76 
SB_11957| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_31989| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.3  
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)                      30   2.3  
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)               29   3.1  
SB_53151| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)             29   5.4  
SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)                      28   9.4  
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)                  28   9.4  

>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
          Length = 690

 Score =  145 bits (351), Expect = 4e-35
 Identities = 63/86 (73%), Positives = 75/86 (87%)
 Frame = +3

Query: 255 LDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQ 434
           LDEADRMLDMGFEPQIR II+QIRPDRQTLMWSATWPKEV+ LA D+L DY+ I +GSL 
Sbjct: 212 LDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHITVGSLG 271

Query: 435 LSANHNILQIVDICQEHEKENKLNVY 512
           L+ANH ILQIVD+C++HEKE+ +  +
Sbjct: 272 LTANHKILQIVDVCEDHEKEHNVGSF 297



 Score =  123 bits (296), Expect = 2e-28
 Identities = 58/83 (69%), Positives = 66/83 (79%)
 Frame = +1

Query: 10  GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 189
           GDGPI LVL PTRELAQQ+Q+VA   G    +R+TC++GGAPK  Q R+LERGVEI IAT
Sbjct: 130 GDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIAT 189

Query: 190 PGRLIDFLEKGTTNLQRCTYLVL 258
           PGRLID LE   TNL+RCTYLVL
Sbjct: 190 PGRLIDMLESRKTNLRRCTYLVL 212



 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +2

Query: 548 KTIIFVETKRKAEPISRNIRRYG 616
           +T+IF ETKR+A+ ++R +R  G
Sbjct: 308 QTLIFTETKRRADELTRKLRSDG 330


>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 790

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 46/82 (56%), Positives = 54/82 (65%)
 Frame = +1

Query: 10  GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 189
           GDGPI L+ APTREL QQI   A  FG    +    VFGG  K EQ++ L+ G EIV+AT
Sbjct: 588 GDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVAT 647

Query: 190 PGRLIDFLEKGTTNLQRCTYLV 255
           PGRLID ++   TNL R TYLV
Sbjct: 648 PGRLIDHVKAKATNLHRVTYLV 669



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 37/57 (64%)
 Frame = +2

Query: 554 IIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATDVA 724
           +IFV  K  +E ++ N+R+  +    +HGD  Q ER++VL QFK+    ILVATDVA
Sbjct: 733 LIFVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVLGQFKKREIPILVATDVA 789


>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1170

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 45/103 (43%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
 Frame = +3

Query: 207  FLGKGHNQLTAVHIFSLDEADRMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEV 374
            F+ KG   L  +    LDEADRMLDMGFEP IR+I+E +    + +RQTLM+SAT+P+E+
Sbjct: 852  FIEKGKVSLKGLQFLILDEADRMLDMGFEPAIRRIVESMGMPDKSERQTLMFSATFPEEI 911

Query: 375  KKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 503
            ++LA D+L DY+ + +G +      +I Q V    ++EK ++L
Sbjct: 912  QRLAGDFLNDYLFLTVGRVG-GTTSDIEQTVIEVTDNEKRDRL 953



 Score = 75.8 bits (178), Expect = 4e-14
 Identities = 32/69 (46%), Positives = 51/69 (73%)
 Frame = +2

Query: 548  KTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATDVAA 727
            +T++FVE+KR A+ ++  +   G+P   +HGD+ QQER E L  F++GR  +L+AT+VAA
Sbjct: 964  RTLVFVESKRSADFLAIFLSGEGFPTTSIHGDRLQQEREEALDDFRKGRCPVLIATNVAA 1023

Query: 728  RGLDVDGIQ 754
            RGLD+D ++
Sbjct: 1024 RGLDIDDVK 1032



 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 34/80 (42%), Positives = 48/80 (60%)
 Frame = +1

Query: 19   PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 198
            P A+ +APTRELA QI   A  F H + +R    +GG     Q R L+ G  +++ TPGR
Sbjct: 789  PQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCNLLVGTPGR 848

Query: 199  LIDFLEKGTTNLQRCTYLVL 258
            L DF+EKG  +L+   +L+L
Sbjct: 849  LTDFIEKGKVSLKGLQFLIL 868


>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1375

 Score = 84.6 bits (200), Expect = 8e-17
 Identities = 48/102 (47%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
 Frame = +3

Query: 210  LGKGHNQLTAVHIFSLDEADRMLDMGFEPQIRKIIEQ-IRPD---RQTLMWSATWPKEVK 377
            + +G   L ++    LDEADRMLDMGFEPQIR+I++Q   P    RQTLM+SAT+PKE++
Sbjct: 990  MDRGRVGLDSIRFLVLDEADRMLDMGFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQ 1049

Query: 378  KLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 503
             LA D+L +YI + +G +  S + NI Q V    E +K + L
Sbjct: 1050 MLARDFLENYIFLAVGKVG-STSENITQKVVWVDEFDKRSFL 1090



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 32/84 (38%), Positives = 52/84 (61%)
 Frame = +2

Query: 503  KCLLQEIGQSQEPGAKTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQF 682
            +  L ++  +  P   T++FVETK+ A+ +   + + G+    +HGD++Q+ER E L  F
Sbjct: 1087 RSFLLDLLNASGPQQLTLVFVETKKGADALEMFLAKDGYYCTSIHGDRSQREREEALRTF 1146

Query: 683  KEGRASILVATDVAARGLDVDGIQ 754
            + G   ILVAT VAARGLD+  ++
Sbjct: 1147 RCGDTPILVATAVAARGLDIPNVK 1170



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
 Frame = +1

Query: 10   GDGPIALVLAPT-RELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 186
            G G  A  L P    +  +      DF + S  R   V+GGA    Q R+L+R   +++A
Sbjct: 922  GSGKTAAFLIPILSRIYMEGPPAPPDFSYRSLCRPCVVYGGADIGSQLRELDRNCHLLVA 981

