Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301B11f
(426 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 1e-22
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 2e-18
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 49 2e-06
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 46 2e-05
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 44 5e-05
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 41 4e-04
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 41 4e-04
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 40 7e-04
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 40 7e-04
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 7e-04
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 39 0.002
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 39 0.002
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 38 0.003
SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.014
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.025
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 35 0.025
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.075
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 33 0.075
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 33 0.099
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 33 0.099
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.099
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.17
SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 32 0.23
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.40
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 31 0.53
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 30 0.70
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.70
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.92
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 29 1.6
SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19) 29 1.6
SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_53496| Best HMM Match : bZIP_2 (HMM E-Value=1.2) 29 1.6
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 29 2.1
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 29 2.1
SB_14690| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 29 2.1
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 29 2.1
SB_52619| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 28 3.7
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 27 4.9
SB_13309| Best HMM Match : EGF (HMM E-Value=0) 27 4.9
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 27 4.9
SB_2246| Best HMM Match : G-patch (HMM E-Value=5.5e-11) 27 4.9
SB_48765| Best HMM Match : A1pp (HMM E-Value=3.5e-34) 27 4.9
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 27 6.5
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 27 6.5
SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_48372| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_41448| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_37128| Best HMM Match : Fumarate_red_C (HMM E-Value=3.4) 27 8.6
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 102 bits (245), Expect = 1e-22
Identities = 60/155 (38%), Positives = 86/155 (55%), Gaps = 13/155 (8%)
Frame = +1
Query: 1 GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDD 162
G + T LI+NY+P M+Q+ + +F T+G + SCKLI +R GY FV Y PDD
Sbjct: 21 GTSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDD 80
Query: 163 AVKARKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFA 342
A KA + NG +QNKTLKVS A +P + + NLYI LP ++ +++ LF
Sbjct: 81 ANKAVREMNGARLQNKTLKVSFA------RPSSTEIKNANLYISGLPKDMKEEEVEALFK 134
Query: 343 QFGRIINSRI-------AAGIAFVLYEHQYEAXRA 426
FG+II S++ G FV ++ + EA A
Sbjct: 135 PFGKIITSKVLKDVSGEGRGTGFVRFDKRCEAQTA 169
Score = 35.9 bits (79), Expect = 0.014
