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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0020
         (499 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2393| Best HMM Match : No HMM Matches (HMM E-Value=.)              124   4e-29
SB_32365| Best HMM Match : PALP (HMM E-Value=0.064)                   100   8e-22
SB_18116| Best HMM Match : PALP (HMM E-Value=0)                       100   8e-22
SB_44496| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   3e-07
SB_30356| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.099
SB_32670| Best HMM Match : CIMR (HMM E-Value=0)                        31   0.53 
SB_45316| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.53 
SB_13869| Best HMM Match : Antirestrict (HMM E-Value=4.5)              30   1.2  
SB_51924| Best HMM Match : PALP (HMM E-Value=3.1e-05)                  29   1.6  
SB_54464| Best HMM Match : DUF1566 (HMM E-Value=4.5)                   29   2.1  
SB_564| Best HMM Match : TrkA_N (HMM E-Value=0.05)                     29   2.8  
SB_7324| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.8  
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)                        28   3.7  
SB_50561| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.7  
SB_21002| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.7  
SB_4621| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   3.7  
SB_29397| Best HMM Match : fn3 (HMM E-Value=0.038)                     28   4.9  
SB_53121| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.9  
SB_8320| Best HMM Match : p450 (HMM E-Value=0)                         28   4.9  
SB_2273| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   4.9  
SB_45424| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.5  
SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0)                  27   6.5  
SB_24452| Best HMM Match : PKD_channel (HMM E-Value=0)                 27   6.5  
SB_6942| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.5  
SB_46672| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.5  
SB_21340| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.5  
SB_12831| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.5  
SB_51123| Best HMM Match : PDZ (HMM E-Value=3.8e-18)                   27   8.6  
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  
SB_40804| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  
SB_29646| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  
SB_27934| Best HMM Match : Complex1_30kDa (HMM E-Value=1.2)            27   8.6  
SB_23505| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  
SB_50456| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  
SB_46356| Best HMM Match : Adeno_VII (HMM E-Value=8)                   27   8.6  
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)                    27   8.6  

>SB_2393| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 384

 Score =  124 bits (299), Expect = 4e-29
 Identities = 61/81 (75%), Positives = 73/81 (90%)
 Frame = -1

Query: 253 RMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVA 74
           RM  +AE++G LKPG ++I EPTSGNTGIGLALAAAV+GYRCIIV+PEKMS+EKV+ L A
Sbjct: 49  RMIEEAEREGRLKPGDTLI-EPTSGNTGIGLALAAAVKGYRCIIVMPEKMSNEKVDVLRA 107

Query: 73  LGAEIIRTPTEAAWDSPESNI 11
           LGAEI+RTPTEA +DSPES+I
Sbjct: 108 LGAEIVRTPTEAKFDSPESHI 128



 Score = 63.7 bits (148), Expect = 8e-11
 Identities = 28/44 (63%), Positives = 35/44 (79%)
 Frame = -2

Query: 390 DILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRI 259
           +IL  IG+TPLV+++ + K  GLKCE+ AKCEF N GGSVKDRI
Sbjct: 3   NILQKIGDTPLVRINNIGKTYGLKCELLAKCEFFNAGGSVKDRI 46


>SB_32365| Best HMM Match : PALP (HMM E-Value=0.064)
          Length = 129

 Score =  100 bits (239), Expect = 8e-22
 Identities = 49/81 (60%), Positives = 61/81 (75%)
 Frame = -1

Query: 253 RMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVA 74
           RM  DAE+   +KPG ++I EPTSGNTGI LALA+AV+GYRC+IV+ EKMS +K +T  A
Sbjct: 32  RMIEDAERDNHIKPGDTLI-EPTSGNTGIALALASAVKGYRCVIVMSEKMSSDKADTQKA 90

