Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0001
(818 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 183 2e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 183 2e-46
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 2e-29
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 4e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 94 1e-19
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 85 9e-17
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 76 3e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 67 2e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 6e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 4e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 39 0.004
SB_18355| Best HMM Match : Extensin_2 (HMM E-Value=0.55) 33 0.21
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 33 0.21
SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22) 33 0.28
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 33 0.28
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.85
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 31 1.1
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 1.5
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.6
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 29 6.0
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 29 6.0
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 183 bits (445), Expect = 2e-46
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 434 QIMFETFNTPAMYVAIQAVLSLYAS 508
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 128 bits (309), Expect = 5e-30
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 86.6 bits (205), Expect = 2e-17
Identities = 45/74 (60%), Positives = 49/74 (66%)
Frame = +1
Query: 511 RTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLGXXXXXXXXXXXXLNERXYSFTTTPS 690
RTTGIV+DSGDGV+HTVPIY GYALPHAI+RLDL L ER YSFTTT
Sbjct: 148 RTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLA-GRDLTDYLMKILTERGYSFTTTAE 206
Query: 691 GKSFVDIXEXLXYV 732
+ DI E L YV
Sbjct: 207 REIVRDIKEKLCYV 220
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 183 bits (445), Expect = 2e-46
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 434 QIMFETFNTPAMYVAIQAVLSLYAS 508
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYAS 145
Score = 125 bits (302), Expect = 4e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +3
Query: 78 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 87.4 bits (207), Expect = 1e-17
Identities = 46/74 (62%), Positives = 49/74 (66%)
Frame = +1
Query: 511 RTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLGXXXXXXXXXXXXLNERXYSFTTTPS 690
RTTGIV+DSGDGV+HTVPIY GYALPHAILRLDL L ER YSFTTT
Sbjct: 147 RTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYSFTTTAE 205
Query: 691 GKSFVDIXEXLXYV 732
+ DI E L YV
Sbjct: 206 REIVRDIKEKLAYV 219
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 183 bits (445), Expect = 2e-46
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 434 QIMFETFNTPAMYVAIQAVLSLYAS 508
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYAS 145
Score = 126 bits (305), Expect = 2e-29
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +3
Query: 78 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 87.4 bits (207), Expect = 1e-17
Identities = 46/74 (62%), Positives = 49/74 (66%)
Frame = +1
Query: 511 RTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLGXXXXXXXXXXXXLNERXYSFTTTPS 690
RTTGIV+DSGDGV+HTVPIY GYALPHAILRLDL L ER YSFTTT
Sbjct: 147 RTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYSFTTTAE 205
Query: 691 GKSFVDIXEXLXYV 732
+ DI E L YV
Sbjct: 206 REIVRDIKEKLCYV 219
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 183 bits (445), Expect = 2e-46
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 434 QIMFETFNTPAMYVAIQAVLSLYAS 508
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 132 bits (320), Expect = 2e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 87.4 bits (207), Expect = 1e-17
Identities = 46/74 (62%), Positives = 49/74 (66%)
Frame = +1
Query: 511 RTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLGXXXXXXXXXXXXLNERXYSFTTTPS 690
RTTGIV+DSGDGV+HTVPIY GYALPHAILRLDL L ER YSFTTT
Sbjct: 148 RTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYSFTTTAE 206
Query: 691 GKSFVDIXEXLXYV 732
+ DI E L YV
Sbjct: 207 REIVRDIKEKLCYV 220
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 183 bits (445), Expect = 2e-46
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 434 QIMFETFNTPAMYVAIQAVLSLYAS 508
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 128 bits (309), Expect = 5e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 45.2 bits (102), Expect(2) = 2e-07
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +1
Query: 511 RTTGIVLDSGDGVSHTVPIY 570
RTTGIV+DSGDGVSHTVPIY
Sbjct: 148 RTTGIVMDSGDGVSHTVPIY 167
Score = 28.3 bits (60), Expect(2) = 2e-07
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +1
Query: 658 ERXYSFTTTPSGKSFVDIXEXLXYV 732
ER YSFTTT + DI E L YV
Sbjct: 169 ERGYSFTTTAEREIVRDIKEKLCYV 193
