Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0032.Seq
(716 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 89 3e-18
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 61 8e-10
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 58 7e-09
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 56 3e-08
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 52 4e-07
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 48 8e-06
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 48 8e-06
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 46 3e-05
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 45 5e-05
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 45 7e-05
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 44 1e-04
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 43 2e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 43 2e-04
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 43 3e-04
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 42 4e-04
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 42 4e-04
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 42 7e-04
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 42 7e-04
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 40 0.003
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 40 0.003
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 38 0.006
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 38 0.008
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 38 0.011
SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69) 37 0.014
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 37 0.019
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 37 0.019
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 36 0.025
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 35 0.057
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 35 0.057
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 35 0.076
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 33 0.18
SB_5878| Best HMM Match : Tyrosinase (HMM E-Value=0.33) 33 0.18
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 33 0.31
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 32 0.40
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 32 0.40
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 31 0.71
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_58997| Best HMM Match : PC_rep (HMM E-Value=4e-16) 31 0.93
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 31 0.93
SB_39416| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_1966| Best HMM Match : GRP (HMM E-Value=0.53) 31 0.93
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_9199| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 29 2.8
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_22690| Best HMM Match : Collagen (HMM E-Value=0.042) 29 3.8
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 29 5.0
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 28 6.6
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 28 6.6
SB_32243| Best HMM Match : GRP (HMM E-Value=1.2) 28 6.6
SB_44083| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_36498| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-14) 28 8.7
SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_24408| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-17) 28 8.7
SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8) 28 8.7
SB_25763| Best HMM Match : MgtE_N (HMM E-Value=1.9) 28 8.7
SB_5071| Best HMM Match : RIO1 (HMM E-Value=0) 28 8.7
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/82 (47%), Positives = 56/82 (68%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 186
LK+++ QWG IVD V+MK + RS+GFGF+TY + V+E + H +D R +EPKR+
Sbjct: 66 LKDYFSQWGTIVDCVIMK--RDGRSRGFGFVTYESSDSVNEVLKKKDHVLDDREIEPKRS 123
Query: 187 VPREEIKRPEASATVKKLFVAG 252
VPR+E PEA + +K+FV G
Sbjct: 124 VPRDESGAPEAMSKTRKIFVGG 145
Score = 54.8 bits (126), Expect = 7e-08
Identities = 23/68 (33%), Positives = 44/68 (64%)
Frame = +3
Query: 270 EEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDV 449
EE L++YFS +G IV ++ K G+ RGFGFV ++ D V+ V +++H + D+ ++
Sbjct: 63 EEGLKDYFSQWGTIVDCVIM--KRDGRSRGFGFVTYESSDSVNEVLKKKDHVLDDREIEP 120
Query: 450 KKAISKTD 473
K+++ + +
Sbjct: 121 KRSVPRDE 128
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Frame = +3
Query: 270 EEDLREYFSTF------GNIVSVSVVTDKETGKK-RGFGFVEFDDYDPVDRVCLQQNHQI 428
EED++EYF++ G ++ V + D++ K+ RGF FV FD+ + V++VC + H+I
Sbjct: 152 EEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEI 211
Query: 429 KDQHLDVKKAISKTDM 476
+ + +VKKA ++ M
Sbjct: 212 RMKQCEVKKAEPQSAM 227
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 31 GEIVDVVVMKD-PKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 207
GE++DV + +D KR +GF F+T+ +V++ + H+I + E K+A P+ ++
Sbjct: 169 GEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAEPQSAMR 228
Query: 208 RPE 216
+ +
Sbjct: 229 KKD 231
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/87 (40%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
Frame = +1
Query: 4 SLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ----AHMVDEAQNNRPHKIDGRIV 171
+L+E++E +GE+ DVVV+ D TK+S+GFG++T++ +++ + N H+IDG+ V
Sbjct: 29 TLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDKVENGAHRIDGKEV 88
Query: 172 EPKRAVPREEIKRPEASATVKKLFVAG 252
E KRA+PR++ T KK+FV G
Sbjct: 89 EVKRAIPRDDNSATSHEKT-KKIFVGG 114
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +3
Query: 228 R*KVVCSWTKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 407
R K+ ++ E LREYF +G + V V+ D T K RGFG+V F DY V
Sbjct: 13 RAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVL 72
Query: 408 LQQ----NHQIKDQHLDVKKAISKTDMS 479
+ H+I + ++VK+AI + D S
Sbjct: 73 KDKVENGAHRIDGKEVEVKRAIPRDDNS 100
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +3
Query: 234 KVVCSWTKQDIEEEDLREYFSTF--GNIVSVSVVTDKETGKK-RGFGFVEFDDYDPVDRV 404
K+ +D +ED++E + + V ++ KE K RGF FVE ++ D D +
Sbjct: 109 KIFVGGLPEDATKEDIQEAIESLLEEKVDKVDLIMKKEDETKHRGFAFVELNNEDQADEL 168
Query: 405 CLQQNHQIKDQHLDVKKA 458
C + +K + ++ KKA
Sbjct: 169 CCVKKIHVKGKMVEAKKA 186
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/65 (27%), Positives = 37/65 (56%)
Frame = +1
Query: 4 SLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 183
+++ E+ + VD+++ K+ +TK +GF F+ + DE + + G++VE K+
Sbjct: 127 AIESLLEEKVDKVDLIMKKEDETKH-RGFAFVELNNEDQADELCCVKKIHVKGKMVEAKK 185
Query: 184 AVPRE 198
A PR+
Sbjct: 186 ATPRD 190
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +1
Query: 616 WGNQNPWDDNGGGNWSNQG--YGDQGNWGSFGSGY 714
+G +D GG + G YG G G +GS Y
Sbjct: 221 YGGYGGYDQYSGGGYGGYGDSYGSYGGGGGYGSSY 255
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 234 KVVCSWTKQDIEEEDLREYFS-TFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCL 410
K+ K + +E +REYF + + + +T+ + ++RGF FV FD D VD++C
Sbjct: 104 KIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICE 163
Query: 411 QQNHQIKDQHLDVKKAISK 467
Q H I+ ++VK+A+ K
Sbjct: 164 TQFHNIEGNKVEVKRALPK 182
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 270 EEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI-KDQHLD 446
+E L+EYFS +G +V V + D TG+ RGF FV+F D + + I K HL
Sbjct: 42 KESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADAIDPKPAAPIGKPPHLR 101
Query: 447 VKK 455
VKK
Sbjct: 102 VKK 104
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 7 LKEFY-EQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 183
++E++ + + + ++ + + + R +GF F+++ VD+ + H I+G VE KR
Sbjct: 119 IREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKR 178
Query: 184 AVPRE 198
A+P+E
Sbjct: 179 ALPKE 183
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/83 (32%), Positives = 42/83 (50%)
Frame = +1
Query: 4 SLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 183
SLKE++ ++GE+V V + D T R +GF F+ + H+ + ++PK
Sbjct: 44 SLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFK-------------HQSEADAIDPKP 90
Query: 184 AVPREEIKRPEASATVKKLFVAG 252
A P I +P VKK+FV G
Sbjct: 91 AAP---IGKP-PHLRVKKIFVGG 109
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 58.0 bits (134), Expect = 7e-09
Identities = 23/53 (43%), Positives = 38/53 (71%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 165
L++ +E++GE+ + VVM+DP TKRS+GFGF+T+ VD N+ ++DG+
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGK 176
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/66 (39%), Positives = 34/66 (51%)
Frame = +3
Query: 273 EDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVK 452
E LR++F FG + V+ D T + RGFGF+ F D VD V L Q LD K
Sbjct: 122 EGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVD-VVLNSG----AQELDGK 176
Query: 453 KAISKT 470
K ++ T
Sbjct: 177 KMVTTT 182
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +3
Query: 261 DIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQH 440
DIEEE LRE F+T GN+ SV ++ D++TG +GFG+V F+ D V N + K +
Sbjct: 66 DIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRK 125
Query: 441 LDV 449
+ V
Sbjct: 126 IRV 128
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE--PK 180
L+E + G + V +++D KT KGFG++ + V A + GR + P
Sbjct: 72 LRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRKIRVFPS 131
Query: 181 RAVPREE 201
+ P+ E
Sbjct: 132 KDKPQTE 138
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 55.6 bits (128), Expect = 4e-08
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +1
Query: 1 SSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN--NRPHKIDGRIVE 174
S +KE++ ++GEI V DP T+RS+GFGF+ + + ++A+N + H+I GR+ E
Sbjct: 129 SEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKD---EDAKNVLSTSHRIQGRLCE 185
Query: 175 PKRAVPREEIKRPEASATVKKLFV 246
+ P+EE+ P KKLFV
Sbjct: 186 VRLPRPKEELNVP------KKLFV 203
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = +3
Query: 270 EEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDV 449
E +++EYF+ FG I V D T + RGFGFV F + V L +H+I+ + +V
Sbjct: 128 ESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNV-LSTSHRIQGRLCEV 186
Query: 450 KKAISKTDMS 479
+ K +++
Sbjct: 187 RLPRPKEELN 196
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 4 SLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 165
+L++F+ Q+GEI + VV+KD TK+SKG+GF+T + + + A N+ I+GR
Sbjct: 25 ALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKNKRPMIEGR 78
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +3
Query: 270 EEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDV 449
++ LR++F+ FG I V+ D+ T K +G+GFV D + C + I+ + +V
Sbjct: 23 DDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKNKRPMIEGRQANV 82
Query: 450 KKA 458
A
Sbjct: 83 NLA 85
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 48.4 bits (110), Expect = 6e-06
