Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_C08
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32062| Best HMM Match : No HMM Matches (HMM E-Value=.) 204 6e-53
SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.) 143 1e-34
SB_34638| Best HMM Match : Fork_head (HMM E-Value=0) 138 4e-33
SB_47058| Best HMM Match : Fork_head (HMM E-Value=0) 138 4e-33
SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 6e-32
SB_13048| Best HMM Match : Fork_head (HMM E-Value=0) 129 2e-30
SB_38328| Best HMM Match : No HMM Matches (HMM E-Value=.) 121 4e-28
SB_15898| Best HMM Match : Fork_head (HMM E-Value=0) 116 2e-26
SB_12905| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 7e-26
SB_3400| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 7e-26
SB_56358| Best HMM Match : Fork_head (HMM E-Value=1.2e-30) 110 8e-25
SB_53442| Best HMM Match : Fork_head (HMM E-Value=0) 108 3e-24
SB_5069| Best HMM Match : Fork_head (HMM E-Value=0) 101 7e-22
SB_5331| Best HMM Match : Fork_head (HMM E-Value=0) 100 1e-21
SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 3e-20
SB_10836| Best HMM Match : Fork_head (HMM E-Value=0) 95 4e-20
SB_15500| Best HMM Match : Fork_head (HMM E-Value=1.7e-39) 95 6e-20
SB_10139| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 9e-14
SB_14691| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29) 70 2e-12
SB_51547| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_647| Best HMM Match : Fork_head (HMM E-Value=3.5e-21) 60 1e-09
SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_5489| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_51004| Best HMM Match : Fork_head (HMM E-Value=3) 42 3e-04
SB_38984| Best HMM Match : Fork_head (HMM E-Value=3e-06) 39 0.004
SB_40026| Best HMM Match : Fork_head (HMM E-Value=4.2e-05) 38 0.005
SB_11344| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_58766| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 29 3.3
SB_2062| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_13421| Best HMM Match : Harpin (HMM E-Value=0.62) 29 4.3
SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 28 7.5
SB_55219| Best HMM Match : Lipoprotein_17 (HMM E-Value=4.5) 27 9.9
SB_49186| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_9455| Best HMM Match : Fork_head (HMM E-Value=0.021) 27 9.9
>SB_32062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 204 bits (497), Expect = 6e-53
Identities = 89/114 (78%), Positives = 104/114 (91%), Gaps = 1/114 (0%)
Frame = +3
Query: 309 QEAASPTSALQRARN-DKTYRRSYTHAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMD 485
Q+ + L+++++ +K YRRSYTHAKPPYSYISLITMAIQ +P++MLTLSEIYQFIMD
Sbjct: 12 QDPSQNPHELKKSKDKEKAYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQFIMD 71
Query: 486 LFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFEN 647
LFP+YRQNQQRWQNSIRHSLSFNDCFVKVPR+PD+PGKGS+WTLHPD GNMFEN
Sbjct: 72 LFPYYRQNQQRWQNSIRHSLSFNDCFVKVPRSPDRPGKGSYWTLHPDCGNMFEN 125
>SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 143 bits (346), Expect = 1e-34
Identities = 63/87 (72%), Positives = 71/87 (81%)
Frame = +3
Query: 387 KPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 566
KPPYSYI+LI MAIQ+ P + +TLS IY FIMD FP+YR N+Q WQNSIRH+LS N+CFV