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLLMQ 204
+ V +P+ T ++ LFS G + + +L ++GYGFV + ++A A NG
Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIELKLDKGYGFVNMSNYEEACHAICCLNGTPQH 333
Query: 205 NK 210
K
Sbjct: 334 GK 335
Score = 31.9 bits (69), Expect = 0.23
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 189
L ++ +P+ M ++ + +LF GK+ + K++ + RG GFV + + +A A N
Sbjct: 115 LYISGLPKDMKEEEVEALFKPFGKIITSKVLKDVSGEGRGTGFVRFDKRCEAQTAIDDLN 174
Query: 190 GLLMQNKTLKVSHALLN-PELKPPTKP 267
+ +K++ N P + P P
Sbjct: 175 NKTLPGTNVKLTVKFANPPNSRQPAMP 201
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 88.6 bits (210), Expect = 2e-18
Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 14/154 (9%)
Frame = +1
Query: 7 EESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAV 168
+ES T LIVNYIP+ MT +F + L +CK++ ++ G+GFV+Y +DA
Sbjct: 43 QESKTTLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQ 102
Query: 169 KARKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQF 348
KA NG + NK LKV+ + +P NLY+CN+P +L + F +
Sbjct: 103 KAIDKLNGFTIGNKVLKVAFS------RPGGDNTKGANLYVCNIPKQLPEAEFRKAFEAY 156
Query: 349 GRIINSR--------IAAGIAFVLYEHQYEAXRA 426
G I+N R + G FVLY+ + EA A
Sbjct: 157 GNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAA 190
Score = 28.3 bits (60), Expect = 2.8
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Frame = +1
Query: 1 GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN------RGYGFVEYTRPDD 162
G L V IP+ + + F G + +C+L+ + +G GFV Y + +
Sbjct: 127 GDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAE 186
Query: 163 AVKARKAFNGLLMQNKT--LKVSHALLN-PELKPP 258
A A + +G T L++ +A N +++PP
Sbjct: 187 AQAAISSLSGTFFPGSTMGLQIRYADDNSAKVRPP 221
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 48.8 bits (111), Expect = 2e-06
Identities = 39/145 (26%), Positives = 75/145 (51%), Gaps = 17/145 (11%)
Frame = +1
Query: 43 PEVMTQDMMFSLFSTMGKLES---CKLIANR---GYGFVEYTRP--DDAVKARKAFNGLL 198
P+V T+ M++ FST G + S C+ + R GY +V + +P D A++A +G+L
Sbjct: 22 PDV-TEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHDAALEAIARVDGML 80
Query: 199 MQNKTLKVSHALLNPEL--KPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
+ +K + V + E K T+P+ N+Y+ N +++ + + + A+ G+I++ ++
Sbjct: 81 LNDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKV 140
Query: 373 -------AAGIAFVLYEHQYEAXRA 426
+ G FV +E EA A
Sbjct: 141 MTDPEGKSKGFGFVSFETPEEAEEA 165
Score = 39.9 bits (89), Expect = 9e-04
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Frame = +1
Query: 19 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKA 183
T + V + M + M + + GK+ S K++ + +G+GFV + P++A +A
Sbjct: 109 TNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNV 168
Query: 184 FNGLLMQNKTLKVSHALLNPELKPPTKPEAD------------WNLYICNLPNELTLQDL 327
NG + + L A E K E + NLYI NL + + + L
Sbjct: 169 LNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDPIDDERL 228
Query: 328 HGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAXRA 426
F+ +G I ++++ + G FV + EA +A
Sbjct: 229 REEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKA 268
Score = 36.7 bits (81), Expect = 0.008
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 189
L + + + + + + FS G + S K++ + +G+GFV ++ P++A KA N
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMN 273
Query: 190 GLLMQNKTLKVSHALLNPELK 252
G ++ +K L V+ A E K
Sbjct: 274 GRILISKPLYVALAQRREERK 294
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 46.8 bits (106), Expect = 8e-06
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Frame = +1
Query: 4 PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI---ANRG-YGFVEYTRPDDAVK 171
PEE L V + TQ+++ S+F+ + K+ CK+I ++G Y FVE+ DA +
Sbjct: 364 PEEENRSLYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETHADAQE 423