Identities = 17/64 (26%), Positives = 37/64 (57%)
Frame = +3
Query: 228 R*KVVCSWTKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 407
R ++ ++ + +ED+++ F T GN+ S ++ D+ TG+ G+ FV +D+ D ++
Sbjct: 26 RTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAV 85
Query: 408 LQQN 419
+ N
Sbjct: 86 REMN 89
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +3
Query: 258 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 380
+D++EE++ F FG I++ V+ D +G+ RG GFV FD
Sbjct: 122 KDMKEEEVEALFKPFGKIITSKVLKD-VSGEGRGTGFVRFD 161
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 48.0 bits (109), Expect = 8e-06
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 261 DIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN-HQIKDQ 437
+ EE L+E FS G ++S +V D+ETGK +G+GF E+ D + N +++ +
Sbjct: 35 EASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYELNGR 94
Query: 438 HLDVKKAISK 467
L V A S+
Sbjct: 95 ALRVDSAASE 104
Score = 36.7 bits (81), Expect = 0.019
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY-SQAHMVDEAQNNRPHKIDGRIVEPKR 183
LKE + + G ++ ++ D +T + KG+GF Y Q + +N ++++GR +
Sbjct: 41 LKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYELNGRALRVDS 100
Query: 184 AVP---REEIKRPEASA 225
A +EEIK E +A
Sbjct: 101 AASEKNKEEIKSMEMTA 117
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = +3
Query: 270 EEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQ---H 440
+EDL FS FG I+S V+ D++TG+ + F+EF+ + +R + ++ + D H
Sbjct: 133 DEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKMDNVLIDDRRIH 192
Query: 441 LDVKKAISK 467
+D +++SK
Sbjct: 193 VDFSQSVSK 201
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 261 DIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPV-DRVCLQQNHQIKDQ 437
D+ E+D++ F FG +V S+ + TGK +G+GF+E+++ D + + Q
Sbjct: 209 DLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDLGGQ 268
Query: 438 HLDVKKAIS 464
L V +AI+
Sbjct: 269 FLRVGRAIT 277
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 132
+K +E +G++V + K+P T + KG+GFI Y ++A
Sbjct: 215 IKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDA 256
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 261 DIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 380
++ EE +R F FG I + + D K +GF FVE+D
Sbjct: 112 ELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYD 151
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +3
Query: 258 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQ 437
+D +E D+ YF +G + V ++TD+ETGK +G G V+ V+++ + H I
Sbjct: 328 EDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKILEEPVHVIGKS 387
Query: 438 HLDVKK 455
+ +++
Sbjct: 388 QVRLRR 393
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +3
Query: 267 EEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLD 446
+EE L++YF FG + SV ++ G R +GFV F D P V L+++H I + +D
Sbjct: 92 DEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFKDDGPSKEV-LKKSHVINGKTVD 149
Query: 447 VKKA 458
V K+
Sbjct: 150 VGKS 153
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE 174
LK+++EQ+GE+ V +M+ S+ +GF+ + E + H I+G+ V+
Sbjct: 96 LKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFKDDGPSKEVL-KKSHVINGKTVD 149
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 261 DIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIK 431
D ++LREYF G + + ++ + E K+ V F + + +V +++NH IK
Sbjct: 246 DTTVDELREYFEKCGELTGIDLLINSE--KRTCAAIVFFRNLKDIKKV-VEENHTIK 299
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 67 KTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATV 231
+ + KGFGF+T+ ++ +PH +DG+ ++PK AVPR ++ + A +
Sbjct: 137 RARMLKGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPRGPGQQAQTGAVM 191
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 270 EEDLREYFSTFGNIVSVSVVTDKETGKK 353
EEDL+EYFST+G +V V +E G++
Sbjct: 215 EEDLKEYFSTYG-MVEVKKAEYRERGQQ 241
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 354 RGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVKKAISK 467
+GFGFV F D ++ V ++ H + + +D K A+ +
Sbjct: 142 KGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPR 179
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +1
Query: 49 VVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPRE 198
++M D T+R +GFGF+T+ + D+A + + H I+ + VE K+A P+E
Sbjct: 1 MLMFDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPKE 50
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +3
Query: 333 DKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVKKAISKTDM 476
DK T + RGFGFV F+ + D+ C Q H I ++ ++VKKA K M
Sbjct: 5 DKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPKEVM 52
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHK-IDGRIVEPKR 183
+KE + G+IV + VM DP+ K SKGFGF+++ +EA N K I GR + R
Sbjct: 125 MKEICAEAGKIVSLKVMTDPEGK-SKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGR 183
Query: 184 AVPREEIKRPEASATVKK 237
A R E + E A ++K
Sbjct: 184 AKKRAE-RAAEVKAEIEK 200
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +3
Query: 261 DIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 380
D+++E ++E + G IVS+ V+TD E GK +GFGFV F+
Sbjct: 119 DMDDEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGFVSFE 157
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +3
Query: 264 IEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 428
I++E LRE FS +G I S V+ D + G +GFGFV F + + + N +I
Sbjct: 223 IDDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAVTEMNGRI 276