Sbjct: 58 KPPYSYIALIAMAIQSAPEKRITLSGIYSFIMDRFPYYRNNKQGWQNSIRHNLSLNECFV 117
Query: 567 KVPRTPDKPGKGSFWTLHPDSGNMFEN 647
KVPR KPGKGSFW L PDS NMFEN
Sbjct: 118 KVPRDDKKPGKGSFWMLDPDSLNMFEN 144
>SB_34638| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 312
Score = 138 bits (334), Expect = 4e-33
Identities = 65/112 (58%), Positives = 83/112 (74%), Gaps = 6/112 (5%)
Frame = +3
Query: 324 PTSALQRA---RNDKTYRRSYT--HAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDL 488
PT + Q A N + Y KPP+SYI+LITM+I+ +P RM TL+EIY+FIM
Sbjct: 66 PTESAQEALLTMNTNPQSKPYLCDEVKPPFSYIALITMSIEASPYRMRTLNEIYEFIMTR 125
Query: 489 FPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTP-DKPGKGSFWTLHPDSGNMF 641
FP++R+NQQ+WQNSIRH+LS NDCFVKVPR+ KPGKG++WTLHP G+MF
Sbjct: 126 FPYFRKNQQKWQNSIRHNLSLNDCFVKVPRSIFGKPGKGNYWTLHPSCGDMF 177
>SB_47058| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 312
Score = 138 bits (334), Expect = 4e-33
Identities = 65/112 (58%), Positives = 83/112 (74%), Gaps = 6/112 (5%)
Frame = +3
Query: 324 PTSALQRA---RNDKTYRRSYT--HAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDL 488
PT + Q A N + Y KPP+SYI+LITM+I+ +P RM TL+EIY+FIM
Sbjct: 66 PTESAQEALLTMNTNPQSKPYLCDEVKPPFSYIALITMSIEASPYRMRTLNEIYEFIMTR 125
Query: 489 FPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTP-DKPGKGSFWTLHPDSGNMF 641
FP++R+NQQ+WQNSIRH+LS NDCFVKVPR+ KPGKG++WTLHP G+MF
Sbjct: 126 FPYFRKNQQKWQNSIRHNLSLNDCFVKVPRSIFGKPGKGNYWTLHPSCGDMF 177
>SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 392
Score = 134 bits (324), Expect = 6e-32
Identities = 59/117 (50%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
Frame = +3
Query: 300 PREQEAASPTSALQRARNDKTY-RRSYTHAKPPYSYISLITMAIQNNPSRMLTLSEIYQF 476
P + L++ DK RR + KPPYSYI+LI MAI ++P R LTLSEIY F
Sbjct: 13 PAGNPVLNSNEELEKEVGDKKQSRRQQSRGKPPYSYIALICMAITSSPQRQLTLSEIYDF 72
Query: 477 IMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFEN 647
I FPFY+ +W+NSIRH+L+ NDCF+K+PR P++PGKG++WT+ P S +MF+N
Sbjct: 73 ISQRFPFYQTCSIKWKNSIRHNLTLNDCFIKLPREPNRPGKGNYWTIDPTSVDMFDN 129
>SB_13048| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 311
Score = 129 bits (312), Expect = 2e-30
Identities = 57/94 (60%), Positives = 70/94 (74%)
Frame = +3
Query: 366 RRSYTHAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 545
R+ +KPPYSYI+LITMAI +P R LTLS+I +FI FP+YR+ WQNSIRH+L
Sbjct: 57 RQGTALSKPPYSYIALITMAILQSPQRKLTLSDICEFIKRRFPYYREKFPSWQNSIRHNL 116
Query: 546 SFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFEN 647
S NDCFVK+PR P PGKG++WTL P S MF+N
Sbjct: 117 SLNDCFVKMPREPGNPGKGNYWTLDPASEGMFDN 150
>SB_38328| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 121 bits (292), Expect = 4e-28
Identities = 54/114 (47%), Positives = 78/114 (68%)
Frame = +3
Query: 303 REQEAASPTSALQRARNDKTYRRSYTHAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIM 482
+E +ASPT ++ D + + KPPYSY++LI MAI+ +P + LTL+ IYQ+I+
Sbjct: 19 KEDGSASPTDCIKAEGKDTS---KDPNVKPPYSYVALIAMAIRESPEKRLTLNGIYQYII 75
Query: 483 DLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFE 644
FP+Y +N++ WQNSIRH+LS N+CF+KVPR KG++WTL P +MFE
Sbjct: 76 SKFPYYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFE 129
>SB_15898| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 460