Query: 187  TPGRLIDFLEKGTTNLQRCTYLVL 258
            TPGRL+D +++G   L    +LVL
Sbjct: 982  TPGRLVDMMDRGRVGLDSIRFLVL 1005


>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 592

 Score = 81.0 bits (191), Expect = 9e-16
 Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
 Frame = +1

Query: 10  GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 189
           G   IA+V+ PTRELA QI +    F   + +R  CV+GG    EQ  +L+RG EI++ T
Sbjct: 142 GRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCT 201

Query: 190 PGRLIDFLEKG---TTNLQRCTYLVL 258
           PGR+ID L       TN QRCTYLVL
Sbjct: 202 PGRMIDMLTANNGRVTNCQRCTYLVL 227



 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 13/106 (12%)
 Frame = +3

Query: 255 LDEADRMLDMGFEPQIRKI--------IEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYI 410
           LDEADRM DMGFEPQI KI        I+ IRPDRQT+M+SAT+P++++ LA   L   I
Sbjct: 227 LDEADRMFDMGFEPQITKIRYPKVMRIIDCIRPDRQTVMFSATFPRQMEALARKILDKPI 286

Query: 411 QINIGSLQL---SANHNI-LQIVDICQEHEKENK-LNVYCKKLDKV 533
           +I +G   +       N+ L + D   E E E K +    K+LD V
Sbjct: 287 EIQVGGRSVVCSDVEQNVALGLQDSDDEAEAEEKAVEEIDKRLDAV 332


>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 478

 Score = 71.3 bits (167), Expect = 8e-13
 Identities = 36/78 (46%), Positives = 45/78 (57%)
 Frame = +1

Query: 25  ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 204
           ALVLAPTRELAQQIQ+V    G   +V+     GG   RE    LE GV +V+ TPGR+ 
Sbjct: 162 ALVLAPTRELAQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVF 221

Query: 205 DFLEKGTTNLQRCTYLVL 258
           D + +G  N +     VL
Sbjct: 222 DMINRGVLNTRDIKLFVL 239



 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 22/65 (33%), Positives = 40/65 (61%)
 Frame = +2

Query: 548 KTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATDVAA 727
           + +IF  T+RK + ++  +         MHGD +Q+ER  ++ +F+ G + +L+ TD+ A
Sbjct: 332 QAVIFANTRRKVDWLAAKMTEKDHTVSSMHGDMSQKERDIIMKEFRSGSSRVLITTDLLA 391

Query: 728 RGLDV 742
           RG+DV
Sbjct: 392 RGIDV 396



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 20/59 (33%), Positives = 35/59 (59%)
 Frame = +3

Query: 240 VHIFSLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 416
           + +F LDEAD ML  GF+ QI  +  ++    Q ++ SAT P +V ++   ++ D ++I
Sbjct: 234 IKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRI 292


>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 688

 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 31/84 (36%), Positives = 52/84 (61%)
 Frame = +1

Query: 7   RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 186
           RG  P  LV+APTRELA+Q+     +    S +   C++GG P   Q   +  G+++++ 
Sbjct: 144 RGRAPKVLVMAPTRELAKQVGNEFENL--KSNLEVYCIYGGMPYEPQENAINSGLDVLVG 201

Query: 187 TPGRLIDFLEKGTTNLQRCTYLVL 258
           TPGR++DF+ +GT +L +  ++VL
Sbjct: 202 TPGRILDFMRQGTLDLSKLKHVVL 225



 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 30/68 (44%), Positives = 43/68 (63%)
 Frame = +2

Query: 548 KTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATDVAA 727
           +T+IF +TK++A  ++ N        V +HGD  Q++R   L  F+EG+   LVATDVAA
Sbjct: 307 RTMIFAQTKKEANELALNSVLKQETQV-LHGDIPQKQREVTLKSFREGKFRCLVATDVAA 365

Query: 728 RGLDVDGI 751
           RGLD+  I
Sbjct: 366 RGLDIPEI 373



 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
 Frame = +3

Query: 207 FLGKGHNQLTAVHIFSLDEADRMLDMGFEPQIRKII----EQIRPDR-QTLMWSATWPKE 371
           F+ +G   L+ +    LDE DRMLDMGF   + +++     + R D+ QTL++SAT P  
Sbjct: 209 FMRQGTLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDREDKPQTLLFSATLPPW 268

Query: 372 VKKLAEDYL 398
               A+ Y+
Sbjct: 269 AVNTAKKYM 277


>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 268

 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 31/70 (44%), Positives = 49/70 (70%)
 Frame = +3

Query: 282 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 461
           MGFEP+I+KI+  IRPDRQT+M SATWP  V+++A+ Y+ D +++ +G L L    N+++
Sbjct: 1   MGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFVGCLDL----NVIE 56

Query: 462 IVDICQEHEK 491
            ++     EK
Sbjct: 57  FIEGMAPGEK 66



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +2

Query: 650 QQERAEVLYQFKEGRASILVATDVAARGLDVDGI 751
           Q +R + L  FK G A IL+ATDVA+RGLD+  I
Sbjct: 78  QYDREQALDDFKTGLARILIATDVASRGLDIKDI 111


>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 797

 Score = 68.1 bits (159), Expect = 7e-12
 Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
 Frame = +3

Query: 207 FLGKGHNQLTAVHIFSLDEADRMLDMGFEPQIRKIIEQ----IRPDRQTLMWSATWPKEV 374
           F+ +    L ++    LDEADRMLD+GF P I K+IE+     +  RQTLM+SAT+P E+
Sbjct: 616 FVSREKIYLGSIQHLILDEADRMLDLGFGPDIHKLIEESNMTAKESRQTLMFSATFPDEI 675

