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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0015
         (461 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)                   32   0.20 
SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.4  
SB_38556| Best HMM Match : RVP (HMM E-Value=1.4)                       29   1.4  
SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037)                 29   1.4  
SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   1.4  
SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   1.4  
SB_43706| Best HMM Match : RVP (HMM E-Value=1.4)                       29   1.4  
SB_22574| Best HMM Match : RVP (HMM E-Value=1.4)                       29   1.4  
SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014)                 29   1.4  
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.5  
SB_38461| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=6.5)           28   4.3  
SB_12852| Best HMM Match : Mic1 (HMM E-Value=0.32)                     27   5.7  
SB_56925| Best HMM Match : RVP (HMM E-Value=2.3)                       27   7.6  
SB_44556| Best HMM Match : RVP (HMM E-Value=2.3)                       27   7.6  
SB_7574| Best HMM Match : RVP (HMM E-Value=2.3)                        27   7.6  
SB_27063| Best HMM Match : GATA (HMM E-Value=2e-18)                    27   7.6  
SB_7200| Best HMM Match : Tubulin-binding (HMM E-Value=5.1)            27   7.6  
SB_51535| Best HMM Match : W2 (HMM E-Value=4e-29)                      27   10.0 
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   10.0 
SB_33949| Best HMM Match : TFIIB (HMM E-Value=0.0018)                  27   10.0 
SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   10.0 
SB_16815| Best HMM Match : TIL (HMM E-Value=0.39)                      27   10.0 
SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   10.0 

>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
          Length = 1544

 Score = 32.3 bits (70), Expect = 0.20
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -3

Query: 219 DVTDNDVVCEGDGSGSLS-NDVLKGKSSGSERPQDAAENADFSFSGTD*C*NSGNSQD*V 43
           DV+D D V +GD  G+ + +DV  G S G +    +++  D S +G +   N  N  D V
Sbjct: 166 DVSDGDDVSDGDVDGANNCDDVSNGASDGDDVSNGSSDGDDVS-NGANDVSNGANDGDDV 224

Query: 42  ESGADVAD 19
            + A+  D
Sbjct: 225 SNVANDGD 232


>SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1505

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
 Frame = +1

Query: 34  TRL--NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSL 192
           TRL  N+  +   VS + GS++    GE R+ F+R  +SF+  GL +EN+  E  A    
Sbjct: 331 TRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPF 390

Query: 193 AD--NIIVSDIGAAITIGD 243
            +  +I V      I +GD
Sbjct: 391 MEKNDIAVRPAKGQIILGD 409


>SB_38556| Best HMM Match : RVP (HMM E-Value=1.4)
          Length = 230

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
 Frame = +1

Query: 34  TRL--NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSL 192
           TRL  N+  +   VS + GS++    GE R+ F+R  +SF+  GL +EN+  E  A    
Sbjct: 87  TRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPF 146

Query: 193 AD--NIIVSDIGAAITIGD 243
            +  +I V      I +GD
Sbjct: 147 MEKNDIAVRPAKGQIILGD 165


>SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037)
          Length = 1283

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
 Frame = +1

Query: 34  TRL--NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSL 192
           TRL  N+  +   VS + GS++    GE R+ F+R  +SF+  GL +EN+  E  A    
Sbjct: 343 TRLGCNITTSSQSVSQADGSSQLHVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPF 402

Query: 193 AD--NIIVSDIGAAITIGD 243
            +  +I V      I +GD
Sbjct: 403 MEKNDIAVRPAKGQIILGD 421


>SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 461

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
 Frame = +1

Query: 34  TRL--NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSL 192
           TRL  N+  +   VS + GS++    GE R+ F+R  +SF+  GL +EN+  E  A    
Sbjct: 8   TRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPF 67

Query: 193 --ADNIIVSDIGAAITIGD 243
              ++I V      I +GD
Sbjct: 68  METNDIAVRPAKGQIILGD 86


>SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1586

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
 Frame = +1

Query: 34  TRL--NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSL 192
           TRL  N+  +   VS + GS++    GE R+ F+R  +SF+  GL +EN+  E  A    
Sbjct: 389 TRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPF 448

Query: 193 AD--NIIVSDIGAAITIGD 243
            +  +I V      I +GD
Sbjct: 449 MEKNDIAVRPAKGQIILGD 467


>SB_43706| Best HMM Match : RVP (HMM E-Value=1.4)
          Length = 577

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
 Frame = +1

Query: 34  TRL--NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSL 192
           TRL  N+  +   VS + GS++    GE R+ F+R  +SF+  GL +EN+  E  A    
Sbjct: 342 TRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPF 401

Query: 193 AD--NIIVSDIGAAITIGD 243
            +  +I V      I +GD
Sbjct: 402 MEKNDIAVRPAKGQIILGD 420


>SB_22574| Best HMM Match : RVP (HMM E-Value=1.4)
          Length = 382

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
 Frame = +1

Query: 34  TRL--NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSL 192
           TRL  N+  +   VS + GS++    GE R+ F+R  +SF+  GL +EN+  E  A    
Sbjct: 239 TRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPF 298

Query: 193 AD--NIIVSDIGAAITIGD 243
            +  +I V      I +GD
Sbjct: 299 MEKNDIAVRPAKGQIILGD 317


>SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
          Length = 1212

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
 Frame = +1

Query: 34  TRL--NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSL 192
           TRL  N+  +   VS + GS++    GE R+ F+R  +SF+  GL +EN+  E  A    
Sbjct: 352 TRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPF 411

Query: 193 AD--NIIVSDIGAAITIGD 243
            +  +I V      I +GD
Sbjct: 412 MEKNDIAVRPAKGQIILGD 430


>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1584

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -3

Query: 243 IANSYCSSDVTDNDV-VCEGDGSGSLSNDVLKGKSSGSERPQDAA 112
           + +S+   + TD D  + +G+GSGS  N +  G  +GS   +++A
Sbjct: 695 LVDSHTPKEFTDTDAKLLQGEGSGSQHNVMRGGSGAGSGNLKESA 739


>SB_38461| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=6.5)
          Length = 207

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +1

Query: 43  NLVLAVPRVSASVG-SAEGEIRIFSRVLRSFASGGLALENVVAEATASVSLADNIIVSDI 219
           N+  +  R +AS G   + EIR+    + +   GGLAL  +   AT    L   ++VS +
Sbjct: 12  NISASRNRHTASFGHGGDKEIRVQYAEIVAAVLGGLALAWIADLATGRRGLGATVLVSGV 71

Query: 220 GAA 228
           G A
Sbjct: 72  GLA 74


>SB_12852| Best HMM Match : Mic1 (HMM E-Value=0.32)
          Length = 1077

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 157 NVVAEATASVSLADNIIVSDIGAAITIGDVKSNSKSISSDA 279
           NV+A+     S      V D+G+A+  G  K++ K++S+ A
Sbjct: 830 NVIAQGVKQTSKVIESGVDDVGSAVANGASKASRKTVSNVA 870


>SB_56925| Best HMM Match : RVP (HMM E-Value=2.3)
          Length = 226

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
 Frame = +1

Query: 34  TRL--NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATA 180
           TRL  N+  +   VS + GS++    GE R+ F+R  +SF+  GL +EN+  E  A
Sbjct: 160 TRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLA 215


>SB_44556| Best HMM Match : RVP (HMM E-Value=2.3)
          Length = 305

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
 Frame = +1

Query: 34  TRL--NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATA 180
           TRL  N+  +   VS + GS++    GE R+ F+R  +SF+  GL +EN+  E  A
Sbjct: 239 TRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLA 294


>SB_7574| Best HMM Match : RVP (HMM E-Value=2.3)
          Length = 253

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
 Frame = +1

Query: 34  TRL--NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATA 180
           TRL  N+  +   VS + GS++    GE R+ F+R  +SF+  GL +EN+  E  A
Sbjct: 187 TRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLA 242


>SB_27063| Best HMM Match : GATA (HMM E-Value=2e-18)
          Length = 563

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 17/72 (23%), Positives = 32/72 (44%)
 Frame = -1