Query: 73  LGAEIIRTPTEAAWDSPESNI 11
           LG   +R P EA +DSPES I
Sbjct: 91  LGGICVRAPAEAKFDSPESTI 111



 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -2

Query: 327 GLKCEMYAKCEFLNPGGSVKDRI 259
           GLKCE+ AKCEF+NP GS+KDRI
Sbjct: 7   GLKCEVVAKCEFMNPVGSLKDRI 29


>SB_18116| Best HMM Match : PALP (HMM E-Value=0)
          Length = 470

 Score =  100 bits (239), Expect = 8e-22
 Identities = 49/81 (60%), Positives = 61/81 (75%)
 Frame = -1

Query: 253 RMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVA 74
           RM  DAE+   +KPG ++I EPTSGNTGI LALA+AV+GYRC+IV+ EKMS +K +T  A
Sbjct: 32  RMIEDAERDNHIKPGDTLI-EPTSGNTGIALALASAVKGYRCVIVMSEKMSSDKADTQKA 90

Query: 73  LGAEIIRTPTEAAWDSPESNI 11
           LG   +R P EA +DSPES I
Sbjct: 91  LGGICVRAPAEAKFDSPESTI 111



 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -2

Query: 327 GLKCEMYAKCEFLNPGGSVKDRI 259
           GLKCE+ AKCEF+NP GS+KDRI
Sbjct: 7   GLKCEVVAKCEFMNPVGSLKDRI 29


>SB_44496| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 27

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = -1

Query: 169 IGLALAAAVRGYRCIIVLPEKMSDEK 92
           IGLALAAAV+GYRCIIV+PEKMS+EK
Sbjct: 2   IGLALAAAVKGYRCIIVMPEKMSNEK 27


>SB_30356| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 531

 Score = 33.5 bits (73), Expect = 0.099
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +3

Query: 60  ISAPNATSVFTFSSDIFSGNTIMHLYPLTAAASASPIPVLPDVGS-TMTDLPGFKI 224
           +  P A S F   +DI  G T + L    +  +  P P+LPD+ S TM ++P  ++
Sbjct: 117 LPVPPAESNFLTRADIAQGGTAVPLTQPGSTQTPEPAPILPDLPSTTMQEVPAVEV 172


>SB_32670| Best HMM Match : CIMR (HMM E-Value=0)
          Length = 1441

 Score = 31.1 bits (67), Expect = 0.53
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 481 WHIELCEKILYTKGHASHCKGTGSKSEGT 395
           +HI +C +I  T GH  HC    +   GT
Sbjct: 196 FHINICREITPTTGHTQHCPAGSAACNGT 224


>SB_45316| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 62

 Score = 31.1 bits (67), Expect = 0.53
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -2

Query: 387 ILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIASACFWMQ 235
           +  V+G  P   L+ + ++EG + E +   EFL PGGS   R A+    +Q
Sbjct: 10  LFTVVGKAPAEPLAPITEEEG-RSE-HKIIEFLQPGGSTSSRAAATAVELQ 58


>SB_13869| Best HMM Match : Antirestrict (HMM E-Value=4.5)
          Length = 149

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -2

Query: 336 KDEGLKCEMYAKCEFLNPGGSVKDRIASACFWMQ 235
           K  G K  +YA+ EFL PGGS   R A+    +Q
Sbjct: 15  KSNGGKA-IYARIEFLQPGGSTSSRAAATAVELQ 47


>SB_51924| Best HMM Match : PALP (HMM E-Value=3.1e-05)
          Length = 407

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -1

Query: 199 IVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVALGAEII 56
           +V  +SGN    L+LAA +   +  IV+P+     K   ++  GA I+
Sbjct: 173 VVTHSSGNHAQALSLAAKLMNLKAHIVMPKNAPHVKKAAVIEYGANIV 220


>SB_54464| Best HMM Match : DUF1566 (HMM E-Value=4.5)
          Length = 174

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 324 LKCEMYAKCEFLNPGGSVKDRIASACFWMQ 235
           +KC ++   EFL PGGS   R A+    +Q
Sbjct: 43  VKCLLFRFIEFLQPGGSTSSRAAATAVELQ 72


>SB_564| Best HMM Match : TrkA_N (HMM E-Value=0.05)
          Length = 226

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -1

Query: 220 LKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVL--PEKMSDEKVNTLVALG 68
           ++  K V+V   +G TG+ +   A  RG+   ++   PEKM+ +  N +V  G
Sbjct: 4   VQASKKVVVFGGTGKTGLHVVQQALDRGHHVTVIARSPEKMTIKNDNLVVVKG 56


