Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0079
(449 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 125 1e-29
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 125 2e-29
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 124 5e-29
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 109 1e-24
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 1e-20
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 91 5e-19
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 72 3e-13
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 71 3e-13
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 71 3e-13
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 71 3e-13
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 8e-13
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 1e-12
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 1e-12
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 45 3e-05
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 41 4e-04
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 40 0.001
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 40 0.001
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.007
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 34 0.047
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.25
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 1.3
SB_47472| Best HMM Match : zf-CXXC (HMM E-Value=5.9) 27 7.2
SB_34195| Best HMM Match : Init_tRNA_PT (HMM E-Value=2.7) 27 7.2
SB_31378| Best HMM Match : Herpes_UL55 (HMM E-Value=4.5) 27 7.2
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 27 9.5
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 125 bits (302), Expect = 1e-29
Identities = 55/61 (90%), Positives = 59/61 (96%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+VYYNEA+GGKYVPRAV+VDL PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN AKGHYT
Sbjct: 261 NVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 320
Query: 434 D 436
+
Sbjct: 321 E 321
Score = 96.3 bits (229), Expect = 1e-20
Identities = 43/47 (91%), Positives = 43/47 (91%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERI
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERI 260
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 125 bits (301), Expect = 2e-29
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+VYYNEA+GGKYVPRA++VDL PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN AKGHYT
Sbjct: 48 NVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 434 D 436
+
Sbjct: 108 E 108
Score = 96.3 bits (229), Expect = 1e-20
Identities = 43/47 (91%), Positives = 43/47 (91%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERI
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERI 47
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 124 bits (298), Expect = 5e-29
Identities = 53/61 (86%), Positives = 59/61 (96%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+VYYNEA+GGKYVPR+V++DL PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN AKGHYT
Sbjct: 48 NVYYNEATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 434 D 436
+
Sbjct: 108 E 108
Score = 93.9 bits (223), Expect = 6e-20
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 254
MREIV +QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERI
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERI 47
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 109 bits (261), Expect = 1e-24
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2
Query: 281 GKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYTD 436
GKYVPRAV+VDL PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN AKGHYT+
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 53
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 96.3 bits (229), Expect = 1e-20
Identities = 43/47 (91%), Positives = 43/47 (91%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERI
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERI 47
Score = 93.9 bits (223), Expect = 6e-20
Identities = 40/45 (88%), Positives = 44/45 (97%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVF 388
+VYYNEA+GGKYVPRA++VDL PGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 48 NVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 90.6 bits (215), Expect = 5e-19
Identities = 37/54 (68%), Positives = 46/54 (85%)
Frame = +2
Query: 275 SGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYTD 436
+GG+YVPR+++VDL PGTMD+VR GP G +FRPDNFV QSGA NN AKGHY++
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSE 64
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 71.7 bits (168), Expect = 3e-13
Identities = 27/60 (45%), Positives = 41/60 (68%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+ +++E GK+VPRAV VDL P +D +R+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 468 NTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYT 527
Score = 69.3 bits (162), Expect = 1e-12
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+ +++E GK+VPRAV DL P +D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 35 NTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 94
Score = 35.9 bits (79), Expect = 0.015
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 117 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
RE V I GQ G Q+G WE+ EHGI G D +
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 460
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 71.7 bits (168), Expect = 3e-13
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+ +++E GK+VPRAV VDL P +D VR+G + Q+F P+ V G+ A NN A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYT 109
Score = 71.3 bits (167), Expect = 3e-13
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+ +++E GK+VPRAV VDL P +D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 483 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 542
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
MRE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 117 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 475
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 71.3 bits (167), Expect = 3e-13
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+ +++E GK+VPRAV VDL P +D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 49 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 108
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 117 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 41
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 71.3 bits (167), Expect = 3e-13
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+ +++E GK+VPRAV VDL P +D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 114 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 173
Score = 71.3 bits (167), Expect = 3e-13
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+ +++E GK+VPRAV VDL P +D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 635 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 694
Score = 37.1 bits (82), Expect = 0.007
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 111 IMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