Score = 116 bits (279), Expect = 2e-26
Identities = 59/140 (42%), Positives = 89/140 (63%), Gaps = 9/140 (6%)
Frame = +3
Query: 225 SVGYSPPSTMASCMGGAGAVPYGSL----PREQEAA--SPTSALQ-RARNDKTYRRSYT- 380
++ + P ++ + GG A+ + P+++ A +P S L A D+T R +
Sbjct: 10 AMDWLPKLSVGNAFGGPNALKSSNNNNVDPKDKSALRKAPGSPLDPSAVLDETEARQHQT 69
Query: 381 -HAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFND 557
+KPPYSY +LIT AI ++P + +TLSEIYQ+I D FP+Y++ W+NSIRH+LS N
Sbjct: 70 KESKPPYSYANLITFAINSSPEKKMTLSEIYQWICDHFPYYKEAGNGWKNSIRHNLSLNK 129
Query: 558 CFVKVPRTPDKPGKGSFWTL 617
CF+KVPR+ D PGKGS+W +
Sbjct: 130 CFIKVPRSKDDPGKGSYWAI 149
>SB_12905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 114 bits (274), Expect = 7e-26
Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 4/98 (4%)
Frame = +3
Query: 366 RRSYTHAK----PPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSI 533
+++ TH K PPYSYI+LI MA+QN+P + LTL I +FI D FPFYR+ W+ I
Sbjct: 98 KKARTHRKCRRRPPYSYIALIAMAVQNSPEKRLTLDGICKFIRDRFPFYRETYPSWKICI 157
Query: 534 RHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFEN 647
R++LS NDCF+K D+P KG++WTL P+S NMFEN
Sbjct: 158 RNNLSLNDCFIKTGIKSDEPLKGNYWTLDPESYNMFEN 195
>SB_3400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 114 bits (274), Expect = 7e-26
Identities = 54/96 (56%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Frame = +3
Query: 369 RSYTHA--KPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYR-QNQQRWQNSIRH 539
+ YT A KPPYSY++LI+MAI+ +P R +TL+ IY FI FP+Y QN++ WQNSIRH
Sbjct: 53 KPYTPAPQKPPYSYVALISMAIKQSPGRKITLNGIYHFITSAFPYYTWQNKRGWQNSIRH 112
Query: 540 SLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFEN 647
+LS N CFVKV R PGKG +WTL P MFE+
Sbjct: 113 NLSLNRCFVKVHREKADPGKGCYWTLDPAYEEMFED 148
>SB_56358| Best HMM Match : Fork_head (HMM E-Value=1.2e-30)
Length = 289
Score = 110 bits (265), Expect = 8e-25
Identities = 44/56 (78%), Positives = 48/56 (85%)
Frame = +3
Query: 480 MDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFEN 647
MD FPFYR N QRWQNS+RH+LSFNDCFVK+PR PD+PGKGS W LHPD G MFEN
Sbjct: 1 MDHFPFYRDNTQRWQNSLRHNLSFNDCFVKIPRRPDQPGKGSLWALHPDCGTMFEN 56
>SB_53442| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 407
Score = 108 bits (260), Expect = 3e-24
Identities = 56/135 (41%), Positives = 78/135 (57%)
Frame = +3
Query: 237 SPPSTMASCMGGAGAVPYGSLPREQEAASPTSALQRARNDKTYRRSYTHAKPPYSYISLI 416
+P +A+ A +V S E + + ++ + N Y+ H KPPYSY +LI
Sbjct: 50 APNQPIANSTTSAESVTSDSEQSESGDSKSSESISKEPNID-YKNDPNH-KPPYSYATLI 107
Query: 417 TMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPG 596
MA+++ +TLS IY++I + F FYR WQNSIRH+LS N CFVKVPR D+PG
Sbjct: 108 CMAMRDTKRVKITLSAIYKWIKENFMFYRVADPTWQNSIRHNLSLNKCFVKVPRKKDEPG 167
Query: 597 KGSFWTLHPDSGNMF 641
KG FW + P +MF
Sbjct: 168 KGGFWRIDPAYADMF 182
>SB_5069| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 331
Score = 101 bits (241), Expect = 7e-22
Identities = 43/87 (49%), Positives = 62/87 (71%)
Frame = +3
Query: 387 KPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 566
KP +SYI+LI MAI +N S+ + L +IYQ+I D FP+YR + W+NSIRH+LS N+CF+
Sbjct: 82 KPAHSYIALIAMAILSNSSKKMILGDIYQYISDNFPYYRNKDKSWRNSIRHNLSLNECFI 141
Query: 567 KVPRTPDKPGKGSFWTLHPDSGNMFEN 647
K R+ + GKG++W +HP + F N