Query: 172 ARKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFG 351
A+ + + +K LKV+ A +P +K +++++ +L + L F FG
Sbjct: 424 AKFRMDQRTVMDKKLKVNWATNHPGMK-RGDTNNHFHIFVGDLAENVDNALLRKTFEPFG 482
Query: 352 RI 357
I
Sbjct: 483 EI 484
Score = 44.4 bits (100), Expect = 4e-05
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Frame = +1
Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALL--NP-ELKP-------PTKPE 270
++G+GFV + R +DA KA + + + K +K + A NP + KP +
Sbjct: 553 SKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQTKPLVWDDVFHQSSQ 612
Query: 271 ADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIAA--GIAFV 393
+ +Y+ NLP ++ +L +F+Q+G I+ +++ A G AF+
Sbjct: 613 LNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFI 655
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 19 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFV 141
T + N P+V ++ +FS G + K+ A++GY F+
Sbjct: 616 TVYVGNLPPDVKDYELQ-QMFSQYGSILETKVFADKGYAFI 655
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 45.6 bits (103), Expect = 2e-05
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Frame = +1
Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNPELKP---PTKPEAD--WNL 285
++G+ FVEY P+ A A + NG+L+ + +KV P+ P + EA +
Sbjct: 142 HKGFAFVEYDLPEAAQLALEQMNGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARI 201
Query: 286 YICNLPNELTLQDLHGLFAQFGRIINSRIA--------AGIAFVLYEHQYEAXRA 426
YI ++ +L D+ +F FG++++ ++ G F+ YE+Q A A
Sbjct: 202 YIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDA 256
Score = 34.3 bits (75), Expect = 0.043
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = +1
Query: 28 IVNYIPEVMTQDMMFSLFSTMGKLESCKLIA------NRGYGFVEYTRPDDAVKARKAFN 189
I + P+++ D+ S+F GK+ C L ++GYGF+EY A A + N
Sbjct: 203 IASVHPDLLEDDIK-SVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMN 261
Query: 190 GLLMQNKTLKVSHALLNP 243
+ + L+V A+ P
Sbjct: 262 LFDLGGQFLRVGRAITPP 279
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 44.0 bits (99), Expect = 5e-05
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Frame = +1
Query: 13 SPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKA 174
S T L + + T D + L G + S K I ++ GYGFV++ P + A
Sbjct: 98 SKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESP---ISA 154
Query: 175 RKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 354
+KA L+ NK ++ A + + PT NLYI NLP L +F+++G+
Sbjct: 155 QKAVAALV--NKGIQAQMA--KQQEQDPT------NLYIQNLPQNCDEAMLENMFSKYGK 204
Query: 355 IINSRI 372
+I++RI
Sbjct: 205 VISTRI 210
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +1
Query: 7 EESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA-----NRGYGFVEYTRPDDAVK 171
E+ PT L + +P+ + M+ ++FS GK+ S +++ ++G GF + +
Sbjct: 175 EQDPTNLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDKDTNSKGVGFARMESAEKCEQ 234
Query: 172 ARKAFN 189
K FN
Sbjct: 235 VIKDFN 240
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 41.9 bits (94), Expect = 2e-04
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESC--KLIAN----RGYGFVEYTRPDDAVKARKAF 186
LIV +P T+ M F+ G+++ C KL N RG+GFV + + +DA
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLSTS 176
Query: 187 NGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI 357
+ + Q + +V EL P K L++ LP T + L FAQFG +
Sbjct: 177 HRI--QGRLCEVRLPRPKEELNVPKK------LFVGRLPESTTEKTLMEYFAQFGEV 225
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 41.1 bits (92), Expect = 4e-04
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 4 PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDA 165
P PTKL V ++ + +D + +FS G++++ L +R G+ +VEY P++
Sbjct: 1152 PTPKPTKLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEEC 1211
Query: 166 VKARKAFNGLLMQNKTLKVSHAL 234
KA K +G + + + V L
Sbjct: 1212 EKALKHMDGGQIDGQEIAVQSVL 1234
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Frame = +1