+ RE + + GQ G QIG WE+ EHGI G D +
Sbjct: 64 LQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 106
Score = 37.1 bits (82), Expect = 0.007
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
+RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 627
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 117 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 554
Score = 32.7 bits (71), Expect = 0.14
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSV 340
+ +++E GK+VPRAV VDL P + +
Sbjct: 562 NTFFSETGAGKHVPRAVFVDLEPTVRECI 590
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 71.3 bits (167), Expect = 3e-13
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+ +++E GK+VPRAV VDL P +D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 109
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
MRE + I GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 70.1 bits (164), Expect = 8e-13
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+ ++ E GK+VPRAV VDL P +D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 421 NTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 480
Score = 69.7 bits (163), Expect = 1e-12
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+ +++E GK+VPRAV DL P +D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 854 NTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 913
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 117 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 413
Score = 35.1 bits (77), Expect = 0.027
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 117 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
RE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 846
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 69.3 bits (162), Expect = 1e-12
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+ +++E GK+VPRAV DL P +D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 50 NTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 109
Score = 37.1 bits (82), Expect = 0.007
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
MRE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 69.3 bits (162), Expect = 1e-12
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +2
Query: 266 NEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+EA+ GKYVPRAV+VDL P +D VR+G + ++ P+ + G+ A NN A+GHYT
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYT 1020
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 68.9 bits (161), Expect = 2e-12
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+ ++ E GK+VPRAV VDL P +D +R+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 15 NTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYT 74
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+ +++E GK+VPRAV VDL P + P+ + G+ A NN A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYT 99
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 230
MRE + I GQ G QIG WE+ EHGI G D
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD 39
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 43.6 bits (98), Expect = 8e-05
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 332 DSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 46
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 41.1 bits (92), Expect = 4e-04
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 338 VRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYT 34
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 41.1 bits (92), Expect = 4e-04
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 338 VRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYT 34
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 338 VRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
VR G + +F PD + G+ A NN A+GHYT
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYT 34
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 338 VRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+R+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYT 34
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
MRE + + GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
Score = 35.5 bits (78), Expect = 0.020
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVR 343
+ +++E GGK+VPRAV VDL P + ++
Sbjct: 50 NTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 230
MRE + I GQ G QIG WE+ EHGI G D
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSD 234
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 34.3 bits (75), Expect = 0.047
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 296 RAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 412
RAV++D+ G ++++ GP +F + SG GNN
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNN 114
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 32.7 bits (71), Expect = 0.14
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 171 FWEVISDEHGIDATGAYSG-DSDLQLERI 254
FWEVI++EHGID G + S +Q +R+
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRL 29
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 31.9 bits (69), Expect = 0.25
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 123 IVHIQAGQCGNQIGAKFWEVISDE 194
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -3
Query: 402 APDCPKTKLSGRKICPNGPERTESMVPGSRSTITAR----GTYXP 280
A DCP ++ +GR +CP P +S + ++++I GT+ P
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKASIEVNDFTLGTHTP 182
>SB_47472| Best HMM Match : zf-CXXC (HMM E-Value=5.9)
Length = 433
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 409 IPRPRLSEDEVVRSEDLPKRPGTDGVHGSRXKVH 308
+P P S+++ +SE + RPG D SR VH
Sbjct: 64 LPPPLYSQNDHQKSEHILLRPGVDLKTASRCTVH 97
>SB_34195| Best HMM Match : Init_tRNA_PT (HMM E-Value=2.7)
Length = 597
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 401 PQTVRRRSCPVGRFAQTARN 342
P +R SCPVGR AQ +R+
Sbjct: 404 PNKKKRESCPVGRGAQFSRS 423
>SB_31378| Best HMM Match : Herpes_UL55 (HMM E-Value=4.5)
Length = 690
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -1
Query: 407 SPPQTVRRRSCPVGRFAQTARNGRSPWFQXQGPPSQLAGRTXPLKLRYSRHDAFKLQVGV 228
SP Q+ R++ R A RS W Q P+Q R L LR + F Q G+
Sbjct: 119 SPAQSDIRQTLLPLRVASDKPFSRSEWHQTNPSPAQSGIRQTLLPLRGASDKPFSAQSGI 178
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -1
Query: 407 SPPQTVRRRSCPVGRFAQTARNGRSPWFQXQGPPSQLAGRTXPLKLRYSRHDAFKLQVGV 228
SP Q+ R++ R A RS W Q P+Q R L LR + F Q G+
Sbjct: 374 SPAQSDIRQTLLPLRVASDKPFSRSEWHQTNPSPAQSGIRQTLLPLRGASDKPFSAQSGI 433
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 108 AIMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYS 224
A +RE++ +Q G N +G +W + DA S
Sbjct: 25 ATVREVITLQFGHYANFVGTHWWNIQESSFCYDAASPKS 63
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -3
Query: 393 CPKTKLSGRKICPNGPERTESMVPGSRSTITARGTYXPPEA 271
CP+ + RK P+G + + G+ S + ++G PP A
Sbjct: 456 CPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,566,693
Number of Sequences: 59808
Number of extensions: 290897
Number of successful extensions: 787
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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