Query: 375 KKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENKLN 506
           + LA  +L  DY+ + +G +    N +I Q V      EK +KL+
Sbjct: 676 QHLAGSFLKPDYLFLAVGRVG-GTNLDITQHVITVNGSEKRDKLH 719



 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 32/80 (40%), Positives = 45/80 (56%)
 Frame = +1

Query: 19  PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 198
           P+AL +APTRELA+QI   A  F   + ++    +GG     QA  LERG   ++ TPGR
Sbjct: 553 PLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSVPYQASQLERGCHFLVGTPGR 612

Query: 199 LIDFLEKGTTNLQRCTYLVL 258
           L DF+ +    L    +L+L
Sbjct: 613 LQDFVSREKIYLGSIQHLIL 632


>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
          Length = 445

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 30/86 (34%), Positives = 54/86 (62%)
 Frame = +3

Query: 255 LDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQ 434
           LDEADRM+DMGFE  +R I    +  RQTL++SAT PK+++  A+  L   + +N+G   
Sbjct: 22  LDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAG 81

Query: 435 LSANHNILQIVDICQEHEKENKLNVY 512
            +A+ +++Q++   ++    + ++ Y
Sbjct: 82  -AASLDVIQVLIFAEKKSDVDDIHEY 106



 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 29/69 (42%), Positives = 42/69 (60%)
 Frame = +2

Query: 548 KTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATDVAA 727
           + +IF E K   + I   +   G  AV +HGDK+Q+ER   + +F +G   +LVATDVA+
Sbjct: 89  QVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVAS 148

Query: 728 RGLDVDGIQ 754
           +GLD   IQ
Sbjct: 149 KGLDFPDIQ 157


>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
          Length = 212

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 30/86 (34%), Positives = 54/86 (62%)
 Frame = +3

Query: 255 LDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQ 434
           LDEADRM+DMGFE  +R I    +  RQTL++SAT PK+++  A+  L   + +N+G   
Sbjct: 22  LDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAG 81

Query: 435 LSANHNILQIVDICQEHEKENKLNVY 512
            +A+ +++Q++   ++    + ++ Y
Sbjct: 82  -AASLDVIQVLIFAEKKSDVDDIHEY 106



 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 29/69 (42%), Positives = 42/69 (60%)
 Frame = +2

Query: 548 KTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATDVAA 727
           + +IF E K   + I   +   G  AV +HGDK+Q+ER   + +F +G   +LVATDVA+
Sbjct: 89  QVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVAS 148

Query: 728 RGLDVDGIQ 754
           +GLD   IQ
Sbjct: 149 KGLDFPDIQ 157


>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 370

 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 26/68 (38%), Positives = 43/68 (63%)
 Frame = +2

Query: 548 KTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATDVAA 727
           + +IF  TKRK + ++  +R   +    MHGD  Q+ER  ++  F+ G++ +L++TDV A
Sbjct: 238 QAVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWA 297

Query: 728 RGLDVDGI 751
           RGLDV  +
Sbjct: 298 RGLDVQQV 305



 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 33/80 (41%), Positives = 41/80 (51%)
 Frame = +1

Query: 19  PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 198
           P ALVL+PTRELA QIQ+V    G    V+     GG    E  R L+ G  IV  TPGR
Sbjct: 66  PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 125

Query: 199 LIDFLEKGTTNLQRCTYLVL 258
           + D + +     +    LVL
Sbjct: 126 VFDMIRRRNLRTRSIKMLVL 145



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 21/60 (35%), Positives = 36/60 (60%)
 Frame = +3

Query: 237 AVHIFSLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 416
           ++ +  LDEAD ML+ GF+ QI  +   + P  Q ++ SAT P E+ ++   ++ D I+I
Sbjct: 139 SIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRI 198


>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 340

 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 30/59 (50%), Positives = 40/59 (67%)
 Frame = +3

Query: 234 TAVHIFSLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYI 410
           T++ I  LDEADR+LDMGF P +  IIE +  +RQTL++SAT  + VK LA   L  Y+
Sbjct: 195 TSLQILVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSATQTRSVKDLARLSLQSYV 253



 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = +1

Query: 4   TRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP-KREQARDLERGVEIV 180
           T  DG  ALV++PTRELA Q  +V    G+   +    + GG   K EQ R ++    IV
Sbjct: 118 TSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMK--TNIV 175

Query: 181 IATPGRLIDFLEKGTTNLQRCTYLVLMRL 267
           + TPGRL+  +++ T N   CT L ++ L
Sbjct: 176 VCTPGRLLQHMDE-TPNFD-CTSLQILVL 202



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
 Frame = +2

Query: 545 AKTIIFVETKRKAEPISRNIRRY--GWPAVCMHGDKTQQERAEVLYQFKEGRASILVATD 718
           +K ++FV + ++ + I    RR   G P + ++G + Q +R  +  +F +    +L ATD
Sbjct: 274 SKILVFVSSCKQVKFIYEGFRRLQPGIPLMALYGKQKQLKRVAIYDEFCKKTQCVLFATD 333

Query: 719 VAARGL 736
           +AARGL
Sbjct: 334 IAARGL 339


>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
          Length = 127

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 31/74 (41%), Positives = 50/74 (67%)
 Frame = +3

Query: 240 VHIFSLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQIN 419
           V I  LDEADRMLDMGF   IR+++ ++   RQ L++SAT+  ++K LAE  L + ++I 
Sbjct: 4   VEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIE 63