Sbjct: 142 KAGRSEN--GKGNYWAIHPANLEDFAN 166
>SB_5331| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 503
Score = 100 bits (239), Expect = 1e-21
Identities = 50/105 (47%), Positives = 64/105 (60%)
Frame = +3
Query: 309 QEAASPTSALQRARNDKTYRRSYTHAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDL 488
Q A+S S++ ++ +S KPPYSY LI AI + + LTLS IY I
Sbjct: 91 QAASSAGSSVSGDKSSSEGGKS-EDGKPPYSYAQLIVQAILSATDKQLTLSGIYAHITKN 149
Query: 489 FPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHP 623
+P+YR + WQNSIRH+LS N FVKVPR D+PGKGSFW + P
Sbjct: 150 YPYYRTADKGWQNSIRHNLSLNRYFVKVPRAQDEPGKGSFWRIDP 194
>SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = +3
Query: 372 SYTHAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSF 551
+Y+H KP SYISLI+ AI ++P + L LS+IY FI+ +P++R W+NSIRH+LS
Sbjct: 75 TYSHEKPNQSYISLISEAILSSPEQKLILSDIYNFILTRYPYFRTKGTGWRNSIRHNLSL 134
Query: 552 NDCFVKVPRTPDKPGKGSFWTL 617
N+CFVK R+P+ GKG FW +
Sbjct: 135 NECFVKAGRSPN--GKGHFWAI 154
>SB_10836| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 458
Score = 95.1 bits (226), Expect = 4e-20
Identities = 41/82 (50%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +3
Query: 384 AKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 563
+KPPYS+ SLI MAI+ +P++ L + +IY +IMD FP++R + W+NS+RH+LS N CF
Sbjct: 121 SKPPYSFSSLIFMAIEESPNKRLPVKDIYNWIMDHFPYFRDARLGWKNSVRHNLSLNKCF 180
Query: 564 VKVPRTP-DKPGKGSFWTLHPD 626
KV + GKGS WT+ PD
Sbjct: 181 KKVDKDKGQNVGKGSLWTVDPD 202
>SB_15500| Best HMM Match : Fork_head (HMM E-Value=1.7e-39)
Length = 554
Score = 94.7 bits (225), Expect = 6e-20
Identities = 40/77 (51%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = +3
Query: 387 KPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 566
KPP+SYI+LI AI N+P + LTL+EI ++++ + F+R + Q W+NS+RH+LSFN CFV
Sbjct: 133 KPPHSYIALIATAILNSPEKRLTLTEINEYLVKHYVFFRGSYQGWKNSVRHNLSFNKCFV 192
Query: 567 KVPRTPDKP-GKGSFWT 614
K+ R P +P GK ++WT
Sbjct: 193 KILRDPARPWGKDNYWT 209
>SB_10139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/81 (48%), Positives = 56/81 (69%)
Frame = +3
Query: 387 KPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 566
KP SYI LI AI + P + L LS+IY +I+ +P++R W+NSIRH+LS N+CFV
Sbjct: 99 KPSQSYIGLIGKAIMSVPQKKLVLSDIYNYILTHYPYFRNKGAGWRNSIRHNLSLNECFV 158
Query: 567 KVPRTPDKPGKGSFWTLHPDS 629
KV R+ + GKG FW ++P++
Sbjct: 159 KVGRSSN--GKGHFWAINPEN 177
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 74.1 bits (174), Expect = 9e-14
Identities = 34/86 (39%), Positives = 53/86 (61%)
Frame = +3
Query: 363 YRRSYTHAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHS 542
YR + KP SY++LI+ AI + + LTLSEIY I FP++ + W+N++RH+
Sbjct: 11 YRTGKSQRKPSTSYVALISTAILESAEKRLTLSEIYDAIELKFPWFTATRMGWKNTVRHN 70
Query: 543 LSFNDCFVKVPRTPDKPGKGSFWTLH 620
LS ++CFVK + + GK +W +H
Sbjct: 71 LSLHECFVKGELSSN--GKSCYWRVH 94
>SB_14691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +3
Query: 399 SYISLITMAIQNNPSRMLTLSEIYQFIMDLFP-FYRQNQQRWQNSIRHSLSFNDCFVKVP 575
+++++I +I + P++ +TLS IY FI +P F ++ W+NS+RH+LS NDCFVK
Sbjct: 129 TFVAVIAQSILSVPTKRMTLSSIYSFIAKNYPHFDKEKGPGWRNSVRHNLSSNDCFVKAS 188
Query: 576 RTPDKPGKGSFWTLHP 623
R + GKG +W +HP
Sbjct: 189 RAEN--GKGHYWMIHP 202
>SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29)
