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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0062.Seq
         (512 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)                     150   8e-37
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)             112   1e-25
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)                      66   2e-11
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)              62   3e-10
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)                 60   8e-10
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)               59   2e-09
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)                58   6e-09
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)                  54   5e-08
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)                54   9e-08
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)                 53   2e-07
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)                      53   2e-07
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)                52   3e-07
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)                46   2e-05
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)                42   2e-04
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.001
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.002
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)                  38   0.006
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.008
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)                   35   0.045
SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0)              35   0.045
SB_43455| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.10 
SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)                 33   0.14 
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)                    33   0.14 
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)                       33   0.14 
SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.56 
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   1.3  
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.7  
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.7  
SB_31737| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.9  
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.9  
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)                   27   6.9  
SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.1  
SB_39674| Best HMM Match : Recep_L_domain (HMM E-Value=7.1)            27   9.1  

>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 1282

 Score =  150 bits (363), Expect = 8e-37
 Identities = 61/79 (77%), Positives = 69/79 (87%)
 Frame = +1

Query: 22   EEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 201
            EEPVEGF V++  E N FEW+VAIFGPP TLY GGYFKAHM FP DYPYSPP+ RFLTK+
Sbjct: 1138 EEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKM 1197

Query: 202  WHPNVYENGDLCISILHPP 258
            WHPN+YE+GD+CISILHPP
Sbjct: 1198 WHPNIYESGDVCISILHPP 1216



 Score =  132 bits (320), Expect = 1e-31
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = +3

Query: 252  PPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKD 431
            PPVDDPQSGELP ERWNPTQ+VRT+LLSVISLLNEPNTFSPANVDASVM+R+WR++KGKD
Sbjct: 1215 PPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRETKGKD 1274

Query: 432  KEYENII 452
             EYE II
Sbjct: 1275 SEYEKII 1281


>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 473

 Score =  112 bits (270), Expect = 1e-25
 Identities = 41/80 (51%), Positives = 62/80 (77%)
 Frame = +1

Query: 19  REEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTK 198
           +++PVEGF   L  +++L++WE+ + GPP T Y+ GYFKA M FP +YP  PP++ F++ 
Sbjct: 345 QKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISD 404

Query: 199 VWHPNVYENGDLCISILHPP 258
           +WHPNV++NG++CISILH P
Sbjct: 405 IWHPNVHKNGEVCISILHEP 424



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 26/47 (55%), Positives = 32/47 (68%)
 Frame = +3

Query: 255 PVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASV 395
           P +D    E   ERW P  +V T++LSVIS+L EPN  SPANVDA+V
Sbjct: 424 PGEDKYGYEKADERWRPIHTVETIMLSVISMLAEPNDESPANVDAAV 470


>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 145

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 29/79 (36%), Positives = 44/79 (55%)
 Frame = +1

Query: 19  REEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTK 198
           R+   + FR   + E N+  W+  I  P    Y  G F+  + FP +YP+ PP I F TK
Sbjct: 6   RKSGTKTFRDVKVDESNILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFKTK 64

Query: 199 VWHPNVYENGDLCISILHP 255
           ++HPN+ E G +C+ I+ P
Sbjct: 65  IYHPNIDEKGQVCLPIISP 83


>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 385

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 28/65 (43%), Positives = 36/65 (55%)
 Frame = +1

Query: 61  EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
           EDNLFEW   + GPPDT + GG +   +  PP+YP  PPSI  LT      + +   L +
Sbjct: 35  EDNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLTPNGRFEIGKKICLSM 94

Query: 241 SILHP 255
           S  HP
Sbjct: 95  SAHHP 99



 Score = 27.5 bits (58), Expect = 6.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 291 ERWNPTQSVRTVLLSVISLL 350
           E W P+ S+RTVL+++I  +
Sbjct: 100 ETWQPSWSIRTVLMAIIGFM 119


>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
          Length = 123

 Score = 60.5 bits (140), Expect = 8e-10
 Identities = 25/47 (53%), Positives = 30/47 (63%)
 Frame = +1

Query: 64  DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW 204
           DNLFEW   + GPPDT + GG +   +  PP+YP  PPSI  LT VW
Sbjct: 1   DNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT-VW 46


>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 151

 Score = 58.8 bits (136), Expect = 2e-09
 Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
 Frame = +1

Query: 61  EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTK-----VWHPNVYEN 225
           +D++ +    I GP DT Y+GG+F   ++ PPDYP  PP ++ +T       ++PN+Y N
Sbjct: 7   KDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLYRN 66

Query: 226 GDLCISIL 249
           G +C+SI+
Sbjct: 67  GKVCLSII 74


>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
          Length = 190

 Score = 57.6 bits (133), Expect = 6e-09
 Identities = 21/56 (37%), Positives = 33/56 (58%)
 Frame = +1

Query: 91  IFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPP 258
           + G   T Y  G FK  ++ P  YP+ PP +RF+T ++HPN+  +G +C+  L  P
Sbjct: 2   LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMP 57



 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 285 PCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDAS 392
           P   W P  ++ +VL +++ L+ EPN   P   + S
Sbjct: 58  PKGMWKPALNISSVLSTILILMAEPNPDDPLMAEIS 93


>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
          Length = 215

 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
 Frame = +1

Query: 61  EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNV-YENGDLC 237
           EDN+ E+E+ I  P D  Y+GG FK  +K   DYP +PP  R +  ++HPN+  ++G +C
Sbjct: 33  EDNMEEFELQIT-PTDGAYRGGQFKFSVK-TEDYPNTPPVPRCVNNIYHPNMDLDDGSVC 90

Query: 238 ISIL 249
           +S+L
Sbjct: 91  LSLL 94


>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
          Length = 181

 Score = 53.6 bits (123), Expect = 9e-08
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = +1

Query: 64  DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSI 183
           D L+EW   I GPP ++Y+GG F   + FP DYP+ PP +
Sbjct: 49  DKLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV 88


>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
          Length = 200

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 19/38 (50%), Positives = 26/38 (68%)
 Frame = +1

Query: 64  DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPP 177
           D+L+EW   I GPP ++Y+GG F   + FP DYP+ PP
Sbjct: 162 DDLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPP 199


>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 226

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 19/38 (50%), Positives = 26/38 (68%)
 Frame = +1

Query: 64  DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPP 177
           D+L+EW   I GPP ++Y+GG F   + FP DYP+ PP
Sbjct: 122 DDLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPP 159



 Score = 29.1 bits (62), Expect = 2.2
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +3

Query: 234 LHIDSPPPVDDPQSG---ELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMY 401
           +H  S  P   P+     ++  + W+P  ++  VLLS+ SLL + N   P     + +Y
Sbjct: 148 IHFPSDYPFKPPKGMVCLDILKDSWSPALTISKVLLSICSLLTDCNPADPLVGSIAALY 206


>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
          Length = 243

 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 27/63 (42%), Positives = 39/63 (61%)
 Frame = +1

Query: 61  EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
           EDN+ E+E+ I  P D  Y+GG FK  ++   DYP   PSI   TK++HPN+     +C+
Sbjct: 33  EDNMEEFELQIT-PTDGAYRGGQFKFSVR-TTDYPNVAPSINCKTKIYHPNMDGYDGVCM 90

Query: 241 SIL 249
           S+L
Sbjct: 91  SLL 93


>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
          Length = 739

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
 Frame = +1

Query: 79  WEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV---WHPNVYENGDLCIS 243
           + V I GP  T Y  G F   +  P +YP +PPS  +L+      +PN+YE+G +CI+
Sbjct: 636 FRVMIEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCIT 693


>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
          Length = 204

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 145 KFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPP 258
           K     P+ PP +RF+T ++HPN+  +G +C+  L  P
Sbjct: 34  KLEASTPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMP 71



 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 285 PCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDAS 392
           P   W P  ++ +VL +++ L+ EPN   P   + S
Sbjct: 72  PKGMWKPALNISSVLSTILILMAEPNPDDPLMAEIS 107


>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 710

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 21/50 (42%), Positives = 27/50 (54%)
 Frame = +1

Query: 46  VKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLT 195
           V +LG   L E+ V  FGP  T Y+GG +K  +  P  YP+  PSI   T
Sbjct: 41  VTILG--GLNEFIVKFFGPVGTPYEGGVWKVRVDLPEKYPFKSPSIANFT 88


>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 269

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = +1

Query: 187 FLTKVWHPNVYENGDLCISILHPPW 261
           FLTK++HPNV +NG++C++ L   W
Sbjct: 147 FLTKIFHPNVAKNGEICVNTLKKDW 171



 Score = 29.9 bits (64), Expect = 1.3
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +3

Query: 297 WNPTQSVRTVLLSVISLLNEPNTFSPANVDA-SVMYRRWRDSKGKDKEYENIIRK 458
           W P   ++ VLL+V  LL  PN  S  N +A  ++  R+ D   + K +  I  K
Sbjct: 171 WKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSKRAKMFTEIHAK 225


>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
          Length = 841

 Score = 37.5 bits (83), Expect = 0.006
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = +1

Query: 19  REEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPP 177
           R +   G +V+L+ E    + +  I GPP+T ++GG +   +  P  YP++PP
Sbjct: 670 RLDQKSGIKVELVDE-TFTKLKGEIRGPPETPFEGGTYNLDIVIPETYPFNPP 721


>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 897

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
 Frame = +1

Query: 55  LGEDNLFEWEVAI--FGPPDTLYQ------GGYFKAHMKFPPDYPYSPPSIRFLT-KVWH 207
           L +DNLFEW V +        LY+        +   ++ FP ++P++PP +R L  ++  
Sbjct: 758 LVDDNLFEWNVKLHTIDGDSLLYRDMVETGSKFILLNITFPENFPFAPPFMRVLAPRIEG 817

Query: 208 PNVYENGDLCISILHP 255
             V + G +C+ +L P
Sbjct: 818 GFVLDGGAICMELLTP 833


>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
          Length = 48

 Score = 34.7 bits (76), Expect = 0.045
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 294 RWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
           +W+P   +RTVLLS+ +LL+ PN   P   D +  ++
Sbjct: 2   KWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 38


>SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0)
          Length = 446

 Score = 34.7 bits (76), Expect = 0.045
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = +3

Query: 279 ELPCERWNPTQSVRTVLLSVISLL 350
           E   ERW+P QSV  +LLSVIS+L
Sbjct: 4   ESSAERWSPVQSVEKILLSVISML 27


>SB_43455| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 924

 Score = 33.5 bits (73), Expect = 0.10
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = +1

Query: 115 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPWMILS--LANCP 288
           YQ  + + ++  P      P  IRF+  V HP+   N  LC  I+ P W I+   L +C 
Sbjct: 46  YQDWFHRMYLSSPESRSLIPDLIRFIVGVVHPS---NEVLCSDII-PRWAIIGWLLTSCQ 101

Query: 289 ANVGTLHNRFA 321
             V + +++ A
Sbjct: 102 TAVASANSKLA 112


>SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)
          Length = 1604

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = -2

Query: 148 ISCVP*SIHLDKVYPAVRRLPLPTQIDCPLLAI*H 44
           ++C+P  + L++  PAV RLP P  ++ P+ A+ H
Sbjct: 471 VTCLPTHLPLERPVPAVTRLPTPLPLERPVPAVTH 505



 Score = 28.3 bits (60), Expect = 3.9
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -2

Query: 148 ISCVP*SIHLDKVYPAVRRLPLPTQIDCPLLAI*H 44
           ++ +P  + L++  PAV RLP P  ++ P+ A+ H
Sbjct: 503 VTHLPTDLPLERPVPAVTRLPTPLLLERPVPAVTH 537



 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 148 ISCVP*SIHLDKVYPAVRRLPLPTQIDCPLLAI 50
           ++C+P  + L +  PAV RLP    ++ P+ A+
Sbjct: 311 VTCLPTHLPLQRPLPAVTRLPTHLPLEQPVPAV 343


>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
          Length = 55

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 91  IFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLT 195
           + GP DT Y  G F   + FP  YP  PP ++ +T
Sbjct: 12  VTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLIT 46


>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
          Length = 609

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +2

Query: 101 RRIHFIKVD-TSRHT*NSPLTTRIHHHPLG 187
           R+IH I VD T RH   SPL+ ++ HHP G
Sbjct: 39  RQIHAIAVDGTRRHANASPLSCQLLHHPTG 68


>SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 178

 Score = 31.1 bits (67), Expect = 0.56
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 160 YPYSPPSIRFLTKVWHPNVYENG 228
           +P S P ++F + V+HP ++ENG
Sbjct: 118 FPDSRPLVKFTSNVFHPQIHENG 140


>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2670

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 290 RTLEPYTIGSHRTPLCNLTPQRAEHLQSGER 382
           RT  P  I SH  P C+L+P    H+ S  R
Sbjct: 441 RTTPPQLIPSHHPPYCSLSPLNNLHIYSATR 471


>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 79

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +1

Query: 109 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGD 231
           T+++   +   +   P+YP  PP+++F++K+    V   G+
Sbjct: 1   TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKGE 41


>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 41

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +1

Query: 109 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGD 231
           T+++   +   +   P+YP  PP+++F++K+    V   G+
Sbjct: 1   TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKGE 41


>SB_31737| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 242

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1

Query: 199 VWHPNVYENGDLCISILHPPWMILSLANC 285
           V  PN   NG  C  IL PP   L+L +C
Sbjct: 142 VCRPNYKGNGIFCAGILSPPSQALTLYHC 170


>SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1390

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +1

Query: 94   FGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPP 258
            F PP   YQ G       FPP     PP+++F  +V+HP +  + D C+ +   P
Sbjct: 1049 FPPPPPPYQTG--SPIRAFPP-----PPAVKFGGQVYHPAMLHDYD-CVRVRRYP 1095


>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4856

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 302  PYTIG--SHRTPLCNLTPQRAEHLQSGERRCKRDVPPLA 412
            P +IG  SHRT    ++PQ  + +++ E     DVPPLA
Sbjct: 4324 PLSIGKTSHRTGASKISPQMTQQVEADE---IYDVPPLA 4359


>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
          Length = 2748

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 67  NLFEWEVAIFGPPDTLYQG 123
           N + +  +IFGPP  LYQG
Sbjct: 936 NHYPYSSSIFGPPQALYQG 954


>SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1430

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 369 SPANVDASVMYRRWRDSKGKDKEYENIIRKQAQVARMEAEK 491
           S A   +  +  R+  S+      EN +RK+ +VAR+EA+K
Sbjct: 18  SEAVTPSGSLTSRYAASEESRAAKENFLRKEREVARIEAKK 58


>SB_39674| Best HMM Match : Recep_L_domain (HMM E-Value=7.1)
          Length = 390

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVD 386
           E+WNP++S  T      +L N   T SP  ++
Sbjct: 259 EKWNPSESQETSQQYYYALANSDLTLSPVGIN 290


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,904,435
Number of Sequences: 59808
Number of extensions: 413964
Number of successful extensions: 1078
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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