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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a05f
         (669 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56628| Best HMM Match : Actin (HMM E-Value=0)                      388   e-108
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)             383   e-107
SB_56| Best HMM Match : Actin (HMM E-Value=0)                         382   e-106
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)              381   e-106
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)              350   5e-97
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)             201   4e-52
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)             183   1e-46
SB_54| Best HMM Match : Actin (HMM E-Value=0)                         159   2e-39
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)            144   4e-35
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)                    121   6e-28
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)                 103   1e-22
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)                  60   2e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)                  58   6e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)                 57   1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)               56   2e-08
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)                 47   1e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   5e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)                  41   0.001
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.64 
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.64 
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)                     31   0.64 
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)                      31   0.64 
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.64 
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)                    31   0.64 
SB_21074| Best HMM Match : NadA (HMM E-Value=2)                        31   0.85 
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)                       31   0.85 
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.85 
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)                    31   1.1  
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)          31   1.1  
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)                    31   1.1  
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)                    30   1.5  
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.5  
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.5  
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)              30   1.5  
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   1.5  
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.5  
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)                     30   1.5  
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)                 30   1.5  
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)              30   1.5  
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.0  
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.0  
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.6  
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)                  29   3.4  
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)                   29   3.4  
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)                 29   3.4  
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)                  29   4.5  
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)                 29   4.5  
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.5  
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.5  
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.0  
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.0  
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.9  

>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
          Length = 376

 Score =  388 bits (956), Expect = e-108
 Identities = 179/185 (96%), Positives = 184/185 (99%)
 Frame = +3

Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 474 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLD 653
           TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180

Query: 654 LAGRD 668
           LAGRD
Sbjct: 181 LAGRD 185


>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score =  383 bits (943), Expect = e-107
 Identities = 177/185 (95%), Positives = 183/185 (98%)
 Frame = +3

Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
           M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 474 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLD 653
           TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180

Query: 654 LAGRD 668
           LAGRD
Sbjct: 181 LAGRD 185


>SB_56| Best HMM Match : Actin (HMM E-Value=0)
          Length = 375

 Score =  382 bits (941), Expect = e-106
 Identities = 177/183 (96%), Positives = 182/183 (99%)
 Frame = +3

Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
           ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 479
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 480 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLA 659
           IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 660 GRD 668
           GRD
Sbjct: 182 GRD 184


>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score =  381 bits (938), Expect = e-106
 Identities = 176/183 (96%), Positives = 182/183 (99%)
 Frame = +3

Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
           +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 479
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 480 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLA 659
           IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 660 GRD 668
           GRD
Sbjct: 182 GRD 184


>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 349

 Score =  350 bits (861), Expect = 5e-97
 Identities = 160/167 (95%), Positives = 166/167 (99%)
 Frame = +3

Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
           M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 474 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 614
           TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIY
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIY 167


>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score =  201 bits (491), Expect = 4e-52
 Identities = 93/182 (51%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
 Frame = +3

Query: 132 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 305
           + +V DNG+G  K G+AG + P  +FPS+VGRP  R    +  +  KD  VGDEA   R 
Sbjct: 7   SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66

Query: 306 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 482
           +L + YP+++GIV NWDDM+ +W +TF  +++ + P    VLLTE PLNP  NREKM ++
Sbjct: 67  MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126

Query: 483 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAG 662
           MFE +    +Y+AIQAVL+LYA G  TG+V+DSGDGV+H  P+Y G+ALPH   RLD+AG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAG 186

Query: 663 RD 668
           RD
Sbjct: 187 RD 188


>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score =  183 bits (445), Expect = 1e-46
 Identities = 83/89 (93%), Positives = 86/89 (96%)
 Frame = +3

Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
           D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 386
           RGILTLKYPIEHGIVTNWDDMEKI   TF
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIMFETF 90



 Score =  129 bits (312), Expect = 2e-30
 Identities = 60/70 (85%), Positives = 66/70 (94%)
 Frame = +3

Query: 459 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHA 638
           N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHA
Sbjct: 78  NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137