Length = 594
Score = 69.7 bits (163), Expect = 2e-12
Identities = 27/61 (44%), Positives = 43/61 (70%)
Frame = +3
Query: 387 KPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 566
+PP++Y SLI AI ++P LTL+EIY + F ++R+N W+N++RH+LS + CFV
Sbjct: 408 RPPFTYASLIRQAILDSPDTQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFV 467
Query: 567 K 569
+
Sbjct: 468 R 468
>SB_51547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +3
Query: 450 LTLSEIYQFIMDLFP-FYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHP 623
+TLS IY FI +P F ++ W+NS+RH+LS NDCFVK R + GKG +W +HP
Sbjct: 1 MTLSCIYSFIAKTYPHFDKEKGPGWRNSVRHNLSSNDCFVKASRAEN--GKGHYWMIHP 57
>SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 62.1 bits (144), Expect = 4e-10
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Frame = +3
Query: 300 PREQEAASPTSALQRARNDKTYRRSYTHAKPPYSYISLITMAIQNNPSRMLTLSEIYQFI 479
P + S L++ ++ + S +A YSY LIT AIQ++P + LTLS+IY ++
Sbjct: 36 PEPEPTNSEQEPLKQVASEPK-KSSRKNAWGNYSYADLITQAIQSSPEKRLTLSQIYDWM 94
Query: 480 MDLFPFYR-----QNQQRWQNSIRHSLSFNDCFVKV 572
++ P++R + W+NSIRH+LS + FV+V
Sbjct: 95 VNSVPYFRDKGDSNSSAGWKNSIRHNLSLHSKFVRV 130
>SB_647| Best HMM Match : Fork_head (HMM E-Value=3.5e-21)
Length = 491
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/82 (35%), Positives = 47/82 (57%)
Frame = +3
Query: 381 HAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDC 560
+ +PPYSY +LI +AI + + +TL EIY++I + FP+Y + ++ W
Sbjct: 58 YTRPPYSYATLILLAINSTEEKRMTLQEIYKWIEERFPYYTKCKKAW------------- 104
Query: 561 FVKVPRTPDKPGKGSFWTLHPD 626
K R D PGKGS+W++ P+
Sbjct: 105 --KEKRPADLPGKGSYWSISPE 124
>SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Frame = +3
Query: 399 SYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQ-----QRWQNSIRHSLSFNDCF 563
SY LI AI + + LTL +IY + + P+++ + + W+N+IRH+LS F
Sbjct: 750 SYSDLIARAIDQSKFQKLTLPQIYDWFVINVPYFKAKEHLPSTKGWKNAIRHTLSLRQRF 809
Query: 564 VKVPRTPDKPGKGSFWTLHPD 626
V++P P P + S+WT+ D
Sbjct: 810 VRLP-DPGNPYR-SWWTVASD 828
>SB_5489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +3
Query: 381 HAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQ--QRWQNSIRHSLSFN 554
++K SY L+ AI ++P + LTL EIY + D + W+N+IRH+LS
Sbjct: 445 YSKGTVSYSDLLAEAISSSPDKRLTLQEIYMWFEDNVAGISPSSVTHDWKNTIRHTLSRR 504
Query: 555 DCFVKVPRTPDKPGKGSFWTLHP 623
F+++ + +K K S+WT++P
Sbjct: 505 KRFLRIAMS-EKKNK-SWWTVNP 525
>SB_51004| Best HMM Match : Fork_head (HMM E-Value=3)
Length = 136
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 4/38 (10%)
Frame = +3
Query: 366 RRSYTHAK----PPYSYISLITMAIQNNPSRMLTLSEI 467
+++ TH K PPYSYI+LI MA+QN+P + LTL I
Sbjct: 98 KKARTHRKCRRRPPYSYIALIAMAVQNSPEKRLTLDGI 135
>SB_38984| Best HMM Match : Fork_head (HMM E-Value=3e-06)
Length = 246
Score = 38.7 bits (86), Expect = 0.004
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Frame = +3
Query: 354 DKTYRRSYTHAKPPY---SYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQ---- 512
D TY K P+ SY LI AI + + LTL +IY++ ++ ++R +
Sbjct: 118 DTTYDDQEKEKKKPWGNASYSDLIARAITQSTKQKLTLPQIYEWFVENVSYFRDREHLPS 177
Query: 513 -QRW----------QNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTL 617
+ W QN+IRH+LS FV+ P P + S+W+L
Sbjct: 178 TKGWKLIRIPCAIIQNAIRHTLSLRQRFVRTV-DPTNPYR-SWWSL 221