Query: 16 PTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKAR 177
PT+L V + +T+ M+ ++F G ++S +LI ++GYGFV++ + A +A
Sbjct: 241 PTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAM 300
Query: 178 KAFNGLLMQNKTLKV 222
+ NG + + LK+
Sbjct: 301 EQMNGFELAGRPLKI 315
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 40.3 bits (90), Expect = 7e-04
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = +1
Query: 7 EESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAV 168
+ S + V IP +++ + +FS +G + S +L+ +R GYGF EY + A+
Sbjct: 21 DRSLRSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETAL 80
Query: 169 KARKAFNGLLMQNKTLKVSHA 231
A + NG + + L+V A
Sbjct: 81 SAMRNLNGYELNGRALRVDSA 101
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 40.3 bits (90), Expect = 7e-04
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
+ V + E +++ +++ LF G + + + +R GYGFVE+ +DA A K
Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVM 74
Query: 187 NGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINS 366
N + + K ++V+ A + + + NL+I NL E+ + L+ F+ FG I+ +
Sbjct: 75 NMIKVYGKPIRVNKASAHNK-----NLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQT 129
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 40.3 bits (90), Expect = 7e-04
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHAL 234
+RG+GFV + P+DA A K+ NG +Q +TLK++ ++
Sbjct: 98 SRGFGFVTFANPEDAQTAVKSLNGKEVQGRTLKIAPSI 135
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLLMQ 204
+ V +P M++ + ++F+ G++E + I R YGFV + + + AV+A NG +
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKI--RDYGFVYFAKRESAVQAIDGINGAYID 61
Query: 205 NKTLKVSHAL 234
L+VS A+
Sbjct: 62 GCKLEVSLAI 71
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +1
Query: 22 KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA-----NRGYGFVEYTRPDDAVKARKAF 186
++ V IP + +D + +F T G + +L+ NRGY FV YT DDA + K
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFNGQNRGYAFVVYTSKDDAKRCVKTL 134
Query: 187 N 189
N
Sbjct: 135 N 135
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +1
Query: 10 ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN------RGYGFVEYTRPDDAVK 171
+SP K+ + +P + +D + L S+ G+L + L+ + +GY F EY
Sbjct: 670 DSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDV 729
Query: 172 ARKAFNGLLMQNKTLKVSHA 231
A + NG+ + +K L V A
Sbjct: 730 AIQGLNGMQLGDKKLIVQRA 749
Score = 28.3 bits (60), Expect = 2.8
Identities = 28/137 (20%), Positives = 61/137 (44%), Gaps = 25/137 (18%)
Frame = +1
Query: 22 KLIVNYIPEVMTQDMMFSLFSTMGK-----------LESCKLIANRGYGFVEYTRPDDAV 168
+L V IP +T+++M F+ K + + ++ + + F+E ++
Sbjct: 564 RLYVGNIPFGVTENLMIEFFNAKMKEAKLNTAPGNPVIAAQINTEQNFAFIELRSVEETT 623
Query: 169 KARKAFNGLLMQNKTLKV-------------SHALLN-PELKPPTKPEADWNLYICNLPN 306
+A AF+G+++Q + LK+ +A ++ P + P++ ++I LPN
Sbjct: 624 QAM-AFDGIILQGQALKIRRPKDYQPIPGMSENASVHVPGVVSTVVPDSPHKIFIGGLPN 682
Query: 307 ELTLQDLHGLFAQFGRI 357
L + L + FG +
Sbjct: 683 YLNEDQVKELLSSFGEL 699
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/67 (23%), Positives = 36/67 (53%)
Frame = +1
Query: 31 VNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLLMQNK 210
V ++ +++TQD + +F G + S LI RG +++ + +DA +A + +
Sbjct: 545 VGHLAKIVTQDTLQGIFEEHGTITSIDLIPPRGCAYIQMEKREDAYRALDKLRNIKLYGN 604
Query: 211 TLKVSHA 231
++K++ A
Sbjct: 605 SVKLAWA 611
>SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +1
Query: 52 MTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHA 231
+T++++ F+ +G +E NR GFV + + A KA NGL +Q+ ++VS A
Sbjct: 119 LTEEILKEEFNHLGHVERVNFEKNRSQGFVTFDTWEAADKAIDEMNGLKVQHVHIRVSMA 178
Query: 232 LLNPEL 249
P +
Sbjct: 179 RRQPNM 184
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 35.9 bits (79), Expect = 0.014
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 8/56 (14%)
Frame = +1