Query: 420 IGSLQLSANHNILQ 461
           + + + +A+  +LQ
Sbjct: 64  V-ARRNTASDQVLQ 76


>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
          Length = 584

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 29/67 (43%), Positives = 43/67 (64%)
 Frame = +2

Query: 554 IIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATDVAARG 733
           ++F++TK  A  +   +   G  A  +HG+ TQ +R E L +FK G   ILVATD+AARG
Sbjct: 12  LVFLQTKWMAHKLRIVLGLMGLNADELHGNLTQLQRLEALQKFKNGEVDILVATDLAARG 71

Query: 734 LDVDGIQ 754
           LD+ G++
Sbjct: 72  LDITGVK 78


>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 436

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = +1

Query: 16  GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 195
           G  A+VL PTRELA QI       G    ++   + GG    +QA  L     +VIATPG
Sbjct: 75  GIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPG 134

Query: 196 RLIDFLEK-GTTNLQRCTYLVL 258
           RL D ++   T NL++  +LVL
Sbjct: 135 RLADHIKSTDTLNLKKIQFLVL 156



 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 27/83 (32%), Positives = 42/83 (50%)
 Frame = +2

Query: 506 CLLQEIGQSQEPGAKTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFK 685
           C L  + +  +     I+F  T +  + +     + G   V +H   +Q ER   L +FK
Sbjct: 235 CYLVHLLRENDDNQSVIVFTHTCKNCQVLVSMFHKLGLTCVGLHSLLSQGERLAALARFK 294

Query: 686 EGRASILVATDVAARGLDVDGIQ 754
            G   ILVATDVA+RGLD+  ++
Sbjct: 295 SGTIKILVATDVASRGLDIPQVE 317



 Score = 39.1 bits (87), Expect = 0.004
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +3

Query: 231 LTAVHIFSLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 359
           L  +    LDEADR+LD  F   ++ I + +   RQTL++SAT
Sbjct: 148 LKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLFSAT 190


>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
          Length = 238

 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
 Frame = +1

Query: 25  ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 204
           AL+L PTRELA QI +     G    V+   + GG     QA  L +   I+IATPGRLI
Sbjct: 35  ALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLI 94

Query: 205 DFLE--KGTTNLQRCTYLVL 258
           D LE  KG  +L+   YLV+
Sbjct: 95  DHLENTKG-FSLRTLKYLVM 113


>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 439

 Score = 54.8 bits (126), Expect = 7e-08
 Identities = 29/97 (29%), Positives = 55/97 (56%)
 Frame = +3

Query: 255 LDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQ 434
           +DEAD++L M F+  + +II+ +  +RQ L++SAT+P  V+   E +L    +IN+  + 
Sbjct: 202 MDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINL--MD 259

Query: 435 LSANHNILQIVDICQEHEKENKLNVYCKKLDKVKNLV 545
               H + Q     +E +K + LN   +KL   ++++
Sbjct: 260 ELTLHGVTQYYAFVEEKQKVHCLNTLFQKLQINQSII 296



 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
 Frame = +1

Query: 25  ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-------VEIVI 183
           ALVL PTRELA Q  Q+  + G     +     GG   ++    L          V +++
Sbjct: 118 ALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIV 177

Query: 184 ATPGRLIDFLEKGTTNLQRCTYLVL 258
           ATPGR++D ++K   ++ +C  LV+
Sbjct: 178 ATPGRVLDLMKKKLADMSKCQMLVM 202


>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 439

 Score = 54.8 bits (126), Expect = 7e-08
 Identities = 29/97 (29%), Positives = 55/97 (56%)
 Frame = +3

Query: 255 LDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQ 434
           +DEAD++L M F+  + +II+ +  +RQ L++SAT+P  V+   E +L    +IN+  + 
Sbjct: 202 MDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINL--MD 259

Query: 435 LSANHNILQIVDICQEHEKENKLNVYCKKLDKVKNLV 545
               H + Q     +E +K + LN   +KL   ++++
Sbjct: 260 ELTLHGVTQYYAFVEEKQKVHCLNTLFQKLQINQSII 296



 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
 Frame = +1

Query: 25  ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-------VEIVI 183
           ALVL PTRELA Q  Q+  + G     +     GG   ++    L          V +++
Sbjct: 118 ALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIV 177

Query: 184 ATPGRLIDFLEKGTTNLQRCTYLVL 258
           ATPGR++D ++K   ++ +C  LV+
Sbjct: 178 ATPGRVLDLMKKKLADMSKCQMLVM 202


>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
          Length = 500

 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 28/83 (33%), Positives = 50/83 (60%)
 Frame = +3

Query: 255 LDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQ 434
           +DE D ML +GFE Q+++I+E++   RQT+++SAT P  ++ +A   L   + I+ GS  
Sbjct: 285 VDEVDTMLQLGFEQQVQQILERLSNRRQTMLFSATIPPSIEAMASRLLNAPVFISAGSPS 344

Query: 435 LSANHNILQIVDICQEHEKENKL 503
           L     + Q++   +E  K+ +L
Sbjct: 345 LPTK-AVKQLILWVEEKSKKKQL 366



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 9/25 (36%), Positives = 19/25 (76%)
 Frame = +1

Query: 160 ERGVEIVIATPGRLIDFLEKGTTNL 234
           E GV++++ATPGR+++ + +   +L
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDL 277


>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
          Length = 978

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 27/80 (33%), Positives = 44/80 (55%)
 Frame = +1

Query: 19  PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 198
           P A ++ P RELA QI + A    H +  R+  + GG  ++    DLE  V++++ATPG 
Sbjct: 456 PRACIVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLLVATPGT 515

