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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30010
         (630 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.)              85   4e-17
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)                        30   1.3  
SB_30565| Best HMM Match : Metallothio (HMM E-Value=1.8)               30   1.3  
SB_35576| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)                       30   1.8  
SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0)                      29   2.4  
SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25)          29   2.4  
SB_20479| Best HMM Match : Collagen (HMM E-Value=1)                    29   2.4  
SB_11563| Best HMM Match : SNF7 (HMM E-Value=0.28)                     29   2.4  
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_47507| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_16478| Best HMM Match : C2 (HMM E-Value=2.2e-13)                    29   4.1  
SB_58665| Best HMM Match : TSP_1 (HMM E-Value=7.5e-10)                 29   4.1  
SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26)          29   4.1  
SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_28756| Best HMM Match : C1_4 (HMM E-Value=0.095)                    28   5.4  
SB_5030| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.2  
SB_41598| Best HMM Match : HLH (HMM E-Value=2.2)                       28   7.2  
SB_34777| Best HMM Match : VWA (HMM E-Value=0)                         28   7.2  
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_36437| Best HMM Match : Helicase_C (HMM E-Value=2e-13)              27   9.5  

>SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 744

 Score = 85.0 bits (201), Expect = 4e-17
 Identities = 50/96 (52%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
 Frame = +1

Query: 109 SALVRPLAAVPTHTQMVPAVPTQLS-AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXX 285
           +A +RP +       +VPA P   + A R FQT+S  +D+DSAAKF              
Sbjct: 61  TAAIRPQSQALVKA-VVPASPLLGALASRGFQTSSAVQDVDSAAKFIGAGAATVGAAGSG 119

Query: 286 XXXXXXFGSLIIGYARNPSLKQQLFSYAILGFALSE 393
                 FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 120 AGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSE 155


>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1850

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
 Frame = -1

Query: 375  QNG-V*EQLLLE--GGVPGIADDEGAEDCSNTS---SGTSYSHCRCTSTNEFGSRVNVLS 214
            QNG + E++L++  G + G  +       ++T    S T + H  CT  ++     + L 
Sbjct: 1728 QNGPIMEKILVQLPGSIAGYTNTNSGAAANSTDIPESRTCFDHDECTQYSQVQCNEDWLK 1787

Query: 213  DRCGLEGPHCRELCRDS 163
              C  +  +CR +C D+
Sbjct: 1788 INCPKKCKYCRPVCEDT 1804


>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
          Length = 2681

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
 Frame = -1

Query: 375 QNG-V*EQLLLE--GGVPGIADDEGAEDCSNTS---SGTSYSHCRCTSTNEFGSRVNVLS 214
           QNG + E++L++  G + G  +       ++T    S T + H  CT  ++     + L 
Sbjct: 52  QNGPIMEKILVQLPGSIAGYTNTNSGAAANSTDIPESRTCFDHDECTQYSQVQCNEDWLK 111

Query: 213 DRCGLEGPHCRELCRDS 163
             C  +  +CR +C D+
Sbjct: 112 INCPKKCKYCRPVCEDT 128


>SB_30565| Best HMM Match : Metallothio (HMM E-Value=1.8)
          Length = 565

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -1

Query: 243 EFGSRVNVLSDRCGLEGPHCR-ELCRDSRYHLCMGG 139
           E   R NVLSD  GLE   CR  LC +  +  C  G
Sbjct: 76  EASQRCNVLSDAPGLETESCRCTLCDERGFSACRSG 111


>SB_35576| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1315

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 15/84 (17%)
 Frame = -1

Query: 270  SHCRCTSTN---EFGSRVNVL-----SDRC--GLEGPHCRELCRDSRYHLCMGGYCCKWS 121
            ++C+C S+    E G  ++V+     +D C    +   C   C    Y  C+ G C KW 
Sbjct: 1151 ANCKCLSSKFACESGECIDVVGLCDGTDDCKDASDESRCDHKCSKDEYQ-CVSGACVKWP 1209

Query: 120  HQC---RVAEDG--RPGCRGDQSG 64
              C   +  EDG   PG  G Q G
Sbjct: 1210 LTCDGKKDCEDGTDEPGICGVQIG 1233


>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
          Length = 960

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
 Frame = -1

Query: 333 PGIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRC----------GLEGPH 187
           PG      ++ C  +  G + +H C CT+    G+R N ++ +C          G  GP 
Sbjct: 346 PGWTGPFCSKPCPPSLWGHNCAHPCNCTN----GARCNAVTGQCACTDGCSCNAGWTGPE 401

Query: 186 CRELC-RDSRYHLCMGGYCCKWSHQCRVAEDGRPGCRGDQSGGR 58
           CR+ C  DS    C     C  + +C  A  GR  C    +G R
Sbjct: 402 CRDPCGLDSWGPGCTNTCQCSRNGECDAA-SGRCACAPGFTGDR 444


>SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0)
          Length = 802

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 20/80 (25%), Positives = 31/80 (38%)
 Frame = -1

Query: 312 GAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYC 133
           G  D    + G+    CR        ++  +  + C      C +LCRD+      GGY 
Sbjct: 278 GCRDLCINTPGSFMCQCRQGYVLANDNKTCINLNECATRKHRCEQLCRDTD-----GGYY 332

Query: 132 CKWSHQCRVAEDGRPGCRGD 73
           C+     +V  DG   C G+
Sbjct: 333 CECHKGYQVGPDGM-SCIGN 351


>SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25)
          Length = 147

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
 Frame = -1

Query: 444 ESEEQQERH-HKTEQTHSLRQGETQNG--V*EQLLLEGGVPGIADDEGAEDCSNTSSGTS 274
           ES   Q  H H +   H   Q +  NG  V ++L  +G    + D     +C+  S+   
Sbjct: 23  ESCHMQPLHAHPSHSCHG-DQFQCLNGMCVGQELRCDGDYACV-DHSDERNCACRSAEFK 80

Query: 273 YSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAEDG 94
               +C   ++F +  +  +D  G +   C   C  S  H C  G C  WS  C    D 
Sbjct: 81  CPDGKCVHPSKFCNGESDCTD--GSDEWSCDNSC--SSRHACADGTCVTWSLTCNGVSDC 136

Query: 93  RPG 85
           + G
Sbjct: 137 QDG 139



 Score = 28.7 bits (61), Expect = 4.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 126 TCSSTHPYTDGTCCPYTALCSAV 194
           +CSS H   DGTC  ++  C+ V
Sbjct: 111 SCSSRHACADGTCVTWSLTCNGV 133


>SB_20479| Best HMM Match : Collagen (HMM E-Value=1)
          Length = 1214

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -1

Query: 474 VVVFLKVNSLESEEQQERHHKTEQTHSLRQGETQNG 367
           +V  LK    ESEE  E  H  EQ H  +Q +T NG
Sbjct: 208 LVPSLKKPRCESEEDDEEEHDLEQCHD-QQKDTSNG 242


>SB_11563| Best HMM Match : SNF7 (HMM E-Value=0.28)
          Length = 859

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
 Frame = -1

Query: 459 KVNSLESEEQQERHHKTEQTHSLRQGETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSS- 283
           K++ L+  E Q   H + +  +L     +N V    + +G       +EGAE     SS 
Sbjct: 204 KIDELDEIESQTSEHASNEMQNL---SFENNV--WTVTDGDKEQETGEEGAEPTPGESSP 258

Query: 282 --GTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCREL 175
             GT+ +      +++  +  N LS++C +   HC EL
Sbjct: 259 GAGTAPNALPNADSSKKLAEFNELSEKCRIMRVHCLEL 296


>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 5834

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 204  GLEGPHCRELCRDSRYHLCMG-GYCCKWSHQC 112
            G  G  C +LC+   +++C G G C +W+  C
Sbjct: 5392 GYWGEDCGKLCKGGIWNVCNGHGTCNRWTGDC 5423


>SB_47507| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 917

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -1

Query: 204 GLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAEDGR-PGCRGDQSGGRQ 55
           G + P   E CR   +  C    C +++HQC   E+G  P      S GR+
Sbjct: 365 GRDRPTSSEACRSWNFAKCFFPGC-RYTHQCAYCENGNYPARECPSSAGRK 414


>SB_16478| Best HMM Match : C2 (HMM E-Value=2.2e-13)
          Length = 186

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 113 HWCDHLQQYPPIHRWY-LLSLHSSLQCGPSRPHRSLRTL 226
           HW + +    PI RW+ L   H+SL   P+RP+R+ + +
Sbjct: 129 HWNEAMTAKKPIARWHSLREFHNSLL--PTRPNRTSKPI 165


>SB_58665| Best HMM Match : TSP_1 (HMM E-Value=7.5e-10)
          Length = 718

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 45  KQNAVCRQTDRPCSQVCHLLQLCTGATTCSSTHPYTDGTCCPYTALCSAVLPD 203
           ++  VC  TD+PC  + H ++ C   T   +T P    T C  T   S  +PD
Sbjct: 489 RRERVCSDTDKPCQGLDHEVRECQ-VTRPDTTTPTMPTTLC--TIHYSQXVPD 538


>SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26)
          Length = 351

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 126 TCSSTHPYTDGTCCPYTALCSAV 194
           +CSS H   DGTC  ++  C+ V
Sbjct: 111 SCSSRHACADGTCVTWSLTCNGV 133



 Score = 28.3 bits (60), Expect = 5.4
 Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
 Frame = -1

Query: 444 ESEEQQERH-HKTEQTHSLRQGETQNG--V*EQLLLEGGVPGIADDEGAEDCSNTSSGTS 274
           ES   Q  H H +   H   Q +  NG  V +++  +G    + D     +C+  S+   
Sbjct: 23  ESCHMQPLHAHPSHSCHG-DQFQCLNGMCVGQEVRCDGDYACV-DHSDERNCACRSAEFK 80

Query: 273 YSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAEDG 94
               +C   ++F +  +  +D  G +   C   C  S  H C  G C  WS  C    D 
Sbjct: 81  CPDGKCVHPSKFCNGESDCTD--GSDEWSCDNSC--SSRHACADGTCVTWSLTCNGVSDC 136

Query: 93  RPG 85
           + G
Sbjct: 137 QDG 139


>SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 564

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = -1

Query: 252 STNEFGSRVNVLS-DRCGLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAEDGRPGCRG 76
           ST E  +R+ ++S D+C  +   CR+ C+ S   + MG  C + + + ++A    P C G
Sbjct: 8   STQEKLTRIAIVSTDKC--KPKRCRQECKKSCPVVRMGKLCIEVTPETKLAAISEPLCIG 65


>SB_28756| Best HMM Match : C1_4 (HMM E-Value=0.095)
          Length = 201

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 183 RELCRDSRYHLCMGGYCCKWSHQCR 109
           R  CR    HLC+G   C+W  Q R
Sbjct: 173 RNGCRKCDVHLCVGDCFCEWHQQRR 197


>SB_5030| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 296

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 7/34 (20%)
 Frame = +3

Query: 267 GSSWFRSWYWNSLR--LPHH-----RLCQEPLPQ 347
           G +WF SW W  +   LPH+     + C E LP+
Sbjct: 261 GENWFLSWIWPKITSPLPHNGTDYTQACNEELPK 294


>SB_41598| Best HMM Match : HLH (HMM E-Value=2.2)
          Length = 519

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 261 RCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRY 157
           R T T +FG +VN+ S    LEG   R+   D+ +
Sbjct: 16  RATFTKDFGCQVNICSASASLEGEIQRQRNTDTNF 50


>SB_34777| Best HMM Match : VWA (HMM E-Value=0)
          Length = 1268

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = -1

Query: 444 ESEEQQERHHKTEQTHSLR----QGETQNGV*EQLLLEGGVPGIADDEGAE 304
           +  + QER  +TEQTH       QG+ Q    +Q  ++G   G + D+G E
Sbjct: 636 DQNQTQERQGQTEQTHGPDPGEVQGQEQGQGQDQSHVQGQEEGHSQDQGQE 686


>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 617

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 462 LKVNSLESEEQQERHHKTEQTHSLRQGETQN 370
           LK    E E+QQ +HHK E+     Q E Q+
Sbjct: 426 LKHQKQEEEQQQLQHHKQEEEQLKHQQEQQH 456


>SB_36437| Best HMM Match : Helicase_C (HMM E-Value=2e-13)
          Length = 479

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 100 FCNSALVRPLAAVPTHTQMVPAVPTQLSAVRSF 198
           +CN+ L R   +VP  T +VP   T L  V S+
Sbjct: 441 YCNNGLKRDGVSVPAFTTLVPEPRTSLYLVASW 473


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,313,613
Number of Sequences: 59808
Number of extensions: 488624
Number of successful extensions: 1768
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1762
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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