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPK 180
L+E + +G I VMKD K SKGFGF+ +S +A +++GRI+ K
Sbjct: 228 LREEFSPYGTISSAKVMKDDKGN-SKGFGFVCFSSPEEATKAVT----EMNGRILISK 280
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/40 (42%), Positives = 28/40 (70%)
Frame = +3
Query: 258 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 377
+D +EDLR F +FG+I V +V D +T + +G+G+V+F
Sbjct: 62 KDFNDEDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKF 101
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPK 180
L+ +E +G+I V +++D KT+ +KG+G++ + ++ A N + EPK
Sbjct: 69 LRSKFESFGDIEYVQIVRDHKTRENKGYGYVKFHKSSTAAMALENCDKSLKAVWAEPK 126
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +3
Query: 264 IEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 401
++E+ L E F ++V V V+TD+ETG+ RGFGFV F + +++
Sbjct: 16 VDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEK 60
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 34 EIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPREE 201
++VDV V+ D +T R +GFGF+T+ +++A + DGR ++ +A PR E
Sbjct: 29 DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDFDGRPMKVNQAQPRGE 85
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 309 IVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 401
++SV V+TD+ETG+ RGFGFV F D +D+
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDK 65
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 34 EIVDVVVMKDPKTKRSKGFGFITY-SQAHMVDEAQNNRPHKIDGRIVEPKRAVPREE 201
++VDV V+ D +T+R +GF F+T+ S+ +M D + DGR ++ +A RE+
Sbjct: 254 DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELDGQEFDGRSMKVNQARSREQ 310
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +3
Query: 264 IEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 377
+ E DL++ FS + ++V V V++D+ET + RGF FV F
Sbjct: 241 VNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTF 277
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 37 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPREE 201
++ V V+ D +T R +GFGF+T+ +D+A + +DGR ++ +A PR E
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPRGE 90
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 234 KVVCSWTKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ 413
++ C ++ +E L F+ + + + +V DK++ K +G+GFV F D + + +
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMRE 277
Query: 414 QN-HQIKDQHL 443
N DQHL
Sbjct: 278 MNVLSFADQHL 288
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = +1
Query: 4 SLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 105
SL + ++ + +++D K+ +SKG+GF+++
Sbjct: 232 SLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSF 265
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +3
Query: 240 VCSWTKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 380
VC+ KQ + E + R+ F +GNIV+ ++ DK TG +G GFV +D
Sbjct: 137 VCNIPKQ-LPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYD 182
Score = 32.3 bits (70), Expect = 0.40
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +3
Query: 237 VVCSWTKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 380
++ ++ QD+ ++ R F ++ + +V K +G GFGFV+++
Sbjct: 49 LIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYN 96
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 261 DIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 419
+I E ++ F FG + SV ++ D ET + +G+GFV+F + + R Q N
Sbjct: 252 NITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMN 304
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +3
Query: 237 VVCSWTKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPV 395
V C ++I DL E+FS G + V +++D+ + + +G ++EF D V
Sbjct: 148 VFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAV 200
Score = 35.1 bits (77), Expect = 0.057
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 132
+K +E +G + V ++ D +T RSKG+GF+ + +A A
Sbjct: 258 VKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRA 299
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMV 123
L+EF+ + G++ DV ++ D ++RSKG +I ++ V
Sbjct: 162 LEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAV 200
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 258 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 380
++++E+ L F FG+I V + D T K RGFGFVEF+
Sbjct: 14 EEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFE 54
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 28 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKRAVP 192
+G+I DV + D T + +GFGF+ + A A N ++ GR + A P
Sbjct: 28 FGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMNESELFGRTIRVNLAKP 83
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 264 IEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 380
++E+ L E F N+V V V+TD+ETG+ RGFGFV +
Sbjct: 93 VDEQALEEKFHDC-NVVDVRVITDRETGRPRGFGFVTLE 130
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 37 IVDVVVMKDPKTKRSKGFGFIT 102
+VDV V+ D +T R +GFGF+T
Sbjct: 107 VVDVRVITDRETGRPRGFGFVT 128
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Frame = +3
Query: 234 KVVCSWTKQDIEEEDLREYFSTFGNI--VSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 407
K+ K + EED++ + + + +V D+ET K +G+ FV F + VD++
Sbjct: 105 KLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKLY 164
Query: 408 LQQNHQIKDQHLDVKKA 458
L ++ Q+K + +++KKA
Sbjct: 165 LVRHIQVKGKDVEMKKA 181
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +1