Query: 283 LYICNLPNELTLQDLHGLFAQFGRII--------NSRIAAGIAFVLYEHQYEAXRA 426
+Y+ NLP LT DLH +F ++G+++ +R + G+AF+L+ + A A
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNA 67
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 35.1 bits (77), Expect = 0.025
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR-----GYGFVEYTRPDDAVKARKAFN 189
L V+ +P + + LFS G ++ +L+ NR GYG+VEY + A A +
Sbjct: 173 LFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTAVLTLD 232
Query: 190 GLLMQNKTLKVSHALLNPELK--PP 258
++ +T+ V AL NP + PP
Sbjct: 233 KTEVKGRTISV--ALSNPPTRRGPP 255
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 35.1 bits (77), Expect = 0.025
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +1
Query: 22 KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLLM 201
++ + +P +D + F T G+ + ++I GYGFVE+ DDA A NG M
Sbjct: 4 RVYLGRLPYGTREDDVKKFFYTYGRFKIREIILKDGYGFVEFDYSDDAEDAVYECNGKKM 63
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 33.5 bits (73), Expect = 0.075
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +1
Query: 25 LIVNYIP-EVMTQDMMFSLFSTMGKLESCKLIAN------RGYGFVEYTRPDDAVKARKA 183
L V+ +P + ++ LFS G + ++ N RG+ FV+Y ++A K ++A
Sbjct: 207 LFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQRA 266
Query: 184 FNGLLMQNKTLKVSH 228
NG ++ ++V++
Sbjct: 267 HNGRQVEGSNIRVAY 281
Score = 32.7 bits (71), Expect = 0.13
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +1
Query: 4 PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN------RGYGFVEYTRPDDA 165
P + L V +P T+ L S G +E L+ + +GYGFVEY ++A
Sbjct: 108 PAPPESLLFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENA 167
Query: 166 VKARK 180
++A++
Sbjct: 168 MQAKQ 172
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 33.5 bits (73), Expect = 0.075
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Frame = +1
Query: 274 DWNLYICNLPNELTLQDLHGLFAQFGRI----INSRIAAG--IAFVLYEHQYEAXRA 426
D +Y+ NLP ++ +DLH +F ++G I + +R AG AFV +E +A A
Sbjct: 260 DCRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDA 316
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 33.1 bits (72), Expect = 0.099
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 10/122 (8%)
Frame = +1
Query: 22 KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLLM 201
++ + +P T+D + F + G+L L N YGFVE+ DA A NG M
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNN--YGFVEFEDDRDADDAVYECNGKEM 61
Query: 202 QNKTLKVSHAL--LNPELKPPTK--------PEADWNLYICNLPNELTLQDLHGLFAQFG 351
+ + V H+ P++ W + I NL + ++ QDL Q G
Sbjct: 62 LGERILVEHSRGGARSSSSRPSRGRDKYGPPVRTPWRMTIENLSSRVSWQDLKDFCRQVG 121
Query: 352 RI 357
+
Sbjct: 122 DV 123
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 33.1 bits (72), Expect = 0.099
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNPELKPPTKPEAD 276
++GYGFV + P+D +KA + N L ++ H LL P + P + PE D
Sbjct: 257 SKGYGFVSFKDPNDFIKAMREMNVLSFADQ-----H-LLTPFIYPKSWPEND 302
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 33.1 bits (72), Expect = 0.099
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
L V I E +D + LFS G++++ + +R GY VEY +A A +A
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 187 NGLLMQNKTLKVSHALL 237
NG M + + V A +
Sbjct: 355 NGAEMLGQNISVDWAFI 371
Score = 31.5 bits (68), Expect = 0.30
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 265 PEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
P W L++ N+ E D+H LF+ +G I N +
Sbjct: 289 PVEGWILFVTNIHEEAQEDDIHELFSDYGEIKNLHV 324
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 32.3 bits (70), Expect = 0.17
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +1
Query: 19 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLL 198
T+L V + + + ++F GKL C L YGF+EY P DA +A + N
Sbjct: 6 TQLFVGRLSKETKLRDLENVFYLYGKLLRCDL--KTAYGFIEYEDPRDAEEAMRRENNRK 63
