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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00025
         (721 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16819| Best HMM Match : BIR (HMM E-Value=7.5e-30)                   62   4e-10
SB_12329| Best HMM Match : No HMM Matches (HMM E-Value=.)              54   2e-07
SB_39662| Best HMM Match : BIR (HMM E-Value=1.2e-19)                   52   4e-07
SB_31352| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   3e-06
SB_28819| Best HMM Match : BIR (HMM E-Value=2.6e-32)                   42   7e-04
SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09)               40   0.002
SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.003
SB_12327| Best HMM Match : No HMM Matches (HMM E-Value=.)              39   0.005
SB_14518| Best HMM Match : MIB_HERC2 (HMM E-Value=2.4e-38)             36   0.033
SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0)                    33   0.18 
SB_3322| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.31 
SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11)                  31   0.94 
SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.2  
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)                      30   1.6  
SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012)             30   2.2  
SB_50584| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.9  
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)                 29   2.9  
SB_20928| Best HMM Match : NHL (HMM E-Value=0)                         29   3.8  
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)                29   3.8  
SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14)                 29   3.8  
SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027)               29   5.0  
SB_41371| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_40870| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_43507| Best HMM Match : DUF35 (HMM E-Value=7.6)                     28   8.8  
SB_11394| Best HMM Match : GntR (HMM E-Value=7.9)                      28   8.8  
SB_45116| Best HMM Match : EGF (HMM E-Value=0)                         28   8.8  

>SB_16819| Best HMM Match : BIR (HMM E-Value=7.5e-30)
          Length = 514

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 21/44 (47%), Positives = 30/44 (68%)
 Frame = +2

Query: 113 KPEELAEAGFFYTGQGDKTKCFYCDGGLKDWESDDVPWEQHARW 244
           +P EL+ AGF+Y G  D  KC+ C   L++WE DD+PW +H +W
Sbjct: 148 RPWELSSAGFYYLGDQDSVKCYKCGVALRNWEPDDLPWVEHEKW 191



 Score = 44.4 bits (100), Expect = 9e-05
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 376 QEGEKHLDDSKICKICYSEERNVCFVPCGHVVACAKCALSTDKC 507
           Q+  + + + ++CKIC   E  + F+PCGH+  C  CA   + C
Sbjct: 461 QQKLERMQEERLCKICMDAEVGIVFLPCGHLSCCPGCAEGMELC 504


>SB_12329| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 197

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 21/57 (36%), Positives = 32/57 (56%)
 Frame = +1

Query: 352 NDSTNNVAQEGEKHLDDSKICKICYSEERNVCFVPCGHVVACAKCALSTDKCRCVAG 522
           N S++   QE    L+D   CK+C  E+ N   +PCGH+V C +CA++ + C    G
Sbjct: 126 NASSDYSLQEKLSKLEDGLRCKVCMDEQINAVLIPCGHMVCCEQCAMNLEACPVCRG 182


>SB_39662| Best HMM Match : BIR (HMM E-Value=1.2e-19)
          Length = 314

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = +2

Query: 122 ELAEAGFFYTGQGDKTKCFYCDGGLKDWESDDVPWEQHARWF 247
           ELA AGF +TG+ D  +CF C G LK W+ DD P E H  ++
Sbjct: 155 ELARAGFVFTGRDDVVECFKCKGTLKQWKVDDRPIESHREFY 196


>SB_31352| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 401

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +1

Query: 391 HLDDSKICKICYSEERNVCFVPCGHVVACAKCALSTDKC 507
           HL D++IC+IC   E    F PCGHVV C +C+    +C
Sbjct: 345 HLQDARICQICMDVEVATAFCPCGHVVCCVECSALCKEC 383


>SB_28819| Best HMM Match : BIR (HMM E-Value=2.6e-32)
          Length = 141

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +2

Query: 104 CAXKPEELAEAGFFYTGQGDK---TKCFYCDGGLKDWESDDVPWEQHAR 241
           C    E++A AGF++    D     +CF C   L  WE +D PW++H +
Sbjct: 30  CKCTAEKMAAAGFYHCETDDDPDVARCFVCFKELDGWEPEDDPWQEHKK 78


>SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09)
          Length = 474

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +1

Query: 412 CKICYSEERNVCFVPCGHVVACAKCALSTDKC 507
           C+IC   E N  F PCGHV  C  CA +   C
Sbjct: 406 CQICMDAEVNTAFCPCGHVYCCQTCASNLYYC 437



