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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C12f
         (316 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_41974| Best HMM Match : No HMM Matches (HMM E-Value=.)              99   4e-22
SB_43135| Best HMM Match : CMAS (HMM E-Value=0)                        36   0.005
SB_58926| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   2.4  
SB_51986| Best HMM Match : HLH (HMM E-Value=0.15)                      27   3.2  
SB_86| Best HMM Match : PGK (HMM E-Value=0)                            27   4.2  
SB_46217| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.2  
SB_33643| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   7.4  
SB_42754| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.8  
SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.8  
SB_2072| Best HMM Match : No HMM Matches (HMM E-Value=.)               25   9.8  
SB_39767| Best HMM Match : CBAH (HMM E-Value=0.86)                     25   9.8  

>SB_41974| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 110

 Score =   99 bits (238), Expect = 4e-22
 Identities = 47/73 (64%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
 Frame = +2

Query: 35  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 214
           M S +ELACVYSALIL DDDVA+T +KI T++KAA ++VEP+WPGLFAKAL+G N+ DLI
Sbjct: 1   MASTSELACVYSALILHDDDVAITADKIETLVKAAKINVEPFWPGLFAKALQGHNIADLI 60

Query: 215 TNIGS-GVGAAPA 250
            + G+ G G A A
Sbjct: 61  LSAGAPGAGGAVA 73


>SB_43135| Best HMM Match : CMAS (HMM E-Value=0)
          Length = 254

 Score = 36.3 bits (80), Expect = 0.005
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = -1

Query: 214 DQVTDIDAFQGFGEQTWPIWLYIYSRRFQDGGNFLTSYGNIIIHQDESR 68
           DQ+  I+ F+  G++ WP +  + S R + GG+ +      II  DESR
Sbjct: 102 DQIVSIEMFEAVGQENWPTYFQMLSERLKQGGSAVLQ----IICIDESR 146


>SB_58926| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2371

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 229  RADVGDQVTDIDAFQGFGEQTWPIWLYIYSRRFQDGGNFLTSY 101
            + D+G +VT +      G  T   W+ +YS    D G+F T Y
Sbjct: 2098 QVDLG-RVTRVTGIATQGSPTGDKWVKLYSVEQSDDGHFFTEY 2139


>SB_51986| Best HMM Match : HLH (HMM E-Value=0.15)
          Length = 2110

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -2

Query: 219  LVIRSRTLMPSKA-LANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMRAE*TH 58
            L++ S  + P ++ LA  PGQ G+T+T   F+      PV    S+  +    TH
Sbjct: 1763 LIVPSPAIAPVQSQLATTPGQVGNTNT--LFRPASTMVPVQPAVSNETLHPAVTH 1815


>SB_86| Best HMM Match : PGK (HMM E-Value=0)
          Length = 445

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 140 PPLSRWWKFSHQLRQHHH 87
           PP  RWW++ H LRQ  H
Sbjct: 394 PP--RWWRYRHVLRQMGH 409


>SB_46217| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 882

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 182 ALEGINVRDLITNIGSGVGAAPA 250
           A+EG++ RD++T I +  G  PA
Sbjct: 434 AMEGLSTRDILTAIRNATGPRPA 456


>SB_33643| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 362

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +2

Query: 29  LKMVSKAELACVYSALILV 85
           L+M  KAE+A V+SAL+L+
Sbjct: 179 LRMEQKAEMALVFSALLLL 197


>SB_42754| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 213

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -1

Query: 238 THSRADVGDQVTDIDAFQGFGEQTWPIWLYIYSRRFQDGGNFLTSYGNIIIHQDE 74
           T +R  + DQ+TDI   +G   + W    Y+ S    D   FL S  ++ +  D+
Sbjct: 109 TKARDTIRDQITDITTHRGIMREAWG---YLKSNITDD--TFLDSVSDVGVMVDD 158


>SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 526

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 149 HLQPPLSRWWKFSHQLRQHHHPP 81
           H  PP S    F H L +HH PP
Sbjct: 62  HPPPPASS--SFPHSLHRHHPPP 82


>SB_2072| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 390

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 182 LWRTDLANMALHLQPPLSRWWKFSHQ 105
           LW TDL + +   QPP  R W  +HQ
Sbjct: 116 LWHTDLLS-SRQRQPPPERNWYQAHQ 140


>SB_39767| Best HMM Match : CBAH (HMM E-Value=0.86)
          Length = 1182

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -1

Query: 238 THSRADVGDQVTDIDAFQGFGEQTWPIWLYIYSRRFQDGGNFLTSYGNIIIHQDE 74
           T +R  + DQ+TDI   +G   + W    Y+ S    D   FL S  ++ +  D+
Sbjct: 146 TKARDTIRDQITDITTHRGIMREAWG---YLKSNITDD--TFLDSVSDVGVMVDD 195


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,334,671
Number of Sequences: 59808
Number of extensions: 176413
Number of successful extensions: 415
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 400488992
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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