>SB_7324| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 185

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = -2

Query: 417 LDRNQKVHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIASACFWM 238
           +D   K+ +  L  I  T LVK ++   +   K  +Y   EFL PGGS   R A+    +
Sbjct: 25  VDGIDKLDAVFLTAIWET-LVKNAETAANTS-KSSLYLGIEFLQPGGSASSRAAATAVEL 82

Query: 237 Q 235
           Q
Sbjct: 83  Q 83


>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
          Length = 646

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = -1

Query: 172 GIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVA 74
           G G  LAA +R    ++ L EK+SDE+V TL A
Sbjct: 602 GTGTVLAAELRSV--LMSLGEKLSDEEVTTLFA 632


>SB_50561| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 128

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 312 MYAKCEFLNPGGSVKDRIASACFWMQ 235
           MY   EFL PGGS   R A+    +Q
Sbjct: 1   MYVMIEFLQPGGSTSSRAAATAVELQ 26


>SB_21002| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 107

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 318 CEMYAKCEFLNPGGSVKDRIASACFWMQ 235
           CE   + EFL PGGS   R A+    +Q
Sbjct: 6   CEAAIQIEFLQPGGSTSSRAAATAVELQ 33


>SB_4621| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 175

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -2

Query: 375 IGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIASACFWMQ 235
           I N   V L KL  ++   CE+Y   EFL PGGS   R A+    +Q
Sbjct: 31  IENQKKVYLHKLLLNKKY-CELYI--EFLQPGGSTSSRAAATAVELQ 74


>SB_29397| Best HMM Match : fn3 (HMM E-Value=0.038)
          Length = 163

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -2

Query: 345 KLPKDEGLKCEM-YAKCEFLNPGGSVKDRIASACFWMQ 235
           K P ++G + ++ Y   EFL PGGS   R A+    +Q
Sbjct: 24  KPPLEDGGRSDLTYIIIEFLQPGGSTSSRAAATAVELQ 61


>SB_53121| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 188

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -2

Query: 339 PKDEGLKCEMYAKCEFLNPGGSVKDRIASACFWMQ 235
           PK     C    + EFL PGGS   R A+    +Q
Sbjct: 52  PKSTPRNCGNGQRIEFLQPGGSTSSRAAATAVELQ 86


>SB_8320| Best HMM Match : p450 (HMM E-Value=0)
          Length = 1207

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -1

Query: 244  LDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKV 89
            L  E   +LKPG+ + V   S    +   +   +R Y  I VLP +M  + +
Sbjct: 1039 LHHEVSTVLKPGEPITVNTLSSLPYLKAWIKETLRMYPIIAVLPRRMEQDLI 1090


>SB_2273| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 140

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 312 MYAKCEFLNPGGSVKDRIASACFWMQ 235
           +Y + EFL PGGS   R A+    +Q
Sbjct: 14  LYLRIEFLQPGGSTSSRAAATAVELQ 39


>SB_45424| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 324

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 312 MYAKCEFLNPGGSVKDRIASACFWMQ 235
           ++ K EFL PGGS   R A+    +Q
Sbjct: 90  VFGKIEFLQPGGSTSSRAAATAVELQ 115


>SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0)
          Length = 1498

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 69  PNATSVFTFSSDIFSGNTIMHLYPLTAAASASPIPVLPDVGSTMTDLPG 215
           PN +  FTFS  +F+   I H   L A +S   + +   VG     LPG
Sbjct: 658 PNISLKFTFSLIVFTVVLISHRGQLIAGSSGGNLRLWSVVGVAEMRLPG 706


>SB_24452| Best HMM Match : PKD_channel (HMM E-Value=0)
          Length = 1433

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -1

Query: 184 SGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVALGAEI-IRTPTEAA 35
           SGN  +   + + + GY  IIV+  K +D   N L  +G  I + TPTE A
Sbjct: 413 SGNVAVLATIVSILTGYLVIIVIVRK-ADR--NDLRKIGDPISVNTPTETA 460