Query: 199 LIDFLEKGTTNLQRCTYLVL 258
           L+ + +K        T+LV+
Sbjct: 516 LLKYRQKDRLFFSDLTHLVI 535



 Score = 32.3 bits (70), Expect(2) = 0.014
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 638 GDKTQQERAEVLYQFKEGRASILVATDVAARGLDVDGI 751
           G+   + R E   +F+   A ILV TD+A+RGLD   +
Sbjct: 728 GNSGTRIRCERFEKFQNKTADILVCTDIASRGLDTSDV 765



 Score = 23.8 bits (49), Expect(2) = 0.014
 Identities = 9/38 (23%), Positives = 23/38 (60%)
 Frame = +2

Query: 530 SQEPGAKTIIFVETKRKAEPISRNIRRYGWPAVCMHGD 643
           S+ PG +TI+F  +    + ++R++ ++    + +HG+
Sbjct: 651 SKSPG-QTIVFCNSASSCDWLARHLEQHNLSLIRLHGN 687


>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
          Length = 1238

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
 Frame = +3

Query: 255 LDEADRMLDMGFEPQIRKIIEQIRPD---RQTLMWSATWPKEVKKLAEDYLGDYIQINIG 425
           +DE DRML MG E Q+RKI+         RQTL+WSAT P+ +++LA   + + I I +G
Sbjct: 239 MDEPDRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAVLNPITIQVG 298

Query: 426 SLQLSANHNILQIVDICQEHEKENKL 503
              L A  ++ Q V     ++K  KL
Sbjct: 299 PGGLIA-PSVQQNVVFLYHYQKPQKL 323



 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 22/67 (32%), Positives = 41/67 (61%)
 Frame = +2

Query: 539 PGAKTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATD 718
           P    I+F  + +  + ++  +++  + A  +H +K Q  R +++  F++G+  ILVATD
Sbjct: 331 PYPPVIVFTSSIQNVDYVTELLKQEQFHASGLHSEKPQDYRFKLVKAFRDGKVDILVATD 390

Query: 719 VAARGLD 739
           VA+RGLD
Sbjct: 391 VASRGLD 397



 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 22/105 (20%)
 Frame = +1

Query: 10  GDGPIALVLAPTRELAQQI---------------------QQVAADFGH-TSYVRNTCVF 123
           GD P+AL+L PTREL QQ+                     Q V  D    T+  +   V 
Sbjct: 143 GDTPVALILTPTRELMQQVFMNVSEMLDVIRCPGNPGPSNQSVIYDTQQFTARYKAVAVC 202

Query: 124 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 258
           GG P   Q   L  G ++V+ATPGRL+D        L + TYLV+
Sbjct: 203 GGVPVSTQTIALREGADVVVATPGRLLD--------LYKITYLVM 239


>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1448

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 30/87 (34%), Positives = 48/87 (55%)
 Frame = +1

Query: 13  DGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 192
           +G   ++++PTREL+ Q   VA D           + GG  ++ +A  L++GV ++IATP
Sbjct: 643 NGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNLLIATP 702

Query: 193 GRLIDFLEKGTTNLQRCTYLVLMRLIV 273
           GRL+D L+    N Q   Y  L  L++
Sbjct: 703 GRLLDHLQ----NTQGFLYKNLQCLVI 725



 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 22/45 (48%), Positives = 35/45 (77%)
 Frame = +3

Query: 255 LDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 389
           +DEADR+L++GFE ++R+II  +   RQT+++SAT  K V+ LA+
Sbjct: 725 IDEADRILEIGFEEEMRQIIRILPSKRQTVLFSATQTKNVEDLAK 769



 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 21/65 (32%), Positives = 36/65 (55%)
 Frame = +2

Query: 548  KTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATDVAA 727
            K ++F  +    +  S  +     P + +HG + QQ+R    ++F   ++ IL+ TDVAA
Sbjct: 820  KVMVFFSSCNSVKYHSELLNYIDLPVLEIHGKQKQQKRTTTFFEFCNAKSGILLCTDVAA 879

Query: 728  RGLDV 742
            RGLD+
Sbjct: 880  RGLDI 884


>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
          Length = 120

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 29/61 (47%), Positives = 34/61 (55%)
 Frame = +1

Query: 19  PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 198
           P ALVL+PTRELA QIQ+V    G    V+     GG    E  R L+ G  IV  TPGR
Sbjct: 4   PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 63

Query: 199 L 201
           +
Sbjct: 64  V 64


>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
          Length = 475

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 22/68 (32%), Positives = 41/68 (60%)
 Frame = +2

Query: 548 KTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATDVAA 727
           + IIFV++ ++   +S  + +  +PA+C+H    Q+ER     QFK     +LVAT++  
Sbjct: 337 QVIIFVKSVQRCTALSHLLLKQNFPAICIHRGMKQEERLARYQQFKNFEKRMLVATNLFG 396

Query: 728 RGLDVDGI 751
           RG+D++ +
Sbjct: 397 RGMDIERV 404



 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
 Frame = +1

Query: 13  DGPIA-LVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGV-EIVI 183
           DG ++ LV+  TRELA QI +    F  + S ++    FGG   ++  + L+     IV+
Sbjct: 113 DGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVV 172

Query: 184 ATPGRLIDFLEKGTTNLQRCTYLVL 258
            TPGR++    + T NL+   + +L
Sbjct: 173 GTPGRILALTREKTLNLKHAKHFIL 197


>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 697

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 26/70 (37%), Positives = 42/70 (60%)
 Frame = +1

Query: 22  IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 201
           +AL++APTRELA Q++         + V+   + GG    +Q R L++  EIV+ATPGRL
Sbjct: 220 LALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRL 279

Query: 202 IDFLEKGTTN 231
            + + +  T+
Sbjct: 280 WELISQVFTH 289



 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 24/72 (33%), Positives = 40/72 (55%)
 Frame = +2