Query: 34 EIVDVVVMKDPKTKRSKGFGFITYSQ-AHMVDEAQNN-RPHKIDGRIVEPKRAVPREEIK 207
++ V + K P+ K S+ F F+ +S + ++D N H ID + VE KRA+PR++
Sbjct: 38 DVSSVSLAKTPEGK-SRKFCFVEFSNGSDIIDNIVFNFESHSIDNKQVEVKRAMPRDD-P 95
Query: 208 RPEASATVKKLFVAG 252
A KKLF+ G
Sbjct: 96 NELAHVRTKKLFIGG 110
Score = 35.1 bits (77), Expect = 0.057
Identities = 14/49 (28%), Positives = 31/49 (63%)
Frame = +1
Query: 40 VDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 186
+++ +++D +T + KG+ F+ + H+VD+ R ++ G+ VE K+A
Sbjct: 133 LEIKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKDVEMKKA 181
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 267 EEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNH-QIKDQHL 443
+E ++ + F FG + V ++ DKE+G+ RGFGFV D + + N + +++
Sbjct: 21 DEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEKMNQSSVGGRNI 79
Query: 444 DVKKAISKTD 473
V A+ KT+
Sbjct: 80 TVALALDKTE 89
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKR 183
+++ +E++G + V +++D ++ RS+GFGF+ A + A + + GR +
Sbjct: 25 IEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEKMNQSSVGGRNITVAL 83
Query: 184 AVPREE 201
A+ + E
Sbjct: 84 ALDKTE 89
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 258 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 383
Q+ + DL + F FG ++S V DK+T + FGFV +D+
Sbjct: 286 QEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDN 327
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 1 SSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR--IVE 174
SSL+ + +G I D+ +++ +T +SKGFG++TY A A H IDG+ I E
Sbjct: 77 SSLESVFGPYGAIEDLSIIRT-QTGKSKGFGYVTYENAESAQRALAG-THIIDGKWVIAE 134
Query: 175 PK 180
PK
Sbjct: 135 PK 136
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 255 KQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 401
+ DI + L F +G I +S++ +TGK +GFG+V +++ + R
Sbjct: 71 RPDIRKSSLESVFGPYGAIEDLSIIRT-QTGKSKGFGYVTYENAESAQR 118
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 261 DIEEEDLREYFSTFGNIVSV-SVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQ 425
+++E+ L + FS FG I+ ++ D +TG +GF F+ F +D D N Q
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQ 165
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 258 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 377
+ + E + E F G +V+V + D+ T +G+GFVEF
Sbjct: 22 EKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEF 61
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 234 KVVCSWTKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ 413
K+ + +++ ++ ++E FS +G + +V + TD+ RGF +VE+ D + ++
Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKH 1217
Query: 414 QN-HQIKDQHLDVKKAI 461
+ QI Q + V+ +
Sbjct: 1218 MDGGQIDGQEIAVQSVL 1234
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 279 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIK 431
L++ FS FG ++ VS+ K G+ +GF F+EF+ + V N + K
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQMFNRESK 154
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +3
Query: 258 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDY 386
++ +E+D+ E FS +G I ++ V D+ TG +G+ VE++ +
Sbjct: 302 EEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETF 344
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 294 STFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRV 404
+ F + V+ D+E+G+ RGFGFV++DD + +V
Sbjct: 307 AAFEGCSNAKVIFDRESGESRGFGFVDYDDVETAKKV 343
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 52 VMKDPKTKRSKGFGFITYSQAHMVDEAQNNRP-HKIDGRIVEPKRAVPREE 201
V+ D ++ S+GFGF+ Y + + ++DGR V A PR E
Sbjct: 317 VIFDRESGESRGFGFVDYDDVETAKKVLSEMAGAEVDGRQVRLDFASPRTE 367
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/66 (27%), Positives = 38/66 (57%)
Frame = +1
Query: 1 SSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPK 180
S L+ F+E++G + + +++D K SKG+ FIT+ + D ++N+ +++
Sbjct: 22 SELRAFFEEYGVVKESKIVRD-KHGVSKGYAFITFESQEVADGLRDNKGLDFKDKVLSIG 80
Query: 181 RAVPRE 198
+AV R+
Sbjct: 81 QAVRRK 86
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 37.5 bits (83), Expect = 0.011
Identities = 13/29 (44%), Positives = 23/29 (79%)
Frame = +3
Query: 315 SVSVVTDKETGKKRGFGFVEFDDYDPVDR 401
+V+++TD+ETG+ RGFGFV F + +++
Sbjct: 124 AVNIITDRETGRPRGFGFVTFGSKEEMEK 152
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 46 VVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPR 195
V ++ D +T R +GFGF+T+ +++A + +DGR ++ A PR
Sbjct: 125 VNIITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEAKPR 175
>SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69)
Length = 166
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 55 MKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAV 189
+KD K+ RSK +GF+ + ++A N+PH I+G+ P V
Sbjct: 94 VKDLKSGRSKKYGFVFFKDEEACEKAMGNQPHFIEGQKSGPSSPV 138
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +1
Query: 19 YEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEP 177
+E+ G I D +M DP + +KGF F T+S DEAQ N K+D + + P
Sbjct: 172 FEECGHIYDFRLMIDPISGLTKGFAFCTFSNK---DEAQ-NAVKKLDNKEIRP 220
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 36.7 bits (81), Expect = 0.019
Identities = 14/28 (50%), Positives = 24/28 (85%)
Frame = +3
Query: 300 FGNIVSVSVVTDKETGKKRGFGFVEFDD 383
+G IV+V++V DK+TGK++GF F+ ++D
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYED 29
Score = 34.7 bits (76), Expect = 0.076
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 28 WGEIVDVVVMKDPKTKRSKGFGFITY-SQAHMVDEAQNNRPHKIDGRIV 171