Query: 199 MQNKTLKVSHALLNPELKP 255
+ + V + KP
Sbjct: 64 LFGSRIVVEYVRSGERGKP 82
>SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1572
Score = 31.9 bits (69), Expect = 0.23
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 76 LFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNG 192
+FS G LE ++ R Y FV Y ++A+ A + NG
Sbjct: 69 VFSLYGTLERVVMLPQRSYSFVSYKSHNNALNAMRNLNG 107
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 31.1 bits (67), Expect = 0.40
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +1
Query: 121 NRGYGFVEYTRPDDAVKARKAF-NGLLMQNKTLKVSHALLNPELKPPTKPEADWNL-YIC 294
NRG+ F+EY A AR+ +G + + V+ +P+ +P + Y+
Sbjct: 275 NRGFAFLEYESHQAASLARRRLASGRIKVWGNIVVTVDWADPQEEPDDDAMKKVKVVYLR 334
Query: 295 NLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAXRA 426
NL +T + L ++Q+G + + AFV + + A +A
Sbjct: 335 NLSPSITEEKLKEEYSQYGAVDRVKKLKDYAFVHFTERDHALKA 378
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 30.7 bits (66), Expect = 0.53
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
NL+I +LP E T DL F FG +I++++
Sbjct: 230 NLFIYHLPQEFTDADLMQTFQPFGTVISAKV 260
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 30.7 bits (66), Expect = 0.53
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
NL+I +LP E T DL F FG +I++++
Sbjct: 278 NLFIYHLPQEFTDADLMQTFQPFGTVISAKV 308
Score = 29.9 bits (64), Expect = 0.92
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Frame = +1
Query: 1 GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 162
GP+ S L + ++P+ T + F G + S K+ ++ +GFV Y
Sbjct: 273 GPDGS--NLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMS 330
Query: 163 AVKARKAFNGLLMQNKTLKV 222
A A + NG + K LKV
Sbjct: 331 AQNAIQHMNGFQIGAKRLKV 350
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 30.3 bits (65), Expect = 0.70
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 127 GYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVS 225
G+GFV + +A KAR+ NG ++ + ++VS
Sbjct: 125 GFGFVTFNTAAEANKAREKLNGTIVDGRKVEVS 157
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 30.3 bits (65), Expect = 0.70
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 124 RGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHA 231
RGY FVE+ + +DA KA + N ++ ++ L V A
Sbjct: 431 RGYCFVEFKKKEDARKALRGLNKKIVLSRALVVDWA 466
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 29.9 bits (64), Expect = 0.92
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 205 NKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFG--RIINSRIAA 378
NK LK + ++ P L PT LY+ L ++T QDL F QFG R I+
Sbjct: 283 NKLLKQAQSM--PMLDTPTDRSIT-TLYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQ 339
Query: 379 GIAFVLYEHQYEAXRA 426
AFV + + A A
Sbjct: 340 NCAFVCFTSRAAAEAA 355
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
L V + V T + + +FS G + SC++I ++ Y F+E+ + +D +A
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181
Query: 187 NGLLMQNKTLKV 222
+ +L+ ++ + V
Sbjct: 182 DNVLIDDRRIHV 193
Score = 28.3 bits (60), Expect = 2.8
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 187 NGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINS 366
NGL+ ++ + A ++KPP D L++C L T +DL +F++FG I++
Sbjct: 99 NGLIRDDRIGDIPDA----DIKPP-----DNVLFVCKLNPVTTDEDLEIIFSRFGTILSC 149
Query: 367 RI 372
+
Sbjct: 150 EV 151
>SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19)
Length = 623
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 127 GYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNPE 246
G GFV + P+ AVKA +G + Q + L + A E
Sbjct: 283 GIGFVTFLMPEHAVKAFNELDGTVFQGRLLHILPAKAKKE 322
>SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 29.1 bits (62), Expect = 1.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 353 LPNCANNPCKSCKVNSLGRLQM*RFQ 276
LP CA+N C+ C + + + Q+ RF+