Query: 539 PGAKTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATD 718
           PG +T++F  T      ++  +R      + +H    Q++R + L +FK     +L+ATD
Sbjct: 456 PG-RTLVFANTIDCVRRLTSILRLVQLNPLPLHASMQQRQRLKNLDRFKASNTGLLLATD 514

Query: 719 VAARGLDVDGIQ 754
           VAARGLD+  I+
Sbjct: 515 VAARGLDIANIE 526


>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
          Length = 1058

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 20/66 (30%), Positives = 40/66 (60%)
 Frame = +2

Query: 554 IIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATDVAARG 733
           +IFV++K +A+ +   +   G     +H D+TQ +R  ++  F+ G+  +L+AT++  RG
Sbjct: 387 LIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIVKSFRTGKIWVLIATELMGRG 446

Query: 734 LDVDGI 751
           +D  G+
Sbjct: 447 IDFKGV 452



 Score = 31.9 bits (69), Expect = 0.57
 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
 Frame = +1

Query: 1   GTRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR-NTCVFGGAPKREQARDLERGVEI 177
           G +  G  A+V++PTRELAQQI +           R +      A          +  +I
Sbjct: 200 GPKKSGFRAVVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDI 259

Query: 178 VIATPGRLIDFL--EKGTTNLQRCTYLVL 258
           ++ TP RL+  L  E     L    +L+L
Sbjct: 260 LVTTPNRLVHLLTQEPPGIELHNVEWLIL 288



 Score = 31.5 bits (68), Expect = 0.76
 Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
 Frame = +3

Query: 228 QLTAVHIFSLDEADRMLDMG---FEPQIRKIIEQI-RPDRQTLMWSATWPKEVKKLAEDY 395
           +L  V    LDEAD++ + G   F  QI  I +   +PD    ++SAT    +++ A  +
Sbjct: 279 ELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPDIHRGLFSATLSNGIEEWAGLH 338

Query: 396 LGDYIQINIG 425
           L +++++ +G
Sbjct: 339 LDNHVRVTVG 348


>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
          Length = 490

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 20/66 (30%), Positives = 41/66 (62%)
 Frame = +2

Query: 554 IIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATDVAARG 733
           ++F  T+R A  ++  + + G     + G+ T ++R  VL +F+ G+  +L+ T+V+ARG
Sbjct: 348 VVFCHTRRNAAWLAEKMVKEGHAVALLSGEITIEQRIAVLERFRLGKEKLLITTNVSARG 407

Query: 734 LDVDGI 751
           +DV+ +
Sbjct: 408 IDVEQV 413



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
 Frame = +1

Query: 19  PIALVLAPTRELAQQIQQVAADFG-HTSYVR-NTCVFGGA-PKREQARDLERGVEIVIAT 189
           P  + L+PT ELA+Q  +VA   G H  +++ N  V G   P+ ++  D      I+I T
Sbjct: 174 PQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQKCTD-----HIIIGT 228

Query: 190 PGRLIDFLEK 219
           PG L+D++ K
Sbjct: 229 PGTLLDWIRK 238


>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
          Length = 428

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 22/41 (53%), Positives = 27/41 (65%)
 Frame = +1

Query: 16  GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 138
           GP AL+LAPTRELAQQI++    FG    +R   V GGA +
Sbjct: 178 GPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGADR 218



 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 23/68 (33%), Positives = 36/68 (52%)
 Frame = +2

Query: 548 KTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILVATDVAA 727
           K ++ +  K    PI   + +  + A  +HG + Q++R   L   K G   ILVATDVA 
Sbjct: 286 KKLLELLNKDLEPPIIIFVNQKKFRATTLHGGRNQEQREFALSSLKGGSKDILVATDVAG 345

Query: 728 RGLDVDGI 751
           RG+D+  +
Sbjct: 346 RGIDIKDV 353



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 24/69 (34%)
 Frame = +3

Query: 264 ADRMLDMGFEPQIRKIIE-----QIRPD-------------------RQTLMWSATWPKE 371
           ADRM+DMGFEP+++KI+E      ++PD                   RQT+M++AT P +
Sbjct: 216 ADRMIDMGFEPEVQKILEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMFTATMPPQ 275

Query: 372 VKKLAEDYL 398
           V++LA++YL
Sbjct: 276 VERLAKNYL 284


>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 985

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 20/63 (31%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = +3

Query: 237 AVHIFSLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGD--YI 410
           +V +F LDEAD++LD  F+ QI  I   +  ++Q + +SAT+P+ +    + Y+ +  ++
Sbjct: 155 SVRMFILDEADKLLDESFQQQINWIFSALPENKQMMAFSATYPEVLANHLKKYMTEPTFV 214

Query: 411 QIN 419
           ++N
Sbjct: 215 RLN 217



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = +2

Query: 587 PISRNIRRYGWPAV--CMHGDKTQQERAEVLYQFKEGRASILVATDVAARGLDVDGI 751
           P + +  R+   AV  C  G +TQ +R E + + K     IL++TD+ ARG+D + +
Sbjct: 227 PSTPDFHRFSLNAVSCCTAGSQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENV 283



 Score = 35.5 bits (78), Expect = 0.047
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +1

Query: 28  LVLAPTRELAQQIQQVAADFGHTSYVRNTC-VFGGAPKREQARDLERGVEIVIATPGRLI 204
           ++L PTRE+A Q++ V    G   Y    C VF G    E+ +   +   I + TPGR+ 
Sbjct: 85  IILTPTREIAVQVKDVICAIG-CHYDGLACKVFIGGISLEEDKKALKSCHIAVGTPGRVK 143