 Score = 32.7 bits (71), Expect = 0.31
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 412 CKICYSEERNVCFVPCGHVVACAKCALSTDKC 507
           C  C   + +  F PCGH++ C++CA +   C
Sbjct: 349 CSKCNVNDCDTLFCPCGHLMFCSRCADNMKFC 380


>SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 585

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 412 CKICYSEERNVCFVPCGHVVACAKCALSTDKCRCVAG 522
           C IC   +RNV  + CGHV +C  CA    +C    G
Sbjct: 538 CVICLENQRNVVLLNCGHVCSCRTCAQQIHQCPVCRG 574


>SB_12327| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 64

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 394 LDDSKICKICYSEERNVCFVPCGHVVACAKCALSTDKC 507
           L  +  CK+C    +N  ++PC H  AC +CAL +  C
Sbjct: 11  LKSAMCCKVCEKRWKNSTYLPCLHTEACIECALKSMTC 48


>SB_14518| Best HMM Match : MIB_HERC2 (HMM E-Value=2.4e-38)
          Length = 742

 Score = 35.9 bits (79), Expect = 0.033
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 412 CKICYSEERNVCFVPCGHVVACAKCALSTDKC 507
           C +C  ++  + F PC H+VAC  C     KC
Sbjct: 625 CMVCSEKKSQLLFKPCNHMVACEGCGSLMKKC 656


>SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0)
          Length = 636

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +1

Query: 421 CYSEERNVC-FVPCGHVVACAKCALSTDKC-RCVAGRSRMRCGSTS 552
           C  ++   C F+PCGH + C +C     KC +C      ++C S+S
Sbjct: 449 CLCDKSVDCKFMPCGHSIVCYECGNMFKKCYKCKVDVESIQCVSSS 494


>SB_3322| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 777

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 397 DDSKI-CKICYSEERNVCFVPCGHVVACAKCA 489
           DD+ + C IC S+ R+   +PC H+  C  CA
Sbjct: 243 DDNVLECVICMSDFRDTLILPCRHLCLCKACA 274


>SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11)
          Length = 439

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = +1

Query: 445 CFVPCGHVVACAKCALSTDKCRCVAGRSRMRCGSTSRERTLLASCILVTSPGGPEAC 615
           C VPC H     +C  + DKC C    S   CG T        S +  T   GP+ C
Sbjct: 10  CSVPCSH----GRCTTAPDKCECEKYWSGADCG-TYIGTCNNCSSVGGTCSAGPDTC 61


>SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 486

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 385 EKHLDDSKICKICYSEERNVCFVPCGHVVACAKC 486
           ++ +D  ++C IC +   +V F+PC H V+C  C
Sbjct: 421 QESVDVDELCPICCAMRISVRFLPCRH-VSCRSC 453


>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
          Length = 695

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 406 KICKICYSEERNVCFVPCGHVVACAKC 486
           ++CKIC    ++V   PCGH++ C  C
Sbjct: 183 QLCKICAENNKDVRIEPCGHLM-CHLC 208


>SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 867

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 406 KICKICYSEERNVCFVPCGHVVACAKC 486
           ++CKIC    ++V   PCGH++ C  C
Sbjct: 379 QLCKICAENNKDVRIEPCGHLM-CHLC 404


>SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012)
          Length = 489

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
 Frame = +1

Query: 412 CKI-CYSEERNVCFVPCGHVVACAKCALSTDKCR--CVAGRSRMRCG---STSRERTLLA 573
           CK+ CY EE   C   C        C  ++  C   C+ GR  MRCG       ++ L  
Sbjct: 110 CKMECYGEE---CHQTCQSSGCDVTCPAASKVCVQVCITGRCTMRCGRGVGRCEQKCLAG 166

Query: 574 SCILV 588
            C ++
Sbjct: 167 KCAMI 171


>SB_50584| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 193

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -3

Query: 539 HRIRER---PATHRHLSVDSAHLAHATTWPHGTKHTL 438
           H IR     P   RH +  + ++ H  T PH T+HT+
Sbjct: 25  HNIRHTITTPHNIRHTTTTTHNIRHTITTPHNTRHTI 61


>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
          Length = 654

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 412 CKICYSEERNVCFVPCGHVVACAKCALSTDKCRCV 516
           C  C       C +PCGH V C KC   +   +CV
Sbjct: 101 CVRCCGILLGPCTLPCGHTV-CEKCLSKSQAKKCV 134