Sbjct: 38 LPKCAHNICRECLLGIIEKAQLERFE 63
>SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 124 RGYGFVEYTRPDDAVKARKAFNGL-LMQNKTLKVSH 228
RGY F+E++ DAV+A K NG L ++ V+H
Sbjct: 117 RGYIFLEFSNASDAVRAVKTANGYKLDKHHIFAVNH 152
>SB_53496| Best HMM Match : bZIP_2 (HMM E-Value=1.2)
Length = 196
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 178 KAFNGLLMQNKTLKVSHALLNPELKPPTKPEADW 279
+ FN + Q+ T + LL+ PP K E+DW
Sbjct: 78 RPFNNEIFQDPTQMMHQCLLSTRQLPPMKHESDW 111
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +1
Query: 283 LYICNLPNELTLQDLHGLFAQFGRIIN---SRIAAGIAFVLYEHQYEAXRA 426
LY+ NL +L F +FGR+ +R G AFV YE +A A
Sbjct: 6 LYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEA 56
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 46 EVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKV 222
++ QD+ +FS GK+ C L AN +GFV++ A +A +G ++ K + V
Sbjct: 57 KIARQDLE-EIFSRHGKVLGCSLHAN--FGFVQFETEKGADEAVAKEHGRIINGKKIDV 112
>SB_14690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2
Query: 362 LIILPNCANNPCKS 321
L +LPNCA+NPC S
Sbjct: 100 LSLLPNCADNPCNS 113
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHA 231
+RG+GFV +D + F+G + + LKV+ A
Sbjct: 82 SRGFGFVTLENQEDLEDVTRKFDGFEYEGRRLKVAEA 118
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Frame = +1
Query: 19 TKLIVNYIPEVMTQDMMFSLFSTMGKLESC----KLIANR----GYGFVEYTRPDDAVKA 174
++LI+ + T+ ++ FS G++ K + R G+GFV++T DA KA
Sbjct: 247 SRLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKA 306
Query: 175 RKAFNGLLMQNKTLKVSHAL 234
+ N + + + V A+
Sbjct: 307 LEEMNAKKILGRPVAVDWAV 326
Score = 28.3 bits (60), Expect = 2.8
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = +1
Query: 4 PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-------RGYGFVEYTRPDD 162
P S T + V +P +T S F +G L+ ++ + RG+G+V + +D
Sbjct: 15 PVISKTTIFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFALEED 74
Query: 163 AVKAR 177
A+KA+
Sbjct: 75 ALKAK 79
>SB_52619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 28.3 bits (60), Expect = 2.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 119 QIEAMDSSSTHVRTMQLKLVKRSTVY*CRIRLSK-----CHTHYLIQNLSHQQNLKPTGI 283
++E+MD+S T + L KR +V I LSK CH + L+ LS + P +
Sbjct: 104 KVESMDTSETLTEDWRASLDKRESVGVVAIDLSKAFYSICH-NLLLAKLS-AYGVSPAAL 161
Query: 284 STFVTYL 304
T +YL
Sbjct: 162 KTIQSYL 168
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 124 RGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHA 231
RG+GFV + D+ KA F+G + + +KV+ A
Sbjct: 50 RGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKA 85
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 124 RGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHA 231
RG+GFV + ++ KA F+G + + +KV+ A
Sbjct: 137 RGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEA 172
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 247 LKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIIN 363
+ P P+A L++ NL ++ QDL F +FG +++
Sbjct: 227 IPPEEDPKATRTLFVGNLETGISCQDLRLSFEKFGVVLD 265
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 27.9 bits (59), Expect = 3.7
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKA-RKAF 186
L V + ++T +++ FS G +E ++ + +G+G VE++R ++A A +K
Sbjct: 128 LRVKNLDNLVTNELLEQAFSQFGDVERAVVVCDVRGRSKGHGIVEFSRKNNAHNAMQKIS 187
Query: 187 NGLLMQNKT 213
L + +T
Sbjct: 188 ESLFLLGRT 196
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 27.5 bits (58), Expect = 4.9
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 3/114 (2%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKL---ESCKLIANRGYGFVEYTRPDDAVKARKAFNGL 195
L V I + T + F G++ + K N Y FV++ A++AR+ +
Sbjct: 251 LFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPGNNPYAFVQFAELSSAIQARRKMDRE 310
Query: 196 LMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI 357
+ +KV +NP +++ + N L+ Q + F ++GR+
Sbjct: 311 YVGRNRVKVGFGKVNPIN----------TIWVGGVTNSLSEQQVERHFGRYGRV 354
>SB_13309| Best HMM Match : EGF (HMM E-Value=0)
Length = 718
Score = 27.5 bits (58), Expect = 4.9
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 22 KLIVNYIPEVMTQDMMFSLF---STMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNG 192
K+IVN PE++ DM S+ + K E K + +G Y+ PD VK+ K
Sbjct: 635 KMIVNLRPEIIWTDMKTSVVDKCAKAAKAEGFKYFGIQFHGEC-YSGPDAEVKSIKTAK- 692
Query: 193 LLMQNKTLKVSHAL 234
LL+ N L++ +
Sbjct: 693 LLITNAGLELEERM 706
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 27.5 bits (58), Expect = 4.9
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Frame = +1
Query: 259 TKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIAA--------GIAFVLYEHQYE 414
TK + L++ L E T + L F+++G ++ I G AFV ++HQ E
Sbjct: 23 TKDDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSE 82
Query: 415 A 417
A
Sbjct: 83 A 83
>SB_2246| Best HMM Match : G-patch (HMM E-Value=5.5e-11)
Length = 396
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 136 FVEYTRPDDAVKARKAFNGLLMQNKTLKVS 225
FVE+TR + A+KA NG +T+K +
Sbjct: 351 FVEFTRMESAIKAVVDLNGRYFGGRTVKAN 380
>SB_48765| Best HMM Match : A1pp (HMM E-Value=3.5e-34)
Length = 354
Score = 27.5 bits (58), Expect = 4.9
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 127 GYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNPELKPPTKPEAD 276
GYG + D AR+ GL Q K S+A + +PPTKP AD
Sbjct: 200 GYGRGRGQKRDWNETARRPGQGL--QVKPAAESNAQTDRNARPPTKPTAD 247
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 27.5 bits (58), Expect = 4.9
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Frame = +1
Query: 1 GPEES--PTKLIVNY--IPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTR 153
GP + PT +I+ + E+ D++ L++ +++ N RG+GFVE+
Sbjct: 322 GPRDPGPPTSVIMLHGLRDEISEDDVLQELYAAEVAFRDVRIVRNKIGYTRGFGFVEFDT 381
Query: 154 PDDAVKARKAFNGLLMQNKTLKVSHALLNPEL-KPPTKPEADWN 282
P+ A K + L + LKV + E +P E DWN
Sbjct: 382 PE----AAKEWMDYL-KGGPLKVLGYNIGVEYSRPKEGQEKDWN 420
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 124 RGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHA 231
RG+GFV + ++ KA F+G + +KV+ A
Sbjct: 45 RGFGFVTFGSKEEMEKAIDEFDGQDFDGRPMKVNQA 80
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 27.1 bits (57), Expect = 6.5
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +1
Query: 7 EESPTKLIVNYIPEVMTQDMM---FSLFSTMGKLE---SCKLIANRGYGFVEYTRPDDAV 168
E SP + + +IP ++ + F F T+ ++ S K ++GY FVE+ + A
Sbjct: 94 ELSPGVIYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAK 153
Query: 169 KARKAFNGLLMQNKTLK 219
A + +M + LK
Sbjct: 154 IAADTMHNYMMFGRLLK 170
>SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 76 LFSTMGKLESCKLIANRGYGFVE-YTRPDDAVK 171
+F+T G+L +C L+ + YGFVE P+D V+
Sbjct: 746 VFNTYGQLANCHLL--QSYGFVEGPDNPNDTVE 776
>SB_48372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 247 LKPPTKPEADWNLYI-CNLPNELTLQDLHGLFAQFGRI 357
LKPP KPE W+ Y+ ++ L + ++ F F ++
Sbjct: 9 LKPPPKPELTWSEYLRYDIDEVLKVLEVIAPFKHFSKL 46
>SB_41448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 46 EVMTQDMMFSLFSTMGKLESCK-LIANRGYGFVEY 147
E MT+D + S T+GK+ + + L+A +G++ Y
Sbjct: 116 EEMTEDKVRSSLDTLGKVHTIRCLVAMSAFGYLVY 150
>SB_37128| Best HMM Match : Fumarate_red_C (HMM E-Value=3.4)
Length = 154
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 46 EVMTQDMMFSLFSTMGKLESCK-LIANRGYGFVEY 147
E MT+D + S T+GK+ + + L+A +G++ Y
Sbjct: 116 EEMTEDKVRSSLDTLGKVHTIRCLVAMSAFGYLVY 150
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,539,884
Number of Sequences: 59808
Number of extensions: 230718
Number of successful extensions: 669
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 814166562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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