Query: 205 DFLEK 219
             +E+
Sbjct: 144 YLIEQ 148


>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 208

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
 Frame = +1

Query: 13  DGPIA-LVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGV-EIVI 183
           DG ++ LV+  TRELA QI +    F  + S ++    FGG   ++  + L+     IV+
Sbjct: 113 DGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVV 172

Query: 184 ATPGRLIDFLEKGTTNLQRCTYLVL 258
            TPGR++    + T NL+   + +L
Sbjct: 173 GTPGRILALTREKTLNLKHAKHFIL 197


>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 45

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +1

Query: 109 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG 222
           + C+ GG   RE    LE GV +V+ TPGR+ D + +G
Sbjct: 6   HACI-GGTNVREDRMKLEEGVHVVVGTPGRVFDMINRG 42


>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
          Length = 456

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = +1

Query: 13  DGPIALVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 189
           +GP+ L+L    +   ++  V  D   +    R   +FGG  + ++   L  G E+++AT
Sbjct: 262 NGPLVLILCTNWQNTARVYGVCEDLIRNRRRTRVQMIFGGGAEEDRIVPLINGCEVLVAT 321

Query: 190 PGRLIDFLEKGTTNLQRCTYLV 255
           P   +  L++  T+L R  ++V
Sbjct: 322 PPCFLRMLKRCYTSLDRLCHVV 343


>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
          Length = 331

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
 Frame = +3

Query: 282 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 461
           MGFE  I  I+  +   R+T ++SAT   EV+ L    L + +++ +   +L+   N+ +
Sbjct: 1   MGFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVRE-KLTKTKNVQR 59

Query: 462 IVD-------ICQEHEKENKLNVYCKKLDKVKNLV 545
                     IC+ HEK ++L  + K     KN+V
Sbjct: 60  TPSTLQNFYLICRSHEKFSQLVAFLKARKDKKNMV 94



 Score = 33.1 bits (72), Expect = 0.25
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +2

Query: 626 VCMHGDKTQQERAEVLYQFKEGRASILVATDVAARGLDV 742
           + +HG K +  R ++   F++  + ILV TDV ARG+D+
Sbjct: 119 MALHG-KMKSNRHKIFDSFRKLESGILVCTDVMARGVDI 156


>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 845

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +2

Query: 638 GDKTQQERAEVLYQFKEG-RASILVATDVAARGLDVD 745
           G  TQ+E+ EV+ +F+ G   +I++AT VA  GLD+D
Sbjct: 597 GGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDID 633


>SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 495

 Score = 36.7 bits (81), Expect = 0.020
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
 Frame = +2

Query: 467 RYLSRT*KRK*-IKCLLQEIGQSQEPGAKTIIFVETKRKAEPISRNIRRY-------GWP 622
           +YLS +   K   K L+ EI + ++ G KTII+ +T ++   +   +R         G P
Sbjct: 142 KYLSNSMDAKESFKWLVNEINERKDGGDKTIIYCQTIKQCSLVYGTLRSMLIELVANGKP 201

Query: 623 AVCM-HGDKTQQERAEVLYQFK--EGRASILVATDVAARGLDVDGI 751
            + M H    ++ +  +L  FK  +G   +LVAT     G+D  G+
Sbjct: 202 KLEMLHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGV 247


>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1258

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = +2

Query: 647  TQQERAEVLYQFKEGRASILVATDVAARGLDV 742
            +QQE+  ++ +FK+G  +IL+AT VA  GLD+
Sbjct: 983  SQQEQELIIEEFKKGVVNILIATSVAEEGLDI 1014


>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1039

 Score = 35.9 bits (79), Expect = 0.035
 Identities = 23/77 (29%), Positives = 39/77 (50%)
 Frame = +1

Query: 25  ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 204
           AL+L+PTRELA Q Q+   + G  + ++++ + GG              + V+ATPGR +
Sbjct: 354 ALILSPTRELALQTQKFIKELGRFTGLKSSVILGG--------------DSVVATPGRFL 399

Query: 205 DFLEKGTTNLQRCTYLV 255
             + +    L    Y+V
Sbjct: 400 HVVMEMELKLSSVEYVV 416



 Score = 28.7 bits (61), Expect = 5.4
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +2

Query: 677 QFKEGRASILVATDVAARGLDV 742
           +F+  +  ++V TDVAARG+D+
Sbjct: 520 KFQHKKTMVMVVTDVAARGIDI 541


>SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10)
          Length = 435

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
 Frame = +2

Query: 467 RYLSRT*KRK*-IKCLLQEIGQSQEPGAKTIIFVETKRKAEPISRNIRRY-------GWP 622
           +YLS +   K   + L+ +I + ++ G KTII+ +T ++   +   +R         G P
Sbjct: 173 KYLSNSMDAKESFEWLVNKINERKDGGDKTIIYCQTIKQCSLVYGTLRSMLIELVANGKP 232

Query: 623 AVCM-HGDKTQQERAEVLYQFK--EGRASILVATDVAARGLDVDGI 751
            + M H    ++ +  +L  FK  +G   +LVAT     G+D  G+
Sbjct: 233 KLEMLHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGV 278


>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 27

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +1

Query: 154 DLERGVEIVIATPGRLIDFL 213
           +L+RG EI++ TPGR+ID L
Sbjct: 3   ELKRGAEIIVCTPGRMIDML 22


>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
          Length = 559

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = +1

Query: 10  GDGPIALVLAPTRELA-QQIQQVAADFGHTSYVRNTCVFGGAPKREQ-ARDLERGVEIVI 183
           G G   +++ PTRELA Q + +V+   G  S V +        ++E+  +D      IVI
Sbjct: 223 GRGYGTIIVVPTRELASQMLYEVSRLLGDKSIVASFVSGVDLSRQEKLLKDSLHPPRIVI 282