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 126 bits (305), Expect = 2e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +3
Query: 78 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 86.6 bits (205), Expect = 2e-17
Identities = 45/74 (60%), Positives = 49/74 (66%)
Frame = +1
Query: 511 RTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLGXXXXXXXXXXXXLNERXYSFTTTPS 690
RTTGIV+DSGDGV+HTVPIY GYALPHAI+RLDL L ER YSFTTT
Sbjct: 110 RTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLA-GRDLTDYLMKILTERGYSFTTTAE 168
Query: 691 GKSFVDIXEXLXYV 732
+ DI E L YV
Sbjct: 169 REIVRDIKEKLCYV 182
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTF 343
+RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +2
Query: 416 NREKMTQIMFETFNTPAMYVAIQAVLSLYAS 508
N + M +IMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYAS 108
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 99.1 bits (236), Expect = 4e-21
Identities = 43/87 (49%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Frame = +2
Query: 248 TEQRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 424
++ R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NRE
Sbjct: 62 SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121
Query: 425 KMTQIMFETFNTPAMYVAIQAVLSLYA 505
KM ++MFE + +Y+AIQAVL+LYA
Sbjct: 122 KMIEVMFENYQFEGVYIAIQAVLTLYA 148
Score = 58.0 bits (134), Expect = 9e-09
Identities = 30/73 (41%), Positives = 40/73 (54%)
Frame = +1
Query: 517 TGIVLDSGDGVSHTVPIYXGYALPHAILRLDLGXXXXXXXXXXXXLNERXYSFTTTPSGK 696
TG+V+DSGDGV+H P+Y G+ALPH RLD+ L R Y+F T +
Sbjct: 153 TGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLML-LRGYAFNHTADFE 211
Query: 697 SFVDIXEXLXYVG 735
+ + E L YVG
Sbjct: 212 TVRMMKEKLCYVG 224
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +3
Query: 90 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 248
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 94.3 bits (224), Expect = 1e-19
Identities = 42/62 (67%), Positives = 52/62 (83%)
Frame = +2
Query: 323 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 502
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 503 AS 508
AS
Sbjct: 2189 AS 2190
Score = 68.1 bits (159), Expect = 8e-12
Identities = 35/73 (47%), Positives = 41/73 (56%)
Frame = +1
Query: 511 RTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLGXXXXXXXXXXXXLNERXYSFTTTPS 690
RTTG V D GDGVSHTVP+Y GY LPHA R+DL + ER YSF +T
Sbjct: 2192 RTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLA-GRDLTHYLQRLVTERGYSFQSTAE 2250
Query: 691 GKSFVDIXEXLXY 729
+ D+ E L Y
Sbjct: 2251 QQIIRDLKETLCY 2263
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 197
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 84.6 bits (200), Expect = 9e-17
Identities = 44/74 (59%), Positives = 47/74 (63%)
Frame = +1
Query: 511 RTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLGXXXXXXXXXXXXLNERXYSFTTTPS 690
RTTG+V DSGDGVSH VPIY GYALPHAILRLDL + ER YSFTTT
Sbjct: 26 RTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA-GRDLTDYLMKLMTERGYSFTTTAE 84
Query: 691 GKSFVDIXEXLXYV 732
+ DI E L YV
Sbjct: 85 REIVRDIKEKLCYV 98
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +2
Query: 437 IMFETFNTPAMYVAIQAVLSLYAS 508
IMFE FN+PA+YVAIQAVLSLYAS
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYAS 24
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 76.2 bits (179), Expect = 3e-14
Identities = 31/46 (67%), Positives = 41/46 (89%)
Frame = +2
Query: 371 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 508
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYAT 171
Score = 62.1 bits (144), Expect = 5e-10
Identities = 24/34 (70%), Positives = 32/34 (94%)
Frame = +1
Query: 511 RTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDL 612
RTTG+VLD+GDGVSH+VPIY G+A+PH+I+R D+
Sbjct: 173 RTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDI 206
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/76 (35%), Positives = 49/76 (64%)
Frame = +2
Query: 281 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 460
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 461 PAMYVAIQAVLSLYAS 508
PA ++ +VL+ +A+
Sbjct: 63 PAFFLCKNSVLTAFAN 78
Score = 34.7 bits (76), Expect = 0.091
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 511 RTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDL 612
R+ G+V+DSG + VP++ GY L AI+R L
Sbjct: 80 RSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPL 113
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 197
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 52.0 bits (119), Expect = 6e-07
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +3
Query: 66 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 236
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 237 GDEAQSK 257
GD A +K
Sbjct: 753 GDAAVAK 759
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +1
Query: 514 TTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLGXXXXXXXXXXXXLNERXYSFTTTPSG 693
T G+ L SG + IY G+ L H + L++G ++R ++FT++
Sbjct: 778 TLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGHNFTSSSGW 837
Query: 694 KSFVDIXEXLXYV 732
+ DI E + Y+
Sbjct: 838 QIVNDIKEKICYL 850