>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
          Length = 795

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = +1

Query: 370 VAQEGEKHLDDSKICKICYSEERNVCFVPCGHVVACAKCALSTDKCRCVAGRSRMRCGST 549
           +A+  + ++   ++C  C +   N   +PC H   C++C LS +  R   GR  + C   
Sbjct: 1   MAEGFDHYIQPPEVCPKCMNAYENPKVLPCLHTF-CSQC-LSEELHRDCEGRLNVTCPKC 58

Query: 550 SRE 558
            R+
Sbjct: 59  LRD 61


>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
          Length = 470

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 370 VAQEGEKHLDDSKICKICYSEERNVCFVPCGHVVACAKC 486
           +A+ G K L+D   C IC     +   +PC H   C  C
Sbjct: 1   MAKPGSKQLEDEVTCAICIEHFTDPRLLPCLHTF-CRHC 38


>SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14)
          Length = 635

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +1

Query: 457 CGHVVACA---KCALSTDKCRCVAGRSRMRC 540
           C  V ACA   KC++ + +C C+AG     C
Sbjct: 257 CAKVCACADTEKCSVVSGECTCIAGSCSSSC 287


>SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027)
          Length = 442

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
 Frame = +1

Query: 412 CKI-CYSEERNVCFVPCGHVVACAKCALSTDKCR--CVAGRSRMRCG---STSRERTLLA 573
           CK+ CY +E   C   C        C  ++  C   C+ GR  MRCG       ++ L  
Sbjct: 110 CKMECYGDE---CHQTCQSSGCDVTCPAASKVCVQVCITGRCTMRCGRGVGRCEQKCLAG 166

Query: 574 SCILV 588
            C ++
Sbjct: 167 KCAMI 171


>SB_41371| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 362

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 454 PCGHVVACAKCALSTDKCRCVAGRSRMRCGST 549
           PC +   CA  + S   C+C AG     C ST
Sbjct: 254 PCQNNGTCAALSASDYNCKCPAGFGGTECNST 285


>SB_40870| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 431

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 532 MRCGSTSRERTLLASCILVTSPGGP 606
           M CG+ + E  + A+CI   +PG P
Sbjct: 207 MACGTCANENAIKAACIWYRAPGSP 231


>SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 397

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 21/70 (30%), Positives = 31/70 (44%)
 Frame = -3

Query: 653 NHRIRGFVRRLFQHASGPPGEVTSIQLARRVLSREVEPHRIRERPATHRHLSVDSAHLAH 474
           +H I  +   + +H +   G VTS Q    + SR +   R      +H+HL   S    H
Sbjct: 292 SHHISTWCHAVSRHVTSTHG-VTSHQY---LASRHISTWR---HVTSHQHLVSRSVTSYH 344

Query: 473 ATTWPHGTKH 444
            +TW H T H
Sbjct: 345 ISTWRHVTSH 354


>SB_43507| Best HMM Match : DUF35 (HMM E-Value=7.6)
          Length = 326

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
 Frame = +1

Query: 394 LDDSKICKICYSEERNVCFVPCGHVVACAK----CALSTDKCRCVAGRSRMRCGSTSRER 561
           L D    K+  +E R   F   G  +        C L   K RCV+GRS +   S+++ R
Sbjct: 263 LYDRTSSKLTVNEARKQLFAQKGRPLEALPPSKGCTLRAHKARCVSGRSLLGAVSSAKSR 322


>SB_11394| Best HMM Match : GntR (HMM E-Value=7.9)
          Length = 451

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = +1

Query: 418 ICYSEERNVCF----VPCGHVVACAKCALSTDKCRCVAGRSRMRCGSTSRERTLLASCIL 585
           +CYS  R VC+      C   V C  C ++   CR V    R+ C S  R     +SC +
Sbjct: 219 VCYSC-RVVCYSCRVACCSCRVVCYSCRVACCSCRVVCYSCRVACCS-CRVHMKCSSCRV 276

Query: 586 VTS 594
           V S
Sbjct: 277 VCS 279


>SB_45116| Best HMM Match : EGF (HMM E-Value=0)
          Length = 2023

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +1

Query: 457 CGHVVACA-KCALSTDKCRCVAGRSRMRC 540
           C H   C   C+  T +CRCVAG +   C
Sbjct: 132 CVHGGTCEFDCSTLTSRCRCVAGYTGEHC 160


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,566,726
Number of Sequences: 59808
Number of extensions: 473117
Number of successful extensions: 1761
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1747
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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