Query: 184 ATPGRLIDFLEKGTTNLQRCTYLVL 258
            TP RL + +++     QR   +V+
Sbjct: 283 GTPKRLWEIVQEHEHLFQRTKRIVI 307


>SB_14172| Best HMM Match : VHP (HMM E-Value=3.8)
          Length = 83

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = -3

Query: 392 ILSKFLYFFGPSS*PHQSLSVWAYLLNDFSDLWFKSHIQHTISLI-KTKYVHRCKLVVPF 216
           +L  F Y   P+    +   +W    +DF  +W K   + +  L  KTK   + K V   
Sbjct: 4   VLLPFFYNQLPTLTAQEFFDIWVKFTSDFKVIWKKEQQRISKQLYEKTKKKLKEKQVENI 63

Query: 215 SKKSINLPGVAMTIS 171
           SKK I++ G+ + I+
Sbjct: 64  SKKPISISGLKLKIA 78


>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1281

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 17/70 (24%), Positives = 32/70 (45%)
 Frame = +2

Query: 530 SQEPGAKTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILV 709
           S E     II+  T+   + ++  + R G  A   H      +R +V  ++ EG+ +++ 
Sbjct: 244 SGEAKGSGIIYCRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVIC 303

Query: 710 ATDVAARGLD 739
           AT     G+D
Sbjct: 304 ATISFGMGVD 313


>SB_7386| Best HMM Match : Helicase_C (HMM E-Value=0.086)
          Length = 100

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 17/70 (24%), Positives = 32/70 (45%)
 Frame = +2

Query: 530 SQEPGAKTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASILV 709
           S E     II+  T+   + ++  + R G  A   H      +R +V  ++ EG+ +++ 
Sbjct: 26  SGEAKGSGIIYCRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVIC 85

Query: 710 ATDVAARGLD 739
           AT     G+D
Sbjct: 86  ATISFGMGVD 95


>SB_47383| Best HMM Match : LON (HMM E-Value=1.3)
          Length = 1528

 Score = 31.5 bits (68), Expect = 0.76
 Identities = 16/44 (36%), Positives = 28/44 (63%)
 Frame = -3

Query: 335 SVWAYLLNDFSDLWFKSHIQHTISLIKTKYVHRCKLVVPFSKKS 204
           S + Y L++F DL FK+   +T  +  TK+ + C+L+V  S++S
Sbjct: 411 SQYCYTLDEFEDLTFKT--SNTGCMYLTKFFNYCQLIVDKSQES 452


>SB_11957| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 332

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +3

Query: 294 PQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNIL 458
           P I K++E    +     W  TW K  +KL   Y G+   +  G      +HN+L
Sbjct: 263 PCISKVVELRDQEFVIKWWKGTWLKSWEKLPSQYAGNSCVLFRGQYCQYRSHNLL 317


>SB_31989| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1498

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -1

Query: 739 IKPSSCN---ISCYKNTSTTFLELIQNFSSFLLSFIAM 635
           + P  CN   ++ YKN ST F+E I N  S  L    M
Sbjct: 238 LSPGGCNCHLVTIYKNHSTLFIEAIPNIQSQRLGIFLM 275


>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
          Length = 210

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 237 AVHIFSLDEADRMLDMGFEPQIRKIIEQIRPDRQ 338
           ++ +  LDEAD ML+ GF+ QI  +   + P  Q
Sbjct: 35  SIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68


>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
          Length = 1366

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 20/77 (25%), Positives = 30/77 (38%)
 Frame = +2

Query: 524  GQSQEPGAKTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVLYQFKEGRASI 703
            G    PG K       KRK +P+   +    W A   H   +  +R +V  +F  G    
Sbjct: 788  GSDVTPGKKG---ANKKRKKQPVRAPL---SWEAESYHAGMSAAQRRKVQKRFMSGELRA 841

Query: 704  LVATDVAARGLDVDGIQ 754
            + AT     GLD   ++
Sbjct: 842  VAATVAFGMGLDKSDVR 858


>SB_53151| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 490

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
 Frame = +3

Query: 210 LGKGHNQLTAVHIFSLDEADRMLDMG-FEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 386
           L KG+  L   H+F L +  R +D G + PQ       IR     LM   T  K   +L 
Sbjct: 130 LVKGNTGLELCHLFDLSKPQRSIDKGVYHPQATSSARAIRV--LNLMLDIT-SKHKHRLG 186

Query: 387 EDYLGDYIQINIG-SLQLSANHNILQIV 467
           + Y   + Q+++  S+  S + ++ Q V
Sbjct: 187 QRYTRLFNQLSVSQSVSQSVSQSVSQSV 214


>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
          Length = 282

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +2

Query: 647 TQQERAEVLYQFKEGRASILVATDVAARGLDV 742
           T+QE+  VL  F++ + ++LVAT V   GLDV
Sbjct: 131 TKQEK--VLKMFRKHQINLLVATSVVEEGLDV 160


>SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)
          Length = 895

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 255 LDEADRMLDMGFEPQIRKIIEQIR 326
           LDEAD+M+D  F    R+++E I+
Sbjct: 388 LDEADKMIDAYFREMQRRLMEDIK 411


>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
          Length = 651

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +2

Query: 542 GAKTIIFVETKRKAEPISRNIRRYGWPAVCMHGDKTQQERAEVL 673
           G   II+  +++ AE ++  +   G  A C H D   + R++V+
Sbjct: 313 GDSGIIYCFSRKDAEQVAIEMSSRGIKAACYHADMPPESRSQVV 356


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,364,267
Number of Sequences: 59808
Number of extensions: 493544
Number of successful extensions: 1357
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1341
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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