Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0055.Seq
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 100 2e-21
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 39 0.004
SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45) 37 0.018
SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10) 37 0.018
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 36 0.032
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 35 0.055
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 34 0.13
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 34 0.13
SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 34 0.13
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 34 0.13
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 34 0.13
SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17) 33 0.17
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 33 0.17
SB_5526| Best HMM Match : zf-C3HC4 (HMM E-Value=2) 33 0.17
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 33 0.22
SB_19774| Best HMM Match : WWE (HMM E-Value=5.4e-24) 33 0.29
SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 32 0.39
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 32 0.39
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 32 0.39
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 32 0.39
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 32 0.39
SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15) 32 0.39
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 32 0.39
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 32 0.51
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18) 32 0.51
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 32 0.51
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 32 0.51
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 32 0.51
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 32 0.51
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 32 0.51
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 32 0.51
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 32 0.51
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 32 0.51
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 32 0.51
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) 31 0.68
SB_11151| Best HMM Match : Neur_chan_memb (HMM E-Value=3.6e-10) 31 0.68
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_14518| Best HMM Match : MIB_HERC2 (HMM E-Value=2.4e-38) 31 0.90
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 31 0.90
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 31 0.90
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 30 2.1
SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15) 30 2.1
SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06) 30 2.1
SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 30 2.1
SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 29 3.6
SB_7039| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28) 29 3.6
SB_384| Best HMM Match : IBR (HMM E-Value=1.1e-12) 29 3.6
SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 28 6.3
SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 28 6.3
SB_34455| Best HMM Match : Herpes_UL3 (HMM E-Value=1.8) 28 6.3
SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 28 6.3
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_19615| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_14081| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 28 6.3
SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09) 28 6.3
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 28 6.3
SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10) 28 8.4
SB_38475| Best HMM Match : ASC (HMM E-Value=3.1e-14) 28 8.4
SB_11435| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 99.5 bits (237), Expect = 2e-21
Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 5/102 (4%)
Frame = +2
Query: 218 FLFSLCEGCSSSSRKCAMCRTEIPLDYFENPVLL-----DKSNLQYAANVDGVEGFQWYY 382
F F +G + SRKCA+CR I DY + P L+ S+ A + + + W+Y
Sbjct: 90 FCFLCIKGVALRSRKCAICRQPISPDYLDKPTLVKVVSGQSSSSDKAPSDPPADEYVWFY 149
Query: 383 EGRNGWWKYDERSNSELENAFNNGESECTLLLAGTLYIVDFQ 508