>SB_6942| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 155

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 321 KCEMYAKCEFLNPGGSVKDRIASACFWMQ 235
           +C +    EFL PGGS   R A+    +Q
Sbjct: 25  QCALSVNIEFLQPGGSTSSRAAATAVELQ 53


>SB_46672| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 166

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 321 KCEMYAKCEFLNPGGSVKDRIASACFWMQ 235
           +C   A  EFL PGGS   R A+    +Q
Sbjct: 36  RCVQRAGIEFLQPGGSTSSRAAATAVELQ 64


>SB_21340| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 177

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 306 AKCEFLNPGGSVKDRIASACFWMQ 235
           AK EFL PGGS   R A+    +Q
Sbjct: 52  AKIEFLQPGGSTSSRAAATAVELQ 75


>SB_12831| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 152

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 306 AKCEFLNPGGSVKDRIASACFWMQ 235
           AK EFL PGGS   R A+    +Q
Sbjct: 28  AKIEFLQPGGSTSSRAAATAVELQ 51


>SB_51123| Best HMM Match : PDZ (HMM E-Value=3.8e-18)
          Length = 182

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -1

Query: 214 PGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSD 98
           PG+  ++E   G+TG+GL++          IV+ E   D
Sbjct: 24  PGQECLIEIPKGSTGLGLSIVGGADTLLGTIVIHEVYED 62


>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 355

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -1

Query: 211 GKSVIVEPTSGNTGIG--LALAAAVRGYRCIIVLPEKMSDEK 92
           GK+VIV  T  N+GIG   AL  A RG R I+   +  S EK
Sbjct: 68  GKTVIV--TGANSGIGKATALELARRGARVIMACRDLESAEK 107


>SB_40804| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1044

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 396 VPSDFDPVPLQCEACPLV*RIFSQSSMCHF*HPH 497
           +P ++ P+ L C +C L+  I S+  M H    H
Sbjct: 679 IPGNYRPISLTCISCKLLEHIVSKHIMDHLSRHH 712


>SB_29646| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 152

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 309 YAKCEFLNPGGSVKDRIASACFWMQ 235
           + K EFL PGGS   R A+    +Q
Sbjct: 27  FCKIEFLQPGGSTSSRAAATAVELQ 51


>SB_27934| Best HMM Match : Complex1_30kDa (HMM E-Value=1.2)
          Length = 385

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 401 RYIQIFXM*SEIHHW*SYPNYLKMKD*NVK 312
           RY Q+F + S  HHW  + N+++  D NV+
Sbjct: 188 RY-QLFRLESGFHHWVQHVNFIQYFDLNVE 216


>SB_23505| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 149

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 330 EGLKCEM-YAKCEFLNPGGSVKDRIASACFWMQ 235
           EG K +  + K EFL PGGS   R A+    +Q
Sbjct: 15  EGKKLKYTWQKIEFLQPGGSTSSRAAATAVELQ 47


>SB_50456| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 168

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 324 LKCEMYAKCEFLNPGGSVKDRIASACFWMQ 235
           L+ +M    EFL PGGS   R A+    +Q
Sbjct: 37  LRFQMKTDIEFLQPGGSTSSRAAATAVELQ 66


>SB_46356| Best HMM Match : Adeno_VII (HMM E-Value=8)
          Length = 141

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 333 DEGLKCEMYAK-CEFLNPGGSVKDRIASACFWMQ 235
           D G K   +A+  EFL PGGS   R A+    +Q
Sbjct: 6   DGGTKVTAWARRIEFLQPGGSTSSRAAATAVELQ 39


>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
          Length = 436

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -2

Query: 378 VIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIASACFWMQ 235
           V  N P+ + S + +++    E     EFL PGGS   R A+    +Q
Sbjct: 287 VHANIPVFERSFIDRNKERIPEDQLSIEFLQPGGSTSSRAAATAVELQ 334


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,680,884
Number of Sequences: 59808
Number of extensions: 391204
Number of successful extensions: 1600
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1598
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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