Query: 639 ILRLDLAGRD 668
           I+RLDLAGRD
Sbjct: 138 IIRLDLAGRD 147


>SB_54| Best HMM Match : Actin (HMM E-Value=0)
          Length = 2486

 Score =  159 bits (386), Expect = 2e-39
 Identities = 72/101 (71%), Positives = 84/101 (83%)
 Frame = +3

Query: 366  KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 545
            K+W H F ++LRV  E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188

Query: 546  ASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRD 668
            ASGRTTG V D GDGVSHTVP+Y GY LPHA  R+DLAGRD
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRD 2229



 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 23/34 (67%), Positives = 30/34 (88%)
 Frame = +3

Query: 138  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 239
            +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130


>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
          Length = 367

 Score =  144 bits (350), Expect = 4e-35
 Identities = 60/85 (70%), Positives = 78/85 (91%)
 Frame = +3

Query: 414 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 593
           +HPVLLTEAPLNP+ NREK  ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185

Query: 594 SHTVPIYXGYALPHAILRLDLAGRD 668
           SH+VPIY G+A+PH+I+R D+AGRD
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRD 210


>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
          Length = 152

 Score =  121 bits (291), Expect = 6e-28
 Identities = 56/63 (88%), Positives = 59/63 (93%)
 Frame = +3

Query: 480 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLA 659
           IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIY GYALPHAILRLDLA
Sbjct: 1   IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60

Query: 660 GRD 668
           GRD
Sbjct: 61  GRD 63


>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
          Length = 240

 Score =  103 bits (248), Expect = 1e-22
 Identities = 45/113 (39%), Positives = 74/113 (65%)
 Frame = +3

Query: 324 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 503
           PI+ G++ +WD  EKI  + +   ++     HP+L++EA  N +  REK+T++MFE +N 
Sbjct: 3   PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62

Query: 504 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAG 662
           PA ++   +VL+ +A+GR+ G+V+DSG   +  VP++ GY L  AI+R  LAG
Sbjct: 63  PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAG 115


>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
          Length = 1392

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 27/39 (69%), Positives = 29/39 (74%)
 Frame = +3

Query: 123  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 239
            E    LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392


>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
          Length = 580

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
 Frame = +3

Query: 126 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 305
           ++A LV+D G+   K GFA + APR++ P+ + + + +       ++  ++GD+ +  + 
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283

Query: 306 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 479
              L Y  P + G + NWD  ++IW +TF  E                       + M +
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDE 323

Query: 480 IMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYXGYALPHAI 641
           I+FE +N  A+     A LS Y       S     +V+D+G   +H VP++ G  +  A+
Sbjct: 324 ILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAV 383

Query: 642 LR 647
            R
Sbjct: 384 RR 385


>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
          Length = 921

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
 Frame = +3

Query: 108 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 278
           FK+      A+V+DNG G+ K GFAGD  PR + P++VG P+   +++G  +  KD    
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752

Query: 279 GDEAQSKRGILTL 317
           GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 20/46 (43%), Positives = 26/46 (56%)
 Frame = +3

Query: 525 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAG 662
           Q  LSLYASG T G+ L SG   +    IY G+ L H +  L++ G
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGG 812


>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
          Length = 372

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 26/60 (43%), Positives = 34/60 (56%)
 Frame = +3

Query: 252 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 431
           G+   D ++GDEA  K    T K+PI H IV +WD ME+ W    +  LR  PE+H  LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336



 Score = 32.3 bits (70), Expect = 0.37
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 561 TGIVLDSGDGVSHTVPI 611
           TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372


>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
          Length = 543

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = +3

Query: 492 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRD 668
           ++ T A+     +  S     RT TG V+DSGDGV+H +P+  GY +   I  + +AGRD
Sbjct: 38  SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97


>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 198

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = -2

Query: 236 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 120
           MA  + D GE+G+ SI+S ETGLAHTGAI+  Q  +  V
Sbjct: 1   MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39


>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
          Length = 766

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
 Frame = +3

Query: 369 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 548
           I  H F + L+V P +H V++T         +E++ +I+   F   A+Y+  Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571