EGRNGWW+YD +++ E+E+AF G+ CTLL+AG LY++DF+
Sbjct: 150 EGRNGWWQYDTKTSKEVESAFKGGKRSCTLLIAGFLYLIDFE 191
Score = 59.3 bits (137), Expect = 3e-09
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +3
Query: 135 IFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVA 248
IF + + DC VCLQ+ +P +L CGH+FCFLC+KGVA
Sbjct: 62 IFELDYQPDCPVCLQQASYPVRLPCGHMFCFLCIKGVA 99
>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 38.7 bits (86), Expect = 0.004
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVA 248
E +C +CL++ + P L C H FC+ C+ G+A
Sbjct: 13 EVECPICLERFKDPRVLPCLHTFCYECLVGLA 44
>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
Length = 203
Score = 38.7 bits (86), Expect = 0.004
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVA 248
E +C +CL++ + P L C H FC+ C+ G+A
Sbjct: 13 EVECPICLERFKDPRVLPCLHTFCYECLVGLA 44
>SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQA 257
C VCL + ++P L C H FC CV+ + HQ+
Sbjct: 20 CPVCLGEYKNPMLLRCYHSFCLRCVQELLHQS 51
>SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)
Length = 784
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAEN 263
C VC Q+ P L C H FC C++G+A + E+
Sbjct: 62 CRVCNQRFNKPKLLHCLHSFCQSCIEGLARKTED 95
>SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10)
Length = 337
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAENVQC 272
++ C +CLQ P L C H FC +C +A N+QC
Sbjct: 34 DFTCPICLQLLVEPVVLPCEHEFCKMCFTQNVQEA-NLQC 72
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 35.9 bits (79), Expect = 0.032
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKGVAH--QAENVQC 272
C +CL++ Q P L+C H +C C++ +A Q +++ C
Sbjct: 16 CCLCLEQYQDPRVLACLHTYCRHCLESLAEHSQGDSISC 54
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 35.1 bits (77), Expect = 0.055
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCV 236
E++C +C + +P CGHVFC C+
Sbjct: 376 EFECTLCCRLFYNPVTTPCGHVFCRACL 403
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAENVQC 272
++ C +C + P +CGHVFC C+ V AEN C
Sbjct: 54 DFKCGICFGVLEDPLVTTCGHVFCSQCL--VHWIAENGTC 91
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKG-VAH-QAENVQC 272
C++CL++ Q P L+C H +C C++ V H Q V C
Sbjct: 17 CSLCLEQYQDPRVLACLHTYCRHCLESLVEHSQERTVSC 55
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKG-VAHQAE-NVQC 272
C++CL++ Q P L+C H +C C++ V H E V C
Sbjct: 26 CSLCLEQYQDPRVLACLHTYCRHCLESLVEHSKECTVSC 64
>SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 33.9 bits (74), Expect = 0.13
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 141 SHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCV 236
S N ++C +CL + CGH+FC+ C+
Sbjct: 56 SANANFECNICLDTARDAVISMCGHLFCWPCL 87
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 239
E C+VCL++ + P L C H FC C++
Sbjct: 19 ELTCSVCLEQFREPKMLPCFHTFCKECLE 47
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 114 VLKHAVLIFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCVKGV 245
++ + + S + +C +CL P+ C HVFC C+ V
Sbjct: 49 LINQLLQVLSSGVSEECPICLDPLDDPSITRCAHVFCTGCLTDV 92
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKG-VAH-QAENVQC 272
C++CL++ Q P L+C H +C C++ V H Q V C
Sbjct: 17 CSLCLEQYQDPRVLACLHTYCRHCLESLVEHSQERTVSC 55
>SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17)
Length = 455
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCLHCLEELAVHSE 47
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKG-VAHQAE-NVQC 272
C +CL++ Q P L+C H +C C++ V H E V C
Sbjct: 16 CCLCLEQYQDPRVLACLHTYCRHCLESLVEHSKECTVSC 54
>SB_5526| Best HMM Match : zf-C3HC4 (HMM E-Value=2)
Length = 106
Score = 33.5 bits (73), Expect = 0.17
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 156 YDCAVCLQKCQHPTKLSCGHVFCFLCVK 239
+ C++C + P + +C HVFC+ C+K
Sbjct: 79 HQCSICSEPPTAPHQGACEHVFCYYCIK 106
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQA 257
E CA+C++ P L C H FC C++ +A +
Sbjct: 12 EVTCAICIEHFTDPRLLPCLHTFCRHCLEDLAEHS 46
>SB_19774| Best HMM Match : WWE (HMM E-Value=5.4e-24)
Length = 729
Score = 32.7 bits (71), Expect = 0.29
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Frame = +2
Query: 299 FENPVLLDKSNLQYAANVDGVEGFQWYYEGRNGWWKYDERSNSELENAFNNGESECTLLL 478
F LL+KS L+ + +QW + R W Y +E AF +GE E +L
