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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_B04
         (652 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.005
SB_24633| Best HMM Match : Transposase_8 (HMM E-Value=0.076)           36   0.038
SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.15 
SB_242| Best HMM Match : AFP (HMM E-Value=0.45)                        33   0.20 
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.35 
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)                     31   1.1  
SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2)                   31   1.1  
SB_54400| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.3  

>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 195

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 25/83 (30%), Positives = 39/83 (46%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
           S T     TS T + S     S+T+   T+S  C     C  +YT +TSY +  S+ + T
Sbjct: 109 SYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTCTTSYTCTTSYTSTTSYTSTT 168

Query: 419 STCSSIGTAVNRTYRFISTEMFT 487
           S  S+  T+   T  + +T  +T
Sbjct: 169 SYTST--TSYTSTTSYTTTTSYT 189



 Score = 35.1 bits (77), Expect = 0.050
 Identities = 25/83 (30%), Positives = 37/83 (44%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
           S T     TS T + S     S+T+   T+S        C  +YT +TSY    S+ + T
Sbjct: 103 SYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTCTTSYTCTTSYTSTT 162

Query: 419 STCSSIGTAVNRTYRFISTEMFT 487
           S  S+  T+   T  + ST  +T
Sbjct: 163 SYTST--TSYTSTTSYTSTTSYT 183



 Score = 31.9 bits (69), Expect = 0.47
 Identities = 23/84 (27%), Positives = 39/84 (46%)
 Frame = +2

Query: 236 PSQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAY 415
           PS T     T+ T + S     ++T+   T+S           +YT++TSY +  S+ + 
Sbjct: 60  PSYTPTTSYTTTTSYTSTTSYTTTTSYTPTTSYTSTTSYTSTTSYTSTTSYTSTTSYTST 119

Query: 416 TSTCSSIGTAVNRTYRFISTEMFT 487
           TS  S+  T+   T  + ST  +T
Sbjct: 120 TSYTST--TSYTSTTSYTSTTSYT 141



 Score = 31.1 bits (67), Expect = 0.81
 Identities = 19/74 (25%), Positives = 32/74 (43%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
           S T     TS T + S      +T+   T+S  C        +YT++TSY +  S+ + T
Sbjct: 121 SYTSTTSYTSTTSYTSTTSYTCTTSYTCTTSYTCTTSYTSTTSYTSTTSYTSTTSYTSTT 180

Query: 419 STCSSIGTAVNRTY 460
           S  ++       +Y
Sbjct: 181 SYTTTTSYTTTTSY 194



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
           S T     TS T + S     S+T+   T+S           +YT++TSY +  S+   T
Sbjct: 85  SYTPTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTT 144

Query: 419 S-TCSSIGTAVNRTYRFISTEMFT 487
           S TC+   T+   T  + ST  +T
Sbjct: 145 SYTCT---TSYTCTTSYTSTTSYT 165



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 24/83 (28%), Positives = 35/83 (42%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
           S T     TS T + S     S+T+   T+S           +YT +TSY    S+   T
Sbjct: 97  SYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTCTTSYTCTT 156

Query: 419 STCSSIGTAVNRTYRFISTEMFT 487
           S  S+  T+   T  + ST  +T
Sbjct: 157 SYTST--TSYTSTTSYTSTTSYT 177


>SB_24633| Best HMM Match : Transposase_8 (HMM E-Value=0.076)
          Length = 255

 Score = 35.5 bits (78), Expect = 0.038
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = +3

Query: 132 RRIFPPQFKLQVLEAYRRDSQCRGNQRATARKFGIHRRQIQKWLQAE 272
           R+ +  + KL+V+E Y+ +     N+  T R+FGI R+ I +WL+ E
Sbjct: 75  RKSYSREMKLEVIEWYKNNGL---NKNKTCRQFGIPRKCITQWLKME 118


>SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 153

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +2

Query: 236 PSQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFI-- 409
           PS T     TS T + S     S+T+   T+S  C        +YT++TSY    S+   
Sbjct: 66  PSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTSTTSYTSTTSYTPTTSYTPT 125