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 275 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 388
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 33.5 bits (73), Expect = 0.21
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 508 RRTTGIVLDSGDGVSHTVPI 567
R TG V+DSGDGV+H +P+
Sbjct: 353 RTLTGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = -1
Query: 194 MAGPSDDRGEYGARSIISCETGLAHTGAIVYYQRGNFLV 78
MA +DD GE G+ SI+S ETGLAHTGAI+ Q + +V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 508 RRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDL 612
R TG V+DSGDGV+H +P+ GY + I + +
Sbjct: 59 RTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPI 93
>SB_18355| Best HMM Match : Extensin_2 (HMM E-Value=0.55)
Length = 247
Score = 33.5 bits (73), Expect = 0.21
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = +3
Query: 471 TSPSKPCSRCTRPSYHRYRAGLRRRCLPHRTHLRXIRTPPRHPASGLGPVAIFTDYLMKX 650
+SPS P ++ +PS H+Y + CLP +T L PP +PA + DYL
Sbjct: 153 SSPSPP-TKPPKPSVHKYASDPELACLPQQTSL-----PPANPALVDSSDSEEDDYLKIL 206
Query: 651 PQRAXLLVHYNAEREIV 701
P H N E +
Sbjct: 207 PDEESTPNHGNNNDEFI 223
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 33.5 bits (73), Expect = 0.21
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = +3
Query: 471 TSPSKPCSRCTRPSYHRYRAGLRRRCLPHRTHLRXIRTPPRHPASGLGPVAIFTDYLMKX 650
+SPS P ++ +PS H+Y + CLP +T L PP +PA + DYL
Sbjct: 258 SSPSPP-TKPPKPSVHKYASDPELACLPQQTSL-----PPANPALVDSSDSEEDDYLKIL 311
Query: 651 PQRAXLLVHYNAEREIV 701
P H N E +
Sbjct: 312 PDEESTPNHGNNNDEFI 328
>SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22)
Length = 442
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/49 (42%), Positives = 23/49 (46%)
Frame = -3
Query: 597 DGVGECVSXVDGYGVGDTVAGVQHDTGGTTDAYSESTAWMATYMAGVLN 451
DG C DG+G GD V G D G+ D Y S W A Y G LN
Sbjct: 136 DGDDGCCYDDDGFGDGDDVDG--GDDDGSVD-YDGSYQWCADYDGGDLN 181
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/49 (42%), Positives = 23/49 (46%)
Frame = -3
Query: 597 DGVGECVSXVDGYGVGDTVAGVQHDTGGTTDAYSESTAWMATYMAGVLN 451
DG C DG+G GD V G D G+ D Y S W A Y G LN
Sbjct: 1649 DGDDGCCYDDDGFGDGDDVDG--GDDDGSVD-YDGSYQWCADYDGGDLN 1694
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 32.3 bits (70), Expect = 0.49
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 197 GRDGRYGTEGL-VRR*RGTEQRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 367
GR G + GL V G+ + L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 368 EEHPVLLTEAPLNPKANRE 424
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 169 GNTARGASSPAKPALHIPEPLSTT 98
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 169 GNTARGASSPAKPALHIPEPLSTT 98
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/80 (32%), Positives = 39/80 (48%)
Frame = -3
Query: 321 SMSSQLVTIPCSMGYLRVRIPLCSVPRHLRTSPSVPYRPSRPDGGAFRRSRGIRREEHHL 142
+++SQ VT M R +PL S P H++ SP V + P PD + R E HH
Sbjct: 792 ALTSQQVTSSHDMP--RTSMPLVSYPPHMKKSPFVVHHP--PDSAS--RHGNQAPEAHH- 844
Query: 141 LRNRPCTYRSHCLLPTRQLP 82
+ P +Y+S +R+ P
Sbjct: 845 --HEPGSYKSPHSEGSRRTP 862
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/71 (30%), Positives = 31/71 (43%)
Frame = +1
Query: 355 ACRPRGTPRPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRRTTGIVLD 534
ACR R PR P P+ + ++D D +I R P R + V +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 535 SGDGVSHTVPI 567
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 441 CSKHSTRPPCTSPSKPCSRCTRPSYHRYRAG 533
C H+ R P T+PS PC S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 169 GNTARGASSPAKPALHIPEPLSTT 98
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 397 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 489
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 30.3 bits (65), Expect = 2.0
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Frame = +3
Query: 450 HSTRPPCTS--PSKPCSRCTRPSYHRYRAGLRRRCLPHRTH-LRXIRTPPRHPASGLGPV 620
HST C + P + + + + RAG +TH LR TPP P SGL V
Sbjct: 174 HSTGKTCLALGPKEASANPREFTEEQRRAGQGHTPYASKTHPLRRQNTPPPPPKSGLPTV 233
Query: 621 --AIFTDYLMKXPQRAXLLVHYNAEREI 698
A+ Y+ + +LV ER+I
Sbjct: 234 GKALLFAYVTIQSADSVVLVEIEDERDI 261
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 281 PIEHGIVTNWDDMEKIWHHTFYNE 352
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 289 FDGVFEGQDTSLLCASSPTYESFCPIPTITP*WRGLPT 176
+DGV + + LL +SSP + S PI TP +GL T
Sbjct: 273 YDGVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 247 ASSPTYESFCPIPTITP*WRGLPTI 173
A+SP Y S P+PT TP PTI
Sbjct: 1222 ATSPPYTSASPVPTTTPSASSSPTI 1246
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 169 GNTARGASSPAKPALHIPEPLSTT 98
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 169 GNTARGASSPAKPALHIPEPLSTT 98
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,900,797
Number of Sequences: 59808
Number of extensions: 630610
Number of successful extensions: 2143
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2122
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2287608719
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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