Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_A24
(928 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_8229| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_50607| Best HMM Match : Vicilin_N (HMM E-Value=0.88) 31 1.7
SB_12321| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_25237| Best HMM Match : Phage_integrase (HMM E-Value=0.2) 31 1.7
SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11) 30 3.1
SB_34282| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_48579| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_21593| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_45487| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_25942| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_6270| Best HMM Match : Vicilin_N (HMM E-Value=0.11) 29 7.1
SB_4357| Best HMM Match : Vicilin_N (HMM E-Value=0.11) 29 7.1
SB_50029| Best HMM Match : TP2 (HMM E-Value=0.15) 29 7.1
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 29 7.1
SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5) 29 7.1
SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +1
Query: 289 KRKGKYEHXRTEQEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEK 459
+RK + + E+E EE ++ + ET + D + ++E E + ++K+EE+
Sbjct: 58 RRKKEKKKKEEEEEEEEEETEAVNEEEEKIEETEKEKDEEEENEEEEEEEEDKVEER 114
>SB_8229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = +1
Query: 298 GKYEHXRTEQEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDS 438
GK+ + ++ + ++ D D NDN ++ +D+ IH++ +ND+
Sbjct: 50 GKFRNNDSDNDNDNDNDNDNDNDNDNDNDNDNDNDI-DIHNDNDNDN 95
>SB_50607| Best HMM Match : Vicilin_N (HMM E-Value=0.88)
Length = 385
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 334 SSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKVLEIIDG 480
+ +ED ID+T D +E + +++ DEG ND +K+ + L+ I G
Sbjct: 323 NDDEDNDIDVT-DEENELTMKAETLMKDDEGRNDDTDKILDAFLQWIQG 370
>SB_12321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/57 (22%), Positives = 33/57 (57%)
Frame = +1
Query: 298 GKYEHXRTEQEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKVLE 468
G +E + EY EE+ +D+ + ++S QS+ + + ++ E++ + K ++ V++
Sbjct: 40 GGFEEEEDDLEYEKEEEEDVDIVDSDFS----QSETEEVIEQDEDEPKRKKKKTVVK 92
>SB_25237| Best HMM Match : Phage_integrase (HMM E-Value=0.2)
Length = 845
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 334 SSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKVLEIIDG 480
+ +ED ID+T D +E + +++ DEG ND +K+ + L+ I G
Sbjct: 329 NDDEDNDIDVT-DEENELTMKAETLMKDDEGRNDDTDKILDAFLQWIQG 376
>SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11)
Length = 834
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 334 SSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKVLEIIDG 480
+ +ED ID+T D +E + +++ DEG ND +K+ + L+ + G
Sbjct: 329 NDDEDNDIDVT-DEENELTMKAETLMKDDEGRNDDTDKILDAFLQWLQG 376
>SB_34282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +1
Query: 289 KRKGKYEHXRTEQEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEE 456
KR G + QE S EE+AG + T+D + KS+ ++G +S+++ +E
Sbjct: 34 KRTGPKQSDAENQELS-EENAGDEKTSDLDENEEDEEGNKSLDEDGLTESKDENQE 88
>SB_48579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 334 SSEEDAGIDMTNDNYSETSGQSDLKSIHDEGEND 435
+++ED D+ +D Y++ G SD++ HD+ +D
Sbjct: 162 NNDEDGDSDVRHDEYNDEDGDSDVR--HDDNNDD 193
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 334 SSEEDAGIDMTNDNYSETSGQSDLKSIHDEGEND 435
+++ED D+ +D Y++ G SD++ HD+ +D
Sbjct: 260 NNDEDGDSDVRHDEYNDEDGDSDVR--HDDNNDD 291
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 334 SSEEDAGIDMTNDNYSETSGQSDLKSIHDEGEND 435
+++ED D+ +D+Y++ G SD++ HD+ ++
Sbjct: 120 NNDEDGDSDVRHDDYNDEDGDSDVR--HDDNNDE 151