Query: 410 -AYTSTCS 430
            +YTST S
Sbjct: 126 PSYTSTPS 133



 Score = 31.9 bits (69), Expect = 0.47
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
           S T     TS T + S     S+T+   T S           +YT++TSY +  S+ + T
Sbjct: 37  SYTSTSSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTT 96

Query: 419 S-TCSSIGTAVNRTYRFISTEMFT 487
           S TC+   T+   T  + ST  +T
Sbjct: 97  SYTCT---TSYTSTTSYTSTTSYT 117



 Score = 31.5 bits (68), Expect = 0.62
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFI--- 409
           S T     TS T + S     S+T+   T+S           +YT++TSY +  S+    
Sbjct: 7   SYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTSSYTSTTSYTSTTSYTSTTSYTSTP 66

Query: 410 AYTSTCS-SIGTAVNRTYRFISTEMFT 487
           +YTST S +  T+   T  + ST  +T
Sbjct: 67  SYTSTTSYTSTTSYTSTTSYTSTTSYT 93



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
           S T     TS T + S     S+T+   T+S        C  +YT++TSY +  S+   T
Sbjct: 61  SYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTSTTSYTSTTSYTPTT 120

Query: 419 S 421
           S
Sbjct: 121 S 121



 Score = 30.3 bits (65), Expect = 1.4
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSF---I 409
           S T     TS T + S     S+T+   T+S           +YT++TSY    S+    
Sbjct: 49  SYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTSTT 108

Query: 410 AYTSTCS-SIGTAVNRTYRFISTEMFTXN 493
           +YTST S +  T+   T  + ST  +T +
Sbjct: 109 SYTSTTSYTPTTSYTPTPSYTSTPSYTSS 137


>SB_242| Best HMM Match : AFP (HMM E-Value=0.45)
          Length = 147

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 24/83 (28%), Positives = 37/83 (44%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
           S T     T  T + S     S+T+   T+S        C  +YT++TSY +  S+ + T
Sbjct: 13  SYTSTTSYTCTTSYTSTTSYTSTTSYTSTTSYTPTTSYTCTTSYTSTTSYTSTTSYTSTT 72

Query: 419 STCSSIGTAVNRTYRFISTEMFT 487
           S  S+       +YR  ST  +T
Sbjct: 73  SYTSTTSYTSTTSYR--STPSYT 93



 Score = 31.5 bits (68), Expect = 0.62
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
           S T     TS T + S     S+ +   T S  C     C  +YT++TSY    S+   T
Sbjct: 67  SYTSTTSYTSTTSYTSTTSYRSTPSYTPTPSYTCTTSYTCTTSYTSTTSYTCTTSYTCTT 126

Query: 419 S 421
           S
Sbjct: 127 S 127



 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +2

Query: 305 STAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYTS-TCSSIGTAVNRTYRFISTEM 481
           +T+   T+S  C        +YT++TSY +  S+   TS TC+   T+   T  + ST  
Sbjct: 11  TTSYTSTTSYTCTTSYTSTTSYTSTTSYTSTTSYTPTTSYTCT---TSYTSTTSYTSTTS 67

Query: 482 FT 487
           +T
Sbjct: 68  YT 69



 Score = 29.5 bits (63), Expect = 2.5
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
           S T     TS T + S     S+T+   T S        C  +YT +TSY +  S+   T
Sbjct: 61  SYTSTTSYTSTTSYTSTTSYTSTTSYRSTPSYTPTPSYTCTTSYTCTTSYTSTTSYTCTT 120

Query: 419 S-TCSS 433
           S TC++
Sbjct: 121 SYTCTT 126



 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 356 CKITYTTSTSYDANVSFIAYTSTCSSIGTAVNRTYRFISTEMFT 487
           C  +YT +TSY +  S+   TS  S+  T+   T  + ST  +T
Sbjct: 4   CTPSYTCTTSYTSTTSYTCTTSYTST--TSYTSTTSYTSTTSYT 45


>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 195

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +2

Query: 263 TS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYTS-TCSS 433
           TS T +        +T+  +T+S  C     C  +YT +TSY    S+   TS TC++
Sbjct: 135 TSTTSYTPTTSYTPTTSYTLTTSYTCTTSYTCTTSYTHTTSYTCTTSYTCTTSYTCTT 192



 Score = 29.5 bits (63), Expect = 2.5
 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
 Frame = +2

Query: 236 PSQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAY 415
           PS T     T  T + S      +T+   T+S  C        +YT +TSY    S+   
Sbjct: 96  PSYTPTPSYTCTTSYTSTTSYTPTTSYTPTTSYTCTTSYTSTTSYTPTTSYTPTTSYTLT 155

Query: 416 TS-TCS---SIGTAVNRTYRFISTEMFT 487
           TS TC+   +  T+   T  +  T  +T
Sbjct: 156 TSYTCTTSYTCTTSYTHTTSYTCTTSYT 183


>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
          Length = 231

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 23/84 (27%), Positives = 38/84 (45%)
 Frame = +2

Query: 236 PSQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAY 415
           PS T     TS T + S     S+ +   T+S           +YT++TSY +  S+ + 
Sbjct: 144 PSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTST 203

Query: 416 TSTCSSIGTAVNRTYRFISTEMFT 487
           TS  S+  T+   T  + +T  +T
Sbjct: 204 TSYTST--TSYTPTPSYTATTSYT 225



 Score = 29.1 bits (62), Expect = 3.3
 Identities = 23/83 (27%), Positives = 36/83 (43%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
           S T     TS T + S     S+T+   T S           +YT++TSY +  S+ + T
Sbjct: 139 SYTPTPSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTT 198

Query: 419 STCSSIGTAVNRTYRFISTEMFT 487
           S  S+  T+   T  +  T  +T
Sbjct: 199 SYTST--TSYTSTTSYTPTPSYT 219



 Score = 27.9 bits (59), Expect = 7.6
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
           S T     TS T + S     S+T+   T+S           +YT++TSY    S+ A T
Sbjct: 163 SYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTPTPSYTATT 222

Query: 419 STCSS 433
           S  S+
Sbjct: 223 SYTST 227


>SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2)
          Length = 267

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 26/86 (30%), Positives = 35/86 (40%)
 Frame = +2

Query: 236 PSQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAY 415
           PS T     TS T + S      + +   T S        C  +YT++TSY    S   Y
Sbjct: 165 PSYTSTTSYTSTTSYTSTTSYTPTPSYTSTPSYTSTTSYTCTTSYTSTTSYTCTTS---Y 221

Query: 416 TSTCSSIGTAVNRTYRFISTEMFTXN 493
           TST     T+   T  + ST  +T N
Sbjct: 222 TST-----TSYTPTTSYTSTTSYTSN 242



 Score = 28.7 bits (61), Expect = 4.3
 Identities = 20/74 (27%), Positives = 30/74 (40%)
 Frame = +2

Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
           S T     TS T +       S+ +   T+S  C        +YT +TSY +  S+   T
Sbjct: 172 SYTSTTSYTSTTSYTPTPSYTSTPSYTSTTSYTCTTSYTSTTSYTCTTSYTSTTSYTPTT 231

Query: 419 STCSSIGTAVNRTY 460
           S  S+     N +Y
Sbjct: 232 SYTSTTSYTSNPSY 245



 Score = 28.3 bits (60), Expect = 5.7
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = +2

Query: 236 PSQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFI-- 409
           PS T     TS T +       S+T+   T+S           +YT++TSY +N S+   
Sbjct: 189 PSYTSTPSYTSTTSYTCTTSYTSTTSYTCTTSYTSTTSYTPTTSYTSTTSYTSNPSYTPT 248

Query: 410 -AYTSTCS 430
            +YT T S
Sbjct: 249 PSYTPTTS 256


>SB_54400| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 723

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +2

Query: 299 ESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYTSTCSSIGTAVNRTYRFISTE 478
           +S+ AG        W+ +KC   Y T+ SY+A  +    T  CSS       T  F+S+ 
Sbjct: 26  KSNQAGIECEQCLLWYHKKC--IYQTTKSYEALQNNSKLTWICSSCLFPNFSTTHFMSSL 83

Query: 479 MFT 487
            FT
Sbjct: 84  DFT 86


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,883,089
Number of Sequences: 59808
Number of extensions: 293051
Number of successful extensions: 982
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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