Sbjct: 78 FSVDALLNKSQLRTEHGL-----WQWR-DDRGTWHSYSWIDCKIIEAAFQSGEDELSLST 131
Query: 479 AGTLYIVDFQ--Q*LN---SVEVIILAAAGAKEYPPVTCQRNS 592
G Y +DF Q +N I AGA E +T Q S
Sbjct: 132 MGRSYTIDFNALQQINEDTGTTRPIQRCAGAGESTSLTLQSGS 174
>SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 442
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSE 47
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKG-VAHQAE-NVQC 272
C++CL + Q P L+C H +C C++ V H E V C
Sbjct: 17 CSLCLGQYQDPRVLACLHTYCRHCLESLVEHSKECTVSC 55
>SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 291
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSE 47
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSE 47
>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 82
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSE 47
>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 745
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSE 47
>SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)
Length = 405
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 11 EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSE 46
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVTCSICIEHLNDPRVLPCLHSFCRHCLEELAVHSE 47
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSE 47
>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
Length = 355
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVRCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSE 47
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 31.9 bits (69), Expect = 0.51
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 156 YDCAVCLQKCQHPTKLSCGHVFCFLCVK 239
++C +C P + CGH +C C+K
Sbjct: 20 FECGLCGDFYVDPVTILCGHTYCLACIK 47
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCV-KGVAHQAENVQCVA 278
+++C +C P CGH FC C+ + + H+ E C A
Sbjct: 327 DFECKLCFNLLLEPVTSLCGHSFCRDCLYRSLDHRVECPCCRA 369
>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 31.9 bits (69), Expect = 0.51
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCV 236
CA+C + P C H FC LC+
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCI 184
>SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1257
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLS-CGHVFCFLCV 236
C +C + +PT LS CG+VFC+ C+
Sbjct: 1201 CPLCAKVRTNPTALSTCGYVFCYPCI 1226
>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 262
Score = 31.9 bits (69), Expect = 0.51
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCV 236
CA+C + P C H FC LC+
Sbjct: 34 CAICKEVLTQPIATPCDHYFCVLCI 58
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 31.9 bits (69), Expect = 0.51
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 159 DCAVCLQKCQHPTKLS-CGHVFCFLCV 236
+C +CL+ +P L CGH FC C+
Sbjct: 677 ECPICLETITYPETLQGCGHTFCRPCI 703
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSE 47
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSE 47
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 17 EVTCSICIEHFDDPRVLPCLHSFCRHCLEELAVHSE 52
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 31.9 bits (69), Expect = 0.51
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 159 DCAVCLQKCQHPTKLS-CGHVFCFLCV 236
+C +CL+ +P L CGH FC C+
Sbjct: 752 ECPICLETITYPETLQGCGHTFCRPCI 778
>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 31.9 bits (69), Expect = 0.51
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCV 236
CA+C + P C H FC LC+
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCI 184
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSE 47
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 31.9 bits (69), Expect = 0.51
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCV 236
CA+C + P C H FC LC+
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCI 184
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 11 EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSE 46
>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
Length = 321
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 147 NMEYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAENVQC 272
N+ + C +C + ++P C H FC C + H +N +C
Sbjct: 240 NLPFACIMCRKTFKNPVVTKCLHYFCEAC--ALQHYKKNSKC 279
>SB_11151| Best HMM Match : Neur_chan_memb (HMM E-Value=3.6e-10)