+GEIV+V +++D KT + KGF F+ Y Q + N K+ GR +
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTI 50
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 36.7 bits (81), Expect = 0.019
Identities = 14/28 (50%), Positives = 24/28 (85%)
Frame = +3
Query: 300 FGNIVSVSVVTDKETGKKRGFGFVEFDD 383
+G IV+V++V DK+TGK++GF F+ ++D
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYED 29
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 28 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 141
+GEIV+V +++D KT + KGF F+ Y A +N
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDN 39
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 36.7 bits (81), Expect = 0.019
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 255 KQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 380
K + ++DL +G I+S + DK+T +G+GFV+F+
Sbjct: 108 KANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFE 149
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 36.3 bits (80), Expect = 0.025
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 279 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 383
L + F FG ++S V DK+T + FGFV +D+
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDN 312
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 258 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFG 365
Q+ + DL + F FG ++S V DK+T + FG
Sbjct: 238 QEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFG 273
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 36.3 bits (80), Expect = 0.025
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Frame = +3
Query: 273 EDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF-------DDYDPVDRVCL 410
EDL++ F +G++ + + D+ T + RGF FV F D D +D CL
Sbjct: 30 EDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAMDCMDATCL 82
Score = 35.1 bits (77), Expect = 0.057
Identities = 11/44 (25%), Positives = 28/44 (63%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 138
LK+ ++++G++ D+ + +D T S+GF F+ + + ++A +
Sbjct: 32 LKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAMD 75
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 258 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD-YDPVDRVCLQQNHQIKD 434
QD+ E+DL + F +G+I V + + G F FVEF+D D D V + H+
Sbjct: 270 QDVREKDLHDIFYKYGHIADVDLKNRRGAGPP--FAFVEFEDPRDAEDAVKGRDGHEFDG 327
Query: 435 QHLDVK 452
+ V+
Sbjct: 328 YRIRVE 333
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 261 DIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 380
D +E ++ E FS G + V +VT++ GK +G+G+VE++
Sbjct: 181 DAKESEIEELFSKHGVVKQVRLVTNR-AGKPKGYGYVEYE 219
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 35.9 bits (79), Expect = 0.033
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 294 STFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC-LQQNHQIKDQHLDVKKAISKT 470
S G + +V + TDK TG++R FGFVEF V L ++ D+ ++VK +
Sbjct: 478 SNAGPLENVRIPTDKNTGQQRSFGFVEFSSPVSVHYASELLDGIRLYDRAINVKPQSNNQ 537
Query: 471 D 473
D
Sbjct: 538 D 538
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 35.1 bits (77), Expect = 0.057
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 258 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDY-DPVDRV 404
+D+ E D+ ++ +G I +S+ KRG+GFVEFDD+ D D V
Sbjct: 698 RDVRESDVEKFLRGYGKIRDISL--------KRGYGFVEFDDHRDAEDAV 739
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 35.1 bits (77), Expect = 0.057
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 270 EEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDV 449
E + EYFST G V +GK +GF FV + V+ V + +H I + + +
Sbjct: 55 ESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRLRKKEAVESVLGRDDHVIDNSDVSM 114
Query: 450 KK 455
+K
Sbjct: 115 EK 116
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 1 SSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDG 162
S + E + GEI V + ++ KTK KG +T++ E R H I G
Sbjct: 135 SQILEHFSSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFEVVKKRKHHIHG 188
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 234 KVVCSWTKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ 413
KV+ I E + E+FS+ G I SV + + +T +++G V F V +
Sbjct: 122 KVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFEVVKK 181
Query: 414 QNHQI 428
+ H I
Sbjct: 182 RKHHI 186
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +1
Query: 1 SSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPK 180
S++ E++ GE V+ V + +SKGF F+ + V+ H ID V +
Sbjct: 56 STIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRLRKKEAVESVLGRDDHVIDNSDVSME 115
Query: 181 R 183
+
Sbjct: 116 K 116
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 34.7 bits (76), Expect = 0.076
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 258 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 419
+D+ E L E F+ FG + V ++ D E+GK R GFV F D + + N
Sbjct: 533 EDVTENVLLELFNKFGPVKDVVILRD-ESGKSRQSGFVHFWSSDVAEAANVGMN 585
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 258 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 398
+D E DL ++ +G + +S+ K G+GFVEFDDY D
Sbjct: 14 RDCRERDLEKFVRGYGRVREISM--------KLGYGFVEFDDYRDAD 52
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +3
Query: 270 EEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNH 422
E +++++F FG + + + K++ + +G+ FVEF D V ++ H
Sbjct: 111 ENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEF-ACDEVAKIAADTMH 160
Score = 33.5 bits (73), Expect = 0.18
Identities = 11/36 (30%), Positives = 25/36 (69%)
Frame = +1
Query: 1 SSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYS 108
+ +K+F+EQ+G + + + + K+ RSKG+ F+ ++
Sbjct: 112 NEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFA 147
>SB_5878| Best HMM Match : Tyrosinase (HMM E-Value=0.33)
Length = 292
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +1
Query: 610 WHWG--NQNPWDDNGGGNWSNQGYGDQGN 690
W W + NPW+D G WS Q YG GN
Sbjct: 115 WDWTLTSNNPWNDGEFGLWSPQDYGIGGN 143
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE 174
+KE + Q G + V +P S+GF F+ Y+ A ++ Q R H +GR VE
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQ--RAH--NGRQVE 273
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 261 DIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 377
+ E + S +GNI + +V + TG +G+GFVE+
Sbjct: 123 EFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEY 161
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 279 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 377
++E FS GN+ V + G RGF FV++
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDY 254
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQA 114
++ +EQ+G I DV V+KD TK ++G ++ + +A
Sbjct: 39 IRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKA 74
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 1 SSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 135
S L+E + G I + + KD T +SKGF FI + H D A+
Sbjct: 195 SDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF--VHREDAAR 237
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 270 EEDLREYFSTFGNIVSVSVVTDK--ETGKKRGFGFVEF 377
E L+E FS FG + SV K +K GFGFV+F
Sbjct: 260 EAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQF 297
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVV--MKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEP 177
LKE + +GE+ + V K + R GFGF+ ++ +A + KI GR V
Sbjct: 263 LKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKALEEMNAKKILGRPVAV 322
Query: 178 KRAVPR 195
AVP+
Sbjct: 323 DWAVPK 328
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +1
Query: 4 SLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 183
++ ++Q+G+I V+ D T+ SKG F+ Y A V + +G ++ R
Sbjct: 431 NITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAATDEDSEGLFLDGNR 490
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 261 DIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 380
D +EE+++E F +G + V + K++GFGF+ D
Sbjct: 62 DCDEEEMKEMFKKYGEVAEVFI------NKEKGFGFIRLD 95
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 267 EEEDLREYFSTFGNIVSVSVVTDKETGKKR 356
EE+DLR F +G I ++++ DK TG+ +
Sbjct: 182 EEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 234 KVVCSWTKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKK 353
K+ + +EEDLR FS FG I ++V+ + ++ K
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRNADSTSK 254
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 255 KQDIEEED-LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 380
+ +I E+D L+E ++ V +V +K G RGFGFVEFD
Sbjct: 339 RDEISEDDVLQELYAAEVAFRDVRIVRNK-IGYTRGFGFVEFD 380
Score = 31.1 bits (67), Expect = 0.93
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +1
Query: 37 IVDVVVMKDPKTKRSKGFGFI---TYSQAHMVDE--AQNNRPHKIDGRIVEPKRAVPREE 201
I D+ ++KD T S+GF F+ T +A + E A N P IDGR++ A E
Sbjct: 436 IYDIRLIKDKVTGTSRGFCFVELATIEEATQLLELIAAMNPPFMIDGRVITTLYARKSEP 495
Query: 202 IKRPEASAT 228
P +T
Sbjct: 496 SPVPTTKST 504
>SB_58997| Best HMM Match : PC_rep (HMM E-Value=4e-16)
Length = 181
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 349 RKGALVL*SLMIMIQLTEYACNKITKLK 432
R+GALV S +I+IQ TE+ C+K+ K +
Sbjct: 125 RQGALVA-SALILIQQTEHTCSKVAKFR 151
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 616 WGNQNPWDDNGGGNWSNQGYGDQGNWGSFGSGY 714
WG GGG N+GYG G +G G GY
Sbjct: 794 WGGNRDNYSRGGGGGYNRGYGSGGGYG--GGGY 824
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 165
LKE +E++GE++DV + K P + + F+ +++ +A+ + GR
Sbjct: 265 LKEAFERYGEVIDVDIKKQP---GNNPYAFVQFAELSSAIQARRKMDREYVGR 314
>SB_39416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 738
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 349 RKGALVL*SLMIMIQLTEYACNKITKLK 432
R+GALV S +I+IQ TE+ C+K+ K +
Sbjct: 397 RQGALVA-SALILIQQTEHTCSKVAKFR 423
>SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1182
Score = 31.1 bits (67), Expect = 0.93
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 270 EEDLREYFSTFGNIVSVSVVTDKETGKKRG 359
E +L +FS FG + V +V D+ TG +G
Sbjct: 1079 ELELETFFSNFGPVADVRIVCDRRTGLNKG 1108
>SB_1966| Best HMM Match : GRP (HMM E-Value=0.53)
Length = 178
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 589 GARIQSRWHW-GNQNPWDDNGGGNWSNQGYGDQGNWGSFGSG 711
G R + R H G DD GGN GYGD G G G
Sbjct: 48 GGRGRGRGHGHGGDVGGDDGDGGNCDGDGYGDVGGGGDDDDG 89
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 43 DVVVMKDPKTKRSKGFGFITY 105
+V V+KDP +SKGFGF+++
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSF 561
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 276 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQ 425
DL+ FS +G +V +VT+ + + FG V + + C+Q H+
Sbjct: 364 DLKTRFSQYGKVVGAKIVTNSKAPGAQCFGLVTMTTSEEAAK-CIQHLHR 412
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/79 (21%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 1 SSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEP 177
+ LK + Q+G++V ++ + K ++ FG +T + + + Q+ ++ GR +
Sbjct: 363 ADLKTRFSQYGKVVGAKIVTNSKAPGAQCFGLVTMTTSEEAAKCIQHLHRTELHGRAITV 422
Query: 178 KRAVPREEIKRPEASATVK 234
RA + + + + SA+ K
Sbjct: 423 DRA-KGDRVSQTQGSASKK 440
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 255 KQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGF 368
KQ + + EY S G+ S++ DKETG GF
Sbjct: 35 KQTVALKKADEYLSVHGDKADASIIHDKETGITTKIGF 72
>SB_9199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 637 DDNGGGNWSNQGYGDQGN 690
DD+GGG N G+GD GN
Sbjct: 50 DDSGGGGDINNGFGDNGN 67
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 270 EEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 419
E+D++++F T+G ++ K G+GFVEFD D + + N
Sbjct: 16 EDDVKKFFYTYGRFKIREIIL------KDGYGFVEFDYSDDAEDAVYECN 59
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 318 VSVVTDKETGKKRGFGFVEF-DDYDPVD 398
V VV D+ET + R FG+V F D+ D D
Sbjct: 5 VIVVYDRETRRSRNFGYVTFRDEQDAAD 32
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/21 (42%), Positives = 18/21 (85%)
Frame = +1
Query: 43 DVVVMKDPKTKRSKGFGFITY 105
+V+V+ D +T+RS+ FG++T+
Sbjct: 4 EVIVVYDRETRRSRNFGYVTF 24
>SB_22690| Best HMM Match : Collagen (HMM E-Value=0.042)
Length = 593
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 619 GNQNPWDDNGGGNWSNQGYGDQGNWGSFGSG 711
G + DD GGN + GD G+ G+ G+G
Sbjct: 43 GGDDDGDDGDGGNCDDDDSGDDGSDGNAGNG 73
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Frame = +1
Query: 37 IVDVVVMKDPKTK-------RSKGFGFITYSQAHMVDEAQNNRPHK-IDGRIVEPKRAVP 192
+ DV+++K+P+ + RS+GFGF+T++ A + K + GR ++ ++
Sbjct: 77 VTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPEDAQTAVKSLNGKEVQGRTLKIAPSIS 136
Query: 193 R 195
R
Sbjct: 137 R 137
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 270 EEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF-DDYDPVDRV 404
E+D+R +F ++G + +++ K +GFVEF DD D D V
Sbjct: 16 EDDVRRFFRSYGRLRDINL--------KNNYGFVEFEDDRDADDAV 53
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 7 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN--NRPHKIDGRIVEPK 180
+KE +GE+ ++KD T SKG+ F Y + D A N D +++ +
Sbjct: 689 VKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQGLNGMQLGDKKLIVQR 748
Query: 181 RAV-PREEIKRPEA 219
+V ++ + P+A
Sbjct: 749 ASVGAKQNLNNPQA 762
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 22 EQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 111
E+ GEI + + DP T +KGF F T+++
Sbjct: 174 EKCGEIREFRLQMDPATGLNKGFAFCTFTE 203
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 619 GNQNPWDDNGGGNWSNQGYGDQGNWGSFGSGY 714
GN N ++NGG N N G+ G + G+ Y
Sbjct: 424 GNTNGGNNNGGNNGGNNNGGNTGGDNNGGNNY 455
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 61 DPKTKRSKGFGFITYSQAHMVDEAQNNRPHKI-DGRIVEPKRAVPREEIK 207
+P R +GFGF+T++ A ++A+ I DGR VE + + I+
Sbjct: 117 NPLNLRIEGFGFVTFNTAAEANKAREKLNGTIVDGRKVEVSLCMEQSYIR 166
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 601 QSRWHWGNQNPWDDNGGGNWSNQGYGDQGNWGSFGS-GY 714
Q + G+ N + +NG +SN +QGN S+ S GY
Sbjct: 1367 QGSGYQGSNNAYSNNGYQGYSNANINNQGNINSYQSNGY 1405
>SB_32243| Best HMM Match : GRP (HMM E-Value=1.2)
Length = 121
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 637 DDNGGGNWSNQGYGDQGNWGSFGSG 711
DD+GGG+ + G GD G++G+ G
Sbjct: 38 DDDGGGDDDDGGGGDDGDFGNDNGG 62
>SB_44083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 157 DGRIVEPKRAVPREEIKRPEASATV 231
D R VEP ++P E+KR A +V
Sbjct: 99 DNRAVEPPESIPNSEVKRSIADGSV 123
>SB_36498| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-14)
Length = 596
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -3
Query: 246 YKQLFNGGTSFWSFNLFPWNCSLWL--DNSSVNFV 148
Y +FN G SF FN + W LWL NS +N V
Sbjct: 499 YWVIFNLGFSF--FNYYVWMTLLWLQYSNSCINIV 531
>SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1378
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 243 CSWTKQDIEEEDLREYFSTFGNIVSVSVVT-DKETGKKRGF--GFVEFDD 383
C + D EEE+L+E F+ NI+S+ +T D+E K G G E DD
Sbjct: 1319 CDGYEDDFEEEELQE-FNAEDNILSLKGLTSDEEDPKPWGMVTGIDEGDD 1367
>SB_24408| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-17)
Length = 439
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -3
Query: 246 YKQLFNGGTSFWSFNLFPWNCSLWL--DNSSVNFV 148
Y +FN G SF FN + W LWL NS +N V
Sbjct: 302 YWVIFNLGFSF--FNYYVWMTLLWLQYSNSCINIV 334
>SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8)
Length = 291
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +3
Query: 552 LING-EIKMVVLTRGKDTVKVALGESKSL 635
LING E+K+VV RG D+V+V G+S ++
Sbjct: 58 LINGTELKIVVGLRGGDSVEVQDGQSTTM 86
>SB_25763| Best HMM Match : MgtE_N (HMM E-Value=1.9)
Length = 483
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
Frame = +1
Query: 613 HWGNQNPWDDNGGG---NWSNQGYGDQGNWGSFGS 708
+W N W N NWS+ + NW ++ +
Sbjct: 35 NWSTYNDWSHNNWSTYNNWSHNNWSTYNNWSTYNN 69
>SB_5071| Best HMM Match : RIO1 (HMM E-Value=0)
Length = 556
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 378 DDYDPVDRVCLQQNHQIKDQHLDVKKAISKT 470
D DPVD Q+N Q +D++ D +K KT
Sbjct: 406 DGEDPVDEDVRQENKQTRDENQDNEKEPPKT 436
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,595,442
Number of Sequences: 59808
Number of extensions: 360589
Number of successful extensions: 1603
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1577
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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