Query: 549 SGRTTGI----VLDSGDGVSHTVPIYXGYALP 632
               +GI    V D  D +  T      Y LP
Sbjct: 572 YSAVSGIVEQRVTDGTDEIHSTDVNLAKYNLP 603


>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 220

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +3

Query: 315 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 467
           L+ P +  +VT+++  E++  H F +     P    HPV++TE   NP   R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183


>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 120

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -3

Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
          Length = 534

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 12/39 (30%), Positives = 25/39 (64%)
 Frame = +3

Query: 456 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 572
           A +E++ +I+   F   A+Y+  Q++L++Y+    +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458


>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
          Length = 272

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -2

Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
           V+PV   S  D     +  S   +C      V+LSH + H  M     D  +HG RS  S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251

Query: 182 CETGLAHT 159
           CET L  T
Sbjct: 252 CETQLVPT 259


>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 172

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 16/73 (21%), Positives = 30/73 (41%)
 Frame = -3

Query: 661 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 482
           P+   +  +W    P    T W +PSP+  T     P    ++T+W +        +S++
Sbjct: 93  PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152

Query: 481 IWVIFSLLALGLR 443
             +I  L  +  R
Sbjct: 153 YHIIGRLSGVHYR 165



 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = -3

Query: 661 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 524
           P    +     S +P    T W +PSP+  T     P    ++T+W
Sbjct: 57  PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102



 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = -3

Query: 661 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 524
           P+   +  +W S  P    T W  P P+  T     P    ++T+W
Sbjct: 81  PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126


>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
          Length = 170

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -3

Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
          Length = 358

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -2

Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
           V+PV   S  D     +  S   +C      V+LSH + H  M     D  +HG RS  S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309

Query: 182 CETGLAHT 159
           CET L  T
Sbjct: 310 CETQLVLT 317


>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 402

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -2

Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
           V+PV   S  D     +  S   +C      V+LSH + H  M     D  +HG RS  S
Sbjct: 71  VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129

Query: 182 CETGLAHT 159
           CET L  T
Sbjct: 130 CETQLVLT 137


>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 458

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -2

Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
           V+PV   S  D     +  S   +C      V+LSH + H  M     D  +HG RS  S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163

Query: 182 CETGLAHT 159
           CET L  T
Sbjct: 164 CETQLVLT 171


>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 591

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -2

Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
           V+PV   S  D     +  S   +C      V+LSH + H  M     D  +HG RS  S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446

Query: 182 CETGLAHT 159
           CET L  T
Sbjct: 447 CETQLVLT 454


>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
          Length = 339

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -2

Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
           V+PV   S  D     +  S   +C      V+LSH + H  M     D  +HG RS  S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287

Query: 182 CETGLAHT 159
           CET L  T
Sbjct: 288 CETQLVLT 295


>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
          Length = 466

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
 Frame = -3

Query: 601 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 449
           VWE  T  P + T+P +  D        Y  S +W+      VL   N ++++F   +LG
Sbjct: 3   VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61

Query: 448 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 284
           L  A +  T C    T  +L  +    ++++SQ+  + C +   R    +LL AS
Sbjct: 62  LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115


>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
          Length = 570

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -2

Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
           V+PV   S  D     +  S   +C      ++LSH + H  M     D  +HG RS  S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211

Query: 182 CETGLAHT 159
           CET L  T
Sbjct: 212 CETQLVLT 219


>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
          Length = 419

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = -2

Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
           EG +P +     V+PV   S  D     +  S   +C      ++LSH + H L A    
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268

Query: 218 DRGEHGARSIISCETGLAHT 159
              +HG R  +SCET L  T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288


>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 749

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
           GNT R    PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563


>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1259

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 440 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 532
           SP P+   R D+P  V     A HV  HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295


>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
          Length = 330

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = -2

Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
           EG +P +     V+PV   S  D     +  S   +C      ++LSH + H L A    
Sbjct: 71  EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129

Query: 218 DRGEHGARSIISCETGLAHT 159
              +HG R  +SCET L  T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149


>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2396

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = -2

Query: 386  EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
            EG +P +     V+PV   S  D     +  S   +C      ++LSH + H L A    
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667

Query: 218  DRGEHGARSIISCETGLAHT 159
               +HG R  +SCET L  T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687