Length = 434
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 219 KHDRRIVLLDVDIFASKQHSHIPYYVR 139
KH +RI+++D+DIFA K H Y++
Sbjct: 20 KHIKRIIVVDLDIFADKSPLHSSQYMK 46
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVTCSLCIEHFNDPRVLPCFHSFCRHCLEELAVHSE 47
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSE 47
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 12 EVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSE 47
>SB_14518| Best HMM Match : MIB_HERC2 (HMM E-Value=2.4e-38)
Length = 742
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 167 CLLAKMSTSNKTILRSCFLFSLCEGCSSSSRKCAMCRTEI 286
C++ S + + + C CEGC S +KC CR I
Sbjct: 625 CMVCSEKKS-QLLFKPCNHMVACEGCGSLMKKCIQCRENI 663
>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLC 233
E+ C+ C + HP CGHV C C
Sbjct: 15 EFLCSYCRKVYLHPLVTGCGHVLCTKC 41
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E C++C++ P L C H FC C++ +A +E
Sbjct: 132 EVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSE 167
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 239
E+ C VC + T L+C H FC C++
Sbjct: 368 EFSCIVCQELFIRATTLTCSHSFCEYCLQ 396
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKGVA 248
C +CL + + P LSC H C C++ +A
Sbjct: 21 CPICLDEFKEPKTLSCMHDLCRKCLEDMA 49
>SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLS-CGHVFCFLCVK 239
EY+C +C + P ++ CGH FC C++
Sbjct: 23 EYECPICQLAFRDPIQIEECGHRFCQSCLQ 52
>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 117 LKHAVLIFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCV 236
L+ A ++ S E +C++C + P L C H FC C+
Sbjct: 83 LQMASILDSLRQEAECSLCHKTPSEPKILKCFHTFCNECL 122
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCV 236
C +C + + P SCGH FC C+
Sbjct: 194 CPLCRRVFKDPVITSCGHTFCQACI 218
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVK 239
CA+C + P SCGH +C C++
Sbjct: 30 CAICHIVVKDPILTSCGHSYCKCCIQ 55
>SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 147 NMEYDCAVCLQKCQHPTKLSCGHVFCFLC 233
N E+ CA+CL + P C H C C
Sbjct: 20 NEEFHCAICLDVLEKPLSSKCQHSCCSDC 48
>SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 406
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 132 LIFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCVK 239
L+ H C C + + C HVFC+ C+K
Sbjct: 344 LVLFHQARLTCPCCNTRKKDAILTKCFHVFCYECLK 379
>SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E+ CA+CL + P C H C C K E
Sbjct: 165 EFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGE 200
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E+ CA+CL + P C H C C K E
Sbjct: 73 EFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGE 108
>SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15)
Length = 846
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E+ CA+CL + P C H C C K E
Sbjct: 313 EFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGE 348
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E+ CA+CL + P C H C C K E
Sbjct: 639 EFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGE 674
>SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06)
Length = 418
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E+ CA+CL + P C H C C K E
Sbjct: 171 EFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGE 206
>SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E+ CA+CL + P C H C C K E
Sbjct: 316 EFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGE 351
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKG--VAHQAENVQCVA 278
C +C + + CGH FC +C++ A EN +C A
Sbjct: 18 CGICAEVLERAVLTPCGHSFCGVCLETWMNAKLEENEKCPA 58
>SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 239
E+ CA+CL + P C H C C K
Sbjct: 169 EFHCAICLDVLEKPLSSKCQHSCCSDCWK 197
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQA 257
C++C + P L C HV+C C++ ++A
Sbjct: 14 CSLCSEVLTEPKILRCFHVYCQKCLQAETNEA 45
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQ 254
C C+ ++P L C H FC C+ H+
Sbjct: 15 CPKCMNAYENPKVLPCLHTFCSQCLSEELHR 45
>SB_7039| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 577
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 183 CQHPTKLSCGHVFCFLCVKGVA 248
C H T CG FC+LC+K ++
Sbjct: 258 CNHMTCAVCGAEFCWLCMKEIS 279
>SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28)