>SB_40026| Best HMM Match : Fork_head (HMM E-Value=4.2e-05)
Length = 156
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 387 KPPYSYISLITMAIQNNPSRMLTLSEIYQFIM 482
KP +SY +LI MAI+ + + LTLS IY++IM
Sbjct: 61 KPAFSYNALIMMAIRGSEEKRLTLSGIYEYIM 92
>SB_11344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +3
Query: 381 HAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIM 482
+ KP +SY LI MA++N+ S L +SEIY+F++
Sbjct: 168 YPKPLFSYSCLIAMALKNSDSGTLPVSEIYKFMI 201
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 525 NSIRHSLSFNDCFVKVPRTPD-KPGKGSFWTLHPD 626
NS+RH+LS N F K+ R KG W+L P+
Sbjct: 299 NSVRHNLSLNKAFCKLERPQGASQRKGCLWSLKPE 333
>SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 165 PYPNLYSNNMVAGGSCMGSPSVGYSPPSTMASCMGGAGAVPYGSLPREQEAASPTSALQR 344
PYP+ NN +GG G VG P + G +P S R Q +P +A+
Sbjct: 446 PYPSAEYNNYYSGGDPYGQGRVG---PKMDGNKHQGPSPLPQASADRGQ--TTPVNAVHP 500
Query: 345 ARNDKTY-RRSYTHAKPPYSYISLITMAIQN 434
A ++ T +Y A+P Y S + N
Sbjct: 501 AGSNPTSGSGNYFPAQPGYPATSTMPSGAPN 531
>SB_58766| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 525 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHP 623
N++RH+LS FV+V T G S+WT+ P
Sbjct: 1 NTVRHTLSMRKRFVRVAMT--SKGNKSWWTVKP 31
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 264 MGGAGAVPYGSLPREQEAASPTSALQRARND 356
+ GAGAV G PR+Q +SP + ++ D
Sbjct: 2 LAGAGAVYTGPSPRKQPTSSPAATIEAPEQD 32
>SB_2062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1136
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 165 PYPNLYSNNMVAGGSCMGSPSVGYSPPSTMASCMGGAG 278
P PNLY + A C + +P S +SC G G
Sbjct: 990 PCPNLYEHRPCARQRCSSTKKCEVTPWSAWSSCRGSCG 1027
>SB_13421| Best HMM Match : Harpin (HMM E-Value=0.62)
Length = 375
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 252 MASCMGGAGAVPYGSLPREQEAASPTSALQRAR 350
++S MG V +GS+P+ AASP+ Q R
Sbjct: 195 LSSLMGSISQVSWGSIPKSHGAASPSLMGQHLR 227
>SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 493
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 216 GSPSVGYSPPSTMASCMGGAGAVPYGSLPREQEAASPTSALQRARNDKTYRRSYTH 383
G+P+ S S+++ G + GSL R + +P S++ R R+D +R H
Sbjct: 296 GTPAASRSSSSSISLASPGMRS-SLGSLQRTPPSFTPRSSISRRRSDTPTKRRRMH 350
>SB_55219| Best HMM Match : Lipoprotein_17 (HMM E-Value=4.5)
Length = 210
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 399 SYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFY 500
SY +I+ AI + PS+ TL IY++I++ ++
Sbjct: 164 SYSEMISKAIMSCPSQEATLHTIYEWIVNNVSYF 197
>SB_49186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1776
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 168 YPNLYSNNMVAGGSCMGSPSVGYSPPST 251
Y +++ + ++GGS M +PS+ PPST
Sbjct: 840 YSSMFWSAHMSGGSTMATPSLTSLPPST 867
>SB_9455| Best HMM Match : Fork_head (HMM E-Value=0.021)
Length = 266
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 399 SYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFY 500
SY +I+ AI + PS+ TL IY++I++ ++
Sbjct: 164 SYSEMISKAIMSCPSQEATLHTIYEWIVNNVSYF 197
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,731,029
Number of Sequences: 59808
Number of extensions: 357478
Number of successful extensions: 1103
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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