>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 859

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = -2

Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
           EG +P +     V+PV   S  D     +  S   +C      ++LSH + H L A    
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695

Query: 218 DRGEHGARSIISCETGLAHT 159
              +HG R  +SCET L  T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715


>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
          Length = 277

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +1

Query: 520 PSKPCSRCTRPVVPP 564
           P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234


>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
          Length = 1492

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = -2

Query: 386  EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
            EG +P +     V+PV   S  D     +  S   +C      ++LSH + H L A    
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105

Query: 218  DRGEHGARSIISCETGLAHT 159
               +HG R  +SCET L  T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125


>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
          Length = 330

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = -2

Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
           EG +P +     V+PV   S  D     +  S   +C      ++LSH + H L A    
Sbjct: 71  EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129

Query: 218 DRGEHGARSIISCETGLAHT 159
              +HG R  +SCET L  T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149


>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 181

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -2

Query: 293 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 159
           +C      V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 94  ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137


>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 497

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = +2

Query: 449 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRXIRT 628
           P G  +   PDH   +  ++H    P   L +  R+   +  G+ +R  PH        T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247

Query: 629 PPRHPASGLSR 661
            P HP  GLS+
Sbjct: 248 APDHP-HGLSK 257



 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/75 (28%), Positives = 28/75 (37%)
 Frame = +2

Query: 437 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 616
           G     G  +   PDH   +      R  P   L V  R+   +  GL +R  PH     
Sbjct: 320 GPDHTHGVSKRTAPDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGL 375

Query: 617 XIRTPPRHPASGLSR 661
              T P HP  G+S+
Sbjct: 376 SKSTAPDHP-HGVSK 389


>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2735

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = +2

Query: 443 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRXI 622
           PQ  G   EDD D+V+    ++  +RH +   +V+  S    RA   RR    R  +R  
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706

Query: 623 RTPPRHPASGLSRSR 667
           +T  + P+   +R++
Sbjct: 707 QTHSQ-PSQATARTQ 720


>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
          Length = 367

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +2

Query: 479 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRXIR 625
           DH + I+    V RH    L  R R+ H +R  L+ +   H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322


>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
          Length = 329

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -2

Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
           V+PV   S  D     +  S   +C      ++LSH + H L A       +HG R  +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262

Query: 182 CETGLAHT 159
           CET L  T
Sbjct: 263 CETQLVLT 270


>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
          Length = 452

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -2

Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
           V+PV   S  D     +  S   +C      ++LSH + H L A       +HG R  +S
Sbjct: 2   VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60

Query: 182 CETGLAHT 159
           CET L  T
Sbjct: 61  CETQLVLT 68


>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
          Length = 764

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +2

Query: 473 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRXIRTPPRH 640
           DP HV R    +RHVRR PS +  VR ++       +RR  L  R H+R      RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277


>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
          Length = 892

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = -2

Query: 299 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 135
           FA CL   +   V+LSH + H L A       +HG R+  SCET L    H  A +  + 
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520

Query: 134 GNFFVAHLE 108
           G   V  L+
Sbjct: 521 GQVDVLLLD 529


>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 444 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 572
           + PK    ++  ++F  F  P M +A++    + A+G  TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216


>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1521

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = -3

Query: 595 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 422
           ETPSP   + P   PDA    TAW    +   L  S  + V  S    G  LRGA   + 
Sbjct: 90  ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146

Query: 421 G 419
           G
Sbjct: 147 G 147


>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
           GNT R     AKPAL++P P S T
Sbjct: 40  GNTNRRTRIQAKPALNLPSPPSKT 63


>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 635

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -3

Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
           GNT R    PAKP L IP P + T
Sbjct: 68  GNTNRRTRIPAKPTLTIPSPPTKT 91


>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2870

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 505  PPCTSPSKPCSRCTRPVVPPVSC 573
            PP   P  P    T P +PP SC
Sbjct: 973  PPLPPPPPPVQTTTAPTLPPASC 995


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,751,318
Number of Sequences: 59808
Number of extensions: 582242
Number of successful extensions: 2034
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2021
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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