Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0036.Seq
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50580| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.041
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_11986| Best HMM Match : 7tm_1 (HMM E-Value=0) 32 0.39
SB_16868| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_13139| Best HMM Match : Peptidase_S28 (HMM E-Value=0) 31 0.89
SB_25693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012) 31 1.2
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_29927| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 29 2.7
SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_57435| Best HMM Match : Ricin_B_lectin (HMM E-Value=1.4e-22) 29 3.6
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 29 4.8
SB_13165| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_22170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_50447| Best HMM Match : ProQ (HMM E-Value=0.44) 28 6.3
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 28 6.3
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 28 6.3
SB_31944| Best HMM Match : ET (HMM E-Value=0.86) 28 6.3
SB_17271| Best HMM Match : Ank (HMM E-Value=1.7e-10) 28 8.3
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_13250| Best HMM Match : Toxin_22 (HMM E-Value=1.2) 28 8.3
SB_10352| Best HMM Match : 7tm_1 (HMM E-Value=0.001) 28 8.3
SB_10932| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_8163| Best HMM Match : ResIII (HMM E-Value=0.46) 28 8.3
>SB_50580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = -2
Query: 417 KEIKQELLNCKKLQGYFEENPSDLAALRRDKALHTVKVQQHLAHVPEYL 271
KE+ Q+ + + YFE+NP DL LR DK LH KVQ H+ +VP+YL
Sbjct: 38 KELAQQA--ARNAKAYFEDNPRDLQVLRHDKELHPAKVQAHMKNVPDYL 84
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDV--LSFVSIREKPLMDAVEQH 551
G+E+E+++++ LP Q VL SAT + +V L+ +S++ PL V+ H
Sbjct: 735 GFEEEMRQIIRILPSKRQTVLFSATQTKNVEDLAKLSLKRSPLYVGVDDH 784
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDVL 602
G++D+I ++ + LP Q VL SAT+ DVL
Sbjct: 249 GFKDQIYDVFTRLPTSVQVVLLSATMPTDVL 279
>SB_11986| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 421
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -1
Query: 259 PANEDIVEDQETVTEKPQVKKRKQNANFGSAKRHKYQARQNDPLKSFDVKKKK 101
P ++ + TV EK R N S K YQ N+P++ +V KK+
Sbjct: 313 PQHQQRIRQAYTVYEKQVNSPRLPNDEINSPKLRNYQTNGNNPMRDLNVGKKE 365
>SB_16868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -1
Query: 337 KKGQGTAHCEGAATFGTCTRIPASGCPANEDIVEDQETVTEKPQVKKRKQNANFGSAK 164
K GT H E GT RIP + +ED++E + + + ++KRK ++ + K
Sbjct: 20 KSKSGTVHPEEGKHDGTFPRIPNTAFSFDEDVIEWVKNMELREDLRKRKNASDSPNIK 77
>SB_13139| Best HMM Match : Peptidase_S28 (HMM E-Value=0)
Length = 563
Score = 31.1 bits (67), Expect = 0.89
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = -2
Query: 360 NPSDLAALRRDKALHTVKVQQHLAHVPEYLLPAALPMKILWKTRKQSPRNLKLRNESRMR 181
+PS L + R A++ + + + E LP L W+ R+++ +N +L+N +
Sbjct: 44 DPSHLESATRTSAMNCITILAFYLGIIEASLP--LQTTTFWQIRREAEKNNELKNIRHGK 101
Query: 180 TLEVLKDIN 154
L L +IN
Sbjct: 102 LLSPLPNIN 110
>SB_25693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012)
Length = 826
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Frame = -3
Query: 530 TKSFTKV*FALEEVEGFRYRSRDR----GAP--SPG*QSEKLDSKRSNRSSSTVKSYKAT 369
T SFTK+ + E GF+Y + + AP +SEK + KR S+S S +
Sbjct: 692 TSSFTKLLVEISEKAGFKYGDKQKCQKTNAPWFDEECRSEKANLKRMATSASAAISQRIK 751
Query: 368 SRRTHQ 351
S TH+
Sbjct: 752 SPETHE 757
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDVLSFVS 590
G++++I ++ +LP Q VL SATL ++L S
Sbjct: 155 GFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTS 189
>SB_29927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 820
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 318 HTVKVQQHLAHVPEYLLPAALPMKILWKTRKQSPR 214
HT K +Q + P++L+PA + + W+ + PR
Sbjct: 313 HTSKQRQEESLAPQHLIPALIEHSLAWRASYRDPR 347
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -1
Query: 247 DIVEDQETVTEKPQVKKRK--QNANFGSAKRHKYQARQNDP 131
D+ QE+ + K +V+KRK ++ ++ RHK +R +P
Sbjct: 882 DVTSKQESESRKSEVQKRKIDESEDYVEEHRHKITSRDREP 922
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -1
Query: 253 NEDIVEDQETVTEKPQVKKRKQNANFGSAKRHKYQARQNDPLKSFDVKK 107
++D E+ + + E + + FG + + A +ND LKS D KK
Sbjct: 317 SDDTEENDDDIEEGRTDDSKDDSVKFGEDNKERPDANKNDSLKSRDNKK 365
>SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 29.1 bits (62), Expect = 3.6
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = -2
Query: 423 RLKEIKQELLNCKKLQ------GYFEENPSDLAALRRDKALHTVKVQ-QHLAHVPEYLLP 265
RL+ + EL +C KL + P+++ R LH + V L +P L
Sbjct: 16 RLEVLPVELGSCTKLSVLSLRDNLLQRLPTEIGNCRN---LHVLDVSGNRLECLP--LTI 70
Query: 264 AALPMKILWKTRKQSPRNLKLRNESRMRT 178
LP+K LW + QS LKL+ E +T
Sbjct: 71 GTLPLKALWLSENQSQPVLKLQTEEDEKT 99
>SB_57435| Best HMM Match : Ricin_B_lectin (HMM E-Value=1.4e-22)
Length = 472
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 283 TRIPASGCPANEDIVEDQETVTEKPQVKKRKQNANFGSAK 164
TR A P N+D+ E+QET E P K+R++ F K
Sbjct: 44 TRDEAQTGPTNQDLQENQETSREIP--KEREEEEEFDKRK 81
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDV 605
G+ +I+ +L+ LP Q +L SAT SDD+
Sbjct: 19 GFIHDIRRVLTKLPAKRQNLLFSATFSDDI 48
>SB_13165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 12/57 (21%)
Frame = -3
Query: 479 RYRSRDRGAPSPG*QSEKLDSKRSNRSSSTV------------KSYKATSRRTHQIW 345
RYR + R P PG + EK+D+ + TV YKATS +T Q W
Sbjct: 77 RYRKQVRSVPVPGKRGEKVDAYKGTTCDQTVFGSLRVEEKRALSGYKATS-KTGQTW 132
>SB_22170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 316 HCEGAATFGTCTRIPASGCPANEDIVEDQETVTEKPQVKKRKQ 188
H G + CT+ P + I D +T T+ P V KRKQ
Sbjct: 40 HSSGVLSPELCTQNTVFVEPVVKSIARDSQTQTDFPSVFKRKQ 82
>SB_50447| Best HMM Match : ProQ (HMM E-Value=0.44)
Length = 295
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -1
Query: 253 NEDIVEDQETVTEKPQVKKRKQNANFGSAKRHKYQARQNDPLKSFDVKKKK 101
++D ED + + E+P K+ + +A + K + +++ P K KK+K
Sbjct: 235 DDDDDEDDDEIEEEPPAKRTRHSAASTTPSPRKGRQKKSSPTKQAMGKKRK 285
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDVLSFV 593
G+E I +L +LPK + L SAT +D+V + V
Sbjct: 2 GFEASINTILGYLPKQRRTGLFSATQTDEVEALV 35
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 519 YKSIICTRRSGRVQIPLQRPWRAVTRI--AVREARLKEIKQELLNCKKLQGYFEE 361
YK +SG V + L+ P+ A TRI A E R+KE+++E N G++EE
Sbjct: 654 YKKNPMVEKSGTV-VHLRNPFNA-TRINAASIEDRVKELQKENKNVTGKAGFYEE 706
>SB_31944| Best HMM Match : ET (HMM E-Value=0.86)
Length = 152
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 6 FFFFLNKVN--IYFTKITVHYLLISRYQVSPAVCFFFLTSKLFSGSFCRA*YLCL 164
F + +NK+N IY + T HY + S Y S F L S SFC+ +CL
Sbjct: 42 FIWIVNKINSSIYKPRGTSHYQMHSIYGTS------FSWMNLLSYSFCKGQAMCL 90
>SB_17271| Best HMM Match : Ank (HMM E-Value=1.7e-10)
Length = 548
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 634 LASATLSDDVLSFVSIREKPLMDAVEQHLSNGFKGQKV 521
+ASA+L+D S V P M A E NG +GQ V
Sbjct: 484 MASASLNDSPKSNVHTTGSPAMGAKEIRQENGHQGQVV 521
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -3
Query: 497 EEVEGF---RYRSRDRGAPSPG*QSEKLDSKRSNRSSSTVKSYKATSRRT 357
+E+EG R+RS D +PSP + +D +++ S+ K+ + SR T
Sbjct: 2573 KELEGASVERFRSLDIASPSPSDVAAAMDQPQTHSPESSAKAADSNSRVT 2622
>SB_13250| Best HMM Match : Toxin_22 (HMM E-Value=1.2)
Length = 376
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -1
Query: 283 TRIPASGCPANEDIVEDQETVTEKPQVKKRKQNANFGSAKRHKYQARQND 134
+RI AS CP + + ++T EK KR+++ + G +R K QND
Sbjct: 260 SRILASWCPNKLEPFKHRDTGKEKVCTTKRRKSFDIGILERRKC-VPQND 308
>SB_10352| Best HMM Match : 7tm_1 (HMM E-Value=0.001)
Length = 220
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +2
Query: 110 FNIKTF*WIILPSLIFMSFSTSKVRILLSFLNLRFLGDCFLVFHNIFIGRAAGSRYS 280
F + WII +L + F + F N+ F +F +FI R G R S
Sbjct: 25 FFVSALIWIISIALPLIYFKVGYIMYAFVFSNIAIAVSLFFLFSCLFITRRIGRRNS 81
>SB_10932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -2
Query: 570 WMQSSNISLMDSK--DKKFYKSIICTRRSGRVQIPLQRPWRAVTRIAVREARLKEIKQEL 397
W++ S+IS + D + YK T+ +QI L + T ++ ARL E+ L
Sbjct: 148 WVRKSDISQEEKSHSDSEIYKGTKNTKGKINLQINLAQSKAVSTSMSTLSARLSELSSTL 207
Query: 396 -LNCKKLQ 376
L KLQ
Sbjct: 208 ALASAKLQ 215
>SB_8163| Best HMM Match : ResIII (HMM E-Value=0.46)
Length = 371
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 479 RYRSRDRGAPSPG*QSEKLDSKRSNRSSSTVKSYKATSRRTH 354
RYR + R P P + EK+D+ +S T Y SR H
Sbjct: 211 RYRKQGRPVPVPDKRGEKVDAYKSLEGWITNAVYTGISRVRH 252
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,104,921
Number of Sequences: 59808
Number of extensions: 418566
Number of successful extensions: 1576
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1568
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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