Length = 562
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 156 YDCAVCLQKCQHPTKLSCGHVFCFLC 233
+ C +C Q P + +CGH C C
Sbjct: 32 FRCTICKHVLQEPLQTTCGHRICESC 57
>SB_384| Best HMM Match : IBR (HMM E-Value=1.1e-12)
Length = 259
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCG---HVFCFLCVKGV 245
C V +Q+ + ++ CG H+FC+ C+KG+
Sbjct: 188 CQVLIQRDEGCAQMMCGNCKHIFCWHCLKGL 218
>SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 147 NMEYDCAVCLQKCQHPTKLSCGHV-FCFLCVKGVAHQ 254
N C +CL+ ++ L+CGHV C C + + HQ
Sbjct: 533 NQGTQCVICLENQRNVVLLNCGHVCSCRTCAQQI-HQ 568
>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVK 239
C+ C ++P +L C H FC C+K
Sbjct: 18 CSACKGFYKNPKRLPCLHAFCCHCLK 43
>SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E+ CA+CL P C H C C K E
Sbjct: 115 EFHCAICLDVLGKPLSSKCQHSCCSDCWKSAFELGE 150
>SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKL-SCGHVFCFLCVKGV 245
+Y C +C + P + CGH FC C++ +
Sbjct: 39 DYQCPICQLPFRDPVQTRDCGHRFCESCLEPI 70
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 147 NMEYDCAVCLQKCQHPTKLSCGHVFCFLCVKG-VAHQAENVQC 272
N+ C +C + +P L C H FC C++ V ++ + C
Sbjct: 140 NVNLFCPLCHEMFANPRLLPCLHTFCKRCLENLVPPRSHTLSC 182
>SB_34455| Best HMM Match : Herpes_UL3 (HMM E-Value=1.8)
Length = 328
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 224 FSLCEGCSSSSRKCAMCRTEIPLDYFENPVLLDKSNLQYAANVDGVEGFQ 373
FS + C S+ +PL FE+P LL + + + VE F+
Sbjct: 146 FSRRKTCEILSKNAREFSDRLPLPVFEDPALLSSATKVTSGRTEAVESFR 195
>SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 153 EYDCAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
E+ CA+CL P C H C C K E
Sbjct: 115 EFHCAICLDVLGKPLSSKCQHSCCSDCWKSAFELGE 150
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCV-KGVAHQAENVQC 272
C +C + +P L C H FC C+ K + Q + C
Sbjct: 17 CGICQETYNNPKVLPCLHSFCQNCLDKSIRSQERVLVC 54
>SB_19615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1376
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 279 VRHIAHFLLDELHPSHKENRK-HDRRIVLLDVDIFASKQHSH 157
V +A FL + HKEN ++R + +L + +FA+ H H
Sbjct: 1158 VESVAEFL-ERTREEHKENPDAYERNVCVLMIQLFAALDHLH 1198
>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +3
Query: 135 IFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCVK 239
++ + +C++C + + P L C H FC C++
Sbjct: 11 VYELSKHLNCSLCHRLIRGPKLLPCLHSFCLACLE 45
>SB_14081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 365 GFQWYYEGRNG-WWKYDERSNSELENAFNNGES--ECTLLLAGTLYIVDFQQ 511
GF W +EG G W YD + +LE A + S + + G IVDF++
Sbjct: 87 GFSWTWEGDYGDWISYDVTTACDLEKACDLQHSMLDLSSCAIGLPNIVDFRK 138
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKGV 245
C +C + + P L C H +C CVK +
Sbjct: 659 CPICSRPFKSPKILPCLHTYCSDCVKEI 686
>SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09)
Length = 310
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKG 242
C +C + P C H +C CV G
Sbjct: 18 CCICRDVLEEPLMAPCEHSYCSACVLG 44
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLS-CGHVFCFLCV 236
C C + +P +L+ CGHV+C CV
Sbjct: 1951 CPACFCEVDNPYQLATCGHVYCRGCV 1976
>SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10)
Length = 691
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 162 CAVCLQKCQHPTKLSCGHVFCFLCVKGVAHQAE 260
C +CL P L C H +C C++ + Q +
Sbjct: 16 CLLCLDIFTDPRLLPCLHTYCKKCLEDLVSQCQ 48
>SB_38475| Best HMM Match : ASC (HMM E-Value=3.1e-14)
Length = 421
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 LAKMSTSNKTILRSCFLFSLCEGCSSSSRKCAMCRTEIPLD-YFENPVLLDKSNLQYAAN 349
L +ST + + + +F L SS+K ++ P+D Y + +L KS YA +
Sbjct: 96 LFNLSTQDSNNIINGIIF-LMSAPRDSSQKSKF--SQFPIDNYTQRGPMLGKSLRSYAHS 152
Query: 350 VDGVEGFQW 376
+DG+ +W
Sbjct: 153 IDGILSLKW 161
>SB_11435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +2
Query: 299 FENPVLLDKSNLQYAANVDGVEGFQ---WYYEGRNGWWKYDERSNSELENAFNNGESE 463
F LD S+ A G+ Q W+ R W K R+ S+ E A N+ E E
Sbjct: 529 FSEQKYLDTSSRAKLAQTLGLNETQVKTWFQNRRMKWKKESNRNKSDAEEATNSTEGE 586
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,207,717
Number of Sequences: 59808
Number of extensions: 461678
Number of successful extensions: 1490
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1482
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -