Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00027
(706 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 60 2e-09
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 55 6e-08
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 44 1e-04
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 38 0.008
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 35 0.074
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 33 0.17
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_14141| Best HMM Match : HH_signal (HMM E-Value=0) 31 0.91
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_33020| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_53398| Best HMM Match : RVT_1 (HMM E-Value=7.8e-12) 29 2.8
SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55) 29 3.7
SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_43314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_34159| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 28 6.4
SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 239 EGHRKIYKGDSYIILRTTSD-SRNNLSWDIHYWIGRESTQDESGAAAISTL 388
+ + K Y GDSYIIL T D + L +D+H+WIG++STQDE G AA T+
Sbjct: 883 DDYGKFYDGDSYIILNTYKDPEEDELKYDVHFWIGKDSTQDEYGTAAYKTV 933
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 239 EGHRKIYKGDSYIILRTTSDS-RNNLSWDIHYWIGRESTQDESGAAAISTL 388
E + Y GDSYIIL T +S + L +D+H+WIG++STQDE G AA T+
Sbjct: 494 EDYGSFYDGDSYIILNTYKESGEDELKYDVHFWIGKDSTQDEYGTAAYKTV 544
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1
Query: 385 VGLDDKFGGTAVQHRETMGHESALFLSYFQTPLTYLEGG 501
V LD +QHRE G ES LF SYF++ LT L+GG
Sbjct: 544 VELDIHLNDKPIQHREVQGFESKLFKSYFKS-LTILKGG 581
Score = 35.9 bits (79), Expect = 0.032
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 9/202 (4%)
Frame = +3
Query: 126 DKNA-RDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGK---STKEIHTSFYGRP 293
+KN R+ A A+ N G G+QIWRI+ F+ +++D G I + Y
Sbjct: 455 EKNVKREAAATEIAWKNAGTREGLQIWRIEKFKVKVWSREDYGSFYDGDSYIILNTYKES 514
Query: 294 RTVATIYHGISTTGSVGSRRKTSQEPPQFQRWPGRQVRGHSGPAPRDHGSRKCFVPIIFP 473
Y G + ++Q+ + ++ H P H + F +F
Sbjct: 515 GEDELKYDVHFWIG-----KDSTQDEYGTAAYKTVELDIHLNDKPIQHREVQGFESKLFK 569
Query: 474 D---TLDLFGGRESVGFNHVVTNAGAQKRMFQVKGK--RDVRVRQVDPQIASMNKGDCFV 638
+L + G GF HV + R+ +V+G + V +V +S+ D F+
Sbjct: 570 SYFKSLTILKGGVDSGFRHVKPQE-YKPRLLRVRGTTVSNCVVEEVLLARSSLCSEDVFI 628
Query: 639 LSLDNDIYVFVGEKAKNVEKLK 704
L ++Y++VG K EK +
Sbjct: 629 LDKGLNLYLWVGVKCDKDEKFR 650
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 54.8 bits (126), Expect = 6e-08
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = +2
Query: 239 EGHRKIYKGDSYIILRTTSDSRNN--LSWDIHYWIGRESTQDESGAAAISTLAWTT 400
E + + Y GDSYIIL T + + L +D+H+WIGR STQDE G AA T+ T
Sbjct: 539 EKYGQFYAGDSYIILWTYEEKEDTEKLCYDLHFWIGRGSTQDEYGTAAYKTVELDT 594
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 385 VGLDDKFGGTAVQHRETMGHESALFLSYFQTPLTYLEGG 501
V LD VQHRE M HES +F +YF++ +TYL+GG
Sbjct: 590 VELDTYLNDVPVQHREIMNHESDMFKTYFKS-ITYLKGG 627
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 111 ITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFE 221
++ ++ + + A+ A+ N G G+QIWRI F+
Sbjct: 496 LSEVTHEVKKSAAEGEVAWKNAGEKVGLQIWRINKFK 532
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 44.0 bits (99), Expect = 1e-04
Identities = 16/46 (34%), Positives = 31/46 (67%)
Frame = +3
Query: 567 GKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLK 704
G+R+++ R ++P S N GDC+VL ++++ +VG+ A +E+ K
Sbjct: 1457 GRRNIQTRLIEPCQKSFNSGDCYVLVTKDELFAWVGKHANAIERAK 1502
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 37.9 bits (84), Expect = 0.008
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 281 LRTTSDSRNNLSWDIHYWIGRESTQDESG 367
L+T D + L W I+YWIG+E++++E G
Sbjct: 260 LKTELDETDQLFWQIYYWIGKEASREEQG 288
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 34.7 bits (76), Expect = 0.074
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 230 RCSEGHRKIY-KGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAISTL 388
+C+ + I+ GDSY+++ T R I++W G +S E GAAA T+
Sbjct: 172 QCNTAAKGIFFSGDSYLVVYTYRTQRGQKKSIIYFWKGNDSRVFEKGAAAKLTV 225
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 126 DKNAR-DKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIG 251
+KN + + A+ PA+ G+ GVQ+WRI F+ ++D G
Sbjct: 347 EKNVKKESAEGEPAWEGAGKEVGVQVWRIVKFKVTHWPKQDYG 389
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 31.5 bits (68), Expect = 0.69
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 594 VDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLK 704
V+ S+NKGD F+L +IY + G + VE++K
Sbjct: 48 VELHYKSLNKGDVFILDDGLNIYCWNGSQCSRVERMK 84
>SB_14141| Best HMM Match : HH_signal (HMM E-Value=0)
Length = 754
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 257 YKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAISTLA 391
Y GDSY+IL D N +H G+ ++ DE AA +A
Sbjct: 678 YDGDSYVILDYRKDKTNKKQPVLHILHGKNASTDELFFAATKAIA 722
>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2516
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 306 TIYHGISTTGSVGSRRKTSQEPPQFQRWPGRQVRGHSGPAP 428
T++ G++ GS+ + P QF RW + HSG P
Sbjct: 1368 TLWIGLNDRGSISGHLWSDGTPVQFTRWGPAEPDSHSGQQP 1408
>SB_33020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 216 FEPIPVAQKDIGKSTKEIHTSFYGRPRTVATIYHGI-STTGSVGSRRKTSQEPPQFQRWP 392
F+ + VA K + ++ +H R + + STT R+KT + + W
Sbjct: 595 FDRLQVAYKVLRRTYSMVHIKISKRIAFANQVLSTVQSTTDICTQRKKTRTQTRDRKAWK 654
Query: 393 GRQVRGHSGPAPRDH 437
++ HS P+P H
Sbjct: 655 PERMFVHSSPSPAPH 669
>SB_53398| Best HMM Match : RVT_1 (HMM E-Value=7.8e-12)
Length = 924
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/65 (21%), Positives = 36/65 (55%)
Frame = +3
Query: 480 LDLFGGRESVGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDI 659
L +GGR+ + + ++ A K + ++ R + + ++ ++ ++KGD +L+ ND+
Sbjct: 315 LSAYGGRKYRCWENALSLANKAKPLIGLETCRILELIKIGRNVSEISKGDAEILNEFNDV 374
Query: 660 YVFVG 674
+ +G
Sbjct: 375 FEGLG 379
>SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 329 YWIGRESTQDESGAAAISTLAWTTSSGAQ 415
+W G +ST +E GAAA+ T+ + G Q
Sbjct: 37 FWQGHDSTVNEKGAAALMTVEIDSEKGPQ 65
>SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 329 YWIGRESTQDESGAAAISTLAWTTSSGAQ 415
+W G +ST +E GAAA+ T+ + G Q
Sbjct: 197 FWQGHDSTVNEKGAAALMTVEIDSEKGPQ 225
>SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +1
Query: 202 GEYRTSNQY-PLLRRT*--ENLQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVR 366
G+ R Y P+ RT QRR+IH T G+S+ PL R+ V++R R
Sbjct: 781 GKSRNRRPYIPMATRTAVESRNQRRYIHMTTSTTGKSRNRRPYIPLATRTAVESRNQR 838
>SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55)
Length = 2153
Score = 29.1 bits (62), Expect = 3.7
Identities = 25/101 (24%), Positives = 43/101 (42%)
Frame = +2
Query: 170 QCRQNSRCANMENTELRTNTRCSEGHRKIYKGDSYIILRTTSDSRNNLSWDIHYWIGRES 349
+ R+NS + T+ TR + R+ K Y LRT SD DI +
Sbjct: 1903 EIRENSGTNQPQTTDKPKETRSQKRRRRREKAKLYASLRTPSD-------DI---VLAND 1952
Query: 350 TQDESGAAAISTLAWTTSSGAQRSSTERPWVTKVLCSYHIS 472
+++E+G A ++ + + A + + P K LC I+
Sbjct: 1953 SKEENGRAIVTEIDKAIAKAALTTCMDLPGADKGLCVNEIT 1993
>SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +1
Query: 64 PSGHGRRPSLRR*AGRSHRCQIKTPVTKPKSIRLLPMSAEQPVCKYGEYRTSNQYPL 234
P+G ++PS +G+ + Q +TP++ KSI +P ++++P + S Q+PL
Sbjct: 1317 PNGQLKQPSSIINSGQLQQLQYRTPISANKSI--IPQTSQEPTSS----QQSCQHPL 1367
>SB_43314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 493 EGGNPSVLTTSSRTREPRNECSRSKGSEMSALDKSIRR 606
+GGNP T++ T P N C+ S ++ S LDK + +
Sbjct: 49 DGGNP----TATPTPSPVNRCASSAEAKRSGLDKFLNK 82
>SB_34159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = +3
Query: 69 WARTATKPQEISG----PITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNF--EPIP 230
W K EI G P+ N+ D+A + A + + AG Q W + + + +P
Sbjct: 69 WREFTGKWNEIYGNNLPPLAFYCVLNSTDRAALELAISTMEAFAGYQSWGVSHVPKDDVP 128
Query: 231 VAQKDIGKST 260
VA +G +T
Sbjct: 129 VAHSIVGMAT 138
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 28.3 bits (60), Expect = 6.4
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +2
Query: 401 SSGAQRSSTERPWVTKVLCSYHISRHP*PIWREGIRRF*PRRH-----ERGSPETNVPGQ 565
++G+ R+S P T V SR RE R PRRH ERG+ T P
Sbjct: 369 NTGSSRTSLT-PSTTSVPAPVRPSRTTSTRARERADRELPRRHSHGPNERGANRTGPPQS 427
Query: 566 REARCPR*TSRSADS 610
R+A TS +ADS
Sbjct: 428 RQAVPRHRTSATADS 442
>SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 139 VTKPKSIRLLPMSAEQPVCKYGEYRTSNQYPLLRRT*ENL 258
+T K RLL +A +P+ K R++N+Y ++ +NL
Sbjct: 129 ITSTKEERLLVSTASKPIVKLSYNRSNNKYSYTGQSDDNL 168
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,665,670
Number of Sequences: 59808
Number of extensions: 558365
Number of successful extensions: 1696
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1693
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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