>SB_21593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 286 GKRKGKYEHXRT---EQEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKL 450
G G YE E E EED D N++Y E S Q + I ++ D E++
Sbjct: 107 GDDDGDYEEDNDGDDENEDDYEEDNDGDDENNDYEEDSNQDQMMLIMNDDNKDHDERV 164
>SB_45487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1236
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -2
Query: 279 HGDLR*LNSLKAKHNLTKFSKYFLGFSLNQEGEKFIISVLKE*FGPRMKHKTEISXK 109
H DL+ L AKH+ + +K F G++ N G ++E F P KHK E K
Sbjct: 1062 HFDLK-KKLLGAKHDKPRSTKCF-GYTNNILGPLVGALFIREAFSPESKHKVETMMK 1116
>SB_25942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1062
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 334 SSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKVLEIIDG 480
+ +ED ID+T D E +++ DEG ND +K+ + L+ + G
Sbjct: 219 NDDEDNDIDVT-DEEDELMMKAETLMKDDEGRNDDTDKILDAFLQWLQG 266
>SB_6270| Best HMM Match : Vicilin_N (HMM E-Value=0.11)
Length = 535
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 334 SSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKVLEIIDG 480
+ +ED ID+T D E +++ DEG ND +K+ + L+ + G
Sbjct: 406 NDDEDNDIDVT-DEEDELMMKAETLMKDDEGRNDDTDKILDAFLQWLQG 453
>SB_4357| Best HMM Match : Vicilin_N (HMM E-Value=0.11)
Length = 406
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 334 SSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKVLEIIDG 480
+ +ED ID+T D E +++ DEG ND +K+ + L+ + G
Sbjct: 308 NDDEDNDIDVT-DEEDELMMKAETLMKDDEGRNDDTDKILDAFLQWLQG 355
>SB_50029| Best HMM Match : TP2 (HMM E-Value=0.15)
Length = 303
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 334 SSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEKVLEIIDG 480
+ +ED ID+T D E +++ DEG ND +K+ + L+ + G
Sbjct: 205 NDDEDNDIDVT-DEEDELMMKAETLMKDDEGRNDDTDKILDAFLQWLQG 252
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 283 KGKRKGKYEHXRTEQEYSSEEDAGIDMTNDNY-SETSGQSDLKSIHDEGENDSQEKLEEK 459
KGK+ + +E + S EED DN +T + + S D+ ++ +EK ++K
Sbjct: 169 KGKKTQAKQESSSEDDSSDEEDEKPKKKADNKGKKTQAKQESSSEEDDSSDEEEEKPKKK 228
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Frame = +1
Query: 280 PKGKRKGKYEHXRTEQEYSSEEDAGID--------MTNDNYSETSGQSDLKSIHDEGEND 435
PK K K + + +QE SSEED D +D +T + + S D+ N+
Sbjct: 193 PKKKADNKGKKTQAKQESSSEEDDSSDEEEEKPKKKADDKVKKTPAKQESSS-EDDSSNE 251
Query: 436 SQEKLEEK 459
+EK ++K
Sbjct: 252 EEEKPKKK 259
>SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5)
Length = 205
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +1
Query: 283 KGKRKGKYEHXRTEQEYSSEEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQEKLEEK 459
+ KR+ + + E+E + EE+ + + E Q++ + E E + +EK E K
Sbjct: 61 RNKRRRRKNNTEEEEEQTEEEEEQTEEEEEQTEEEEEQTEEEEEQTEEEEEEEEKEEGK 119
>SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1879
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -1
Query: 493 HE-RSARR*SPTLSLPTSLDCRFRLHHGCS*GQTVQMSP 380
HE + R+ +P+ S+PT+LD + RL+H G T+ + P
Sbjct: 1823 HEPMTMRQSNPSNSVPTTLDNKDRLNHSRLHGHTLPLVP 1861
>SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 274 TMPKGKRKGKYEHXRTEQEYSSEED---AGIDMTNDNYSETSGQSDLKSIHDEGENDSQE 444
T+ +GK K + + T+ E ++D A D NDN ET D + ++D +E
Sbjct: 287 TVEEGKWKVERDDPPTDDEGDDDDDSDRADDDNKNDNNDETERMGDNEEDAAADDDDDEE 346
Query: 445 K 447
K
Sbjct: 347 K 347
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,364,749
Number of Sequences: 59808
Number of extensions: 221086
Number of successful extensions: 1006
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2693287426
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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