Query: 263 DLELDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAE 84
           DL+L  +SP++    +  + ++S      + + T FSR S P    +   L   I P+  
Sbjct: 483 DLKLSSSSPLMNQTSVISSSIISPMGHNGIHTPTAFSRPSMPGIPGIHPGLYGPIIPAPT 542

Query: 83  PTDAETLGTART 48
            +   T  ++ T
Sbjct: 543 SSAGSTYNSSST 554


>SB_7200| Best HMM Match : Tubulin-binding (HMM E-Value=5.1)
          Length = 294

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 272 RTRSWTSRQQLPREDPCLPDGLRSRGQPCSGV 367
           RT+SWT +    +++P +P  L      C GV
Sbjct: 223 RTKSWTFKSSQAKDNPRVPGHLDQTKGNCGGV 254


>SB_51535| Best HMM Match : W2 (HMM E-Value=4e-29)
          Length = 770

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 25/108 (23%), Positives = 43/108 (39%)
 Frame = -1

Query: 383 DELGDVLQNTADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLELDLTSPIVIAAPMSLTM 204
           D+ G ++ N A  G    + + D      D W+  A+  I      +SP +  +P S   
Sbjct: 309 DDFGGMMDNKAPYGLSYNEDEFDRF-TPKDPWAGLANTSIR-----SSPPLTGSPPSSRH 362

Query: 203 MLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLG 60
                   +  +    SR  PP    L T  ++ + P+ +   A+TLG
Sbjct: 363 PHYGGSPPSSRNQQYGSRRPPPRPIQLNTDGEISLRPARDSIAAKTLG 410


>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 688

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +2

Query: 323 LPDGLRSRGQPCSG--VRRPTRHQQITVNYSNDT 418
           +PD L  +GQPC G     P    Q+TV+Y   T
Sbjct: 342 VPDKLYIKGQPCLGKITSLPNTVGQLTVHYYTGT 375


>SB_33949| Best HMM Match : TFIIB (HMM E-Value=0.0018)
          Length = 720

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = +1

Query: 58  VPRVSASVGSAEGEIRIFSRVLRSFASGGLALENVVAEATASVSLADNIIVSDIGAAITI 237
           V  V AS+ +  G + +   +    A GG A+   +  A A   +    ++ D+GA + +
Sbjct: 528 VATVLASMAAKGGHVEVLKVMDEYCADGGEAMTEAMGAAAAEGQVGVVELLIDLGADVDV 587

Query: 238 G 240
           G
Sbjct: 588 G 588


>SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 470

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
 Frame = -1

Query: 302 VVDGWSNFASEEIDLELDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRA-SPPEAKD 126
           +VDG  +  S E+     +T+P   AA  + T   +  E  A A ATT + A +     +
Sbjct: 270 LVDGPCSTNSTELPATHTVTTPSPPAAIRATTTTATTTEAAATAEATTTATATTTATTTE 329

Query: 125 LRTRLKMRISPSAEPTDAETLGTARTKLS 39
                +   + +A  T A    TA T  S
Sbjct: 330 AAATAEATTTATATTTTAAITTTAATTTS 358


>SB_16815| Best HMM Match : TIL (HMM E-Value=0.39)
          Length = 225

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -1

Query: 296 DGWSNFASEEIDLELDLTSPIVIAAPMS--LTMMLSARETEAVASATTFSRA 147
           D W   A+   ++ +   SP   A PMS   ++  S+ +T  V+S+ T S A
Sbjct: 90  DDWKEIAAPPNEITVTTPSPSSTATPMSSVTSIQSSSAKTTQVSSSVTTSDA 141


>SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 848

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 338 RSRGQPCSGVRRPTRHQQIT--VNYSNDTCESKINYVLL 448
           ++R Q  SGVR+ TRH  +T  +   NDT  + I  +LL
Sbjct: 416 QARSQEGSGVRKKTRHSTVTSALIKENDTHTTFIFIMLL 454


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,502,917
Number of Sequences: 59808
Number of extensions: 228463
Number of successful extensions